RNA–Protein interactions for RNA: ENST00000443345.2

PDCD2-203, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 1,897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-203ENST00000443345 NEXMIFQ5QGS0 1516 aa29.81■■■□□ 2.36
PDCD2-203ENST00000443345 NRXN1Q9ULB1 1477 aa29.81■■■□□ 2.36
PDCD2-203ENST00000443345 STAG3Q9UJ98 1225 aa29.8■■■□□ 2.36
PDCD2-203ENST00000443345 GPRASP1Q5JY77 1395 aa29.8■■■□□ 2.36
PDCD2-203ENST00000443345 ADAMTSL3P82987 1691 aa29.8■■■□□ 2.36
PDCD2-203ENST00000443345 USP47Q96K76 1375 aa29.79■■■□□ 2.36
PDCD2-203ENST00000443345 DIEXFQ68CQ4 756 aaKnown RBP29.78■■■□□ 2.36
PDCD2-203ENST00000443345 RIMS1Q86UR5 1692 aaKnown RBP29.77■■■□□ 2.36
PDCD2-203ENST00000443345 A2ML1A8K2U0 1454 aa29.77■■■□□ 2.36
PDCD2-203ENST00000443345 PLPPR3Q6T4P5 718 aa29.76■■■□□ 2.35
PDCD2-203ENST00000443345 LAMC1P11047 1609 aa29.75■■■□□ 2.35
PDCD2-203ENST00000443345 VGFO15240 615 aaPredicted RBP29.75■■■□□ 2.35
PDCD2-203ENST00000443345 KIAA1210Q9ULL0 1709 aa29.75■■■□□ 2.35
PDCD2-203ENST00000443345 NUTM2DQ5VT03 806 aaPredicted RBP29.74■■■□□ 2.35
PDCD2-203ENST00000443345 PIK3C2GO75747 1445 aa29.72■■■□□ 2.35
PDCD2-203ENST00000443345 CFAP70Q5T0N1 1121 aa29.72■■■□□ 2.35
PDCD2-203ENST00000443345 ZFYVE9O95405 1425 aa29.72■■■□□ 2.35
PDCD2-203ENST00000443345 NLRP1Q9C000 1473 aa29.7■■■□□ 2.35
PDCD2-203ENST00000443345 KDM5AP29375 1690 aaKnown RBP29.69■■■□□ 2.34
PDCD2-203ENST00000443345 UBR1Q8IWV7 1749 aa29.67■■■□□ 2.34
PDCD2-203ENST00000443345 C14orf93Q9H972 538 aaKnown RBP29.65■■■□□ 2.34
PDCD2-203ENST00000443345 ST20-MTHFSA0A0A6YYL1 179 aa29.65■■■□□ 2.34
PDCD2-203ENST00000443345 RIMS2Q9UQ26 1411 aa29.64■■■□□ 2.34
PDCD2-203ENST00000443345 C11orf95C9JLR9 678 aaPredicted RBP29.62■■■□□ 2.33
PDCD2-203ENST00000443345 IQGAP1P46940 1657 aa29.61■■■□□ 2.33
PDCD2-203ENST00000443345 WASHC2AQ641Q2 1341 aa29.6■■■□□ 2.33
PDCD2-203ENST00000443345 SETBP1Q9Y6X0 1596 aa29.6■■■□□ 2.33
PDCD2-203ENST00000443345 SCAF11Q99590 1463 aaKnown RBP29.59■■■□□ 2.33
PDCD2-203ENST00000443345 MYO3AQ8NEV4 1616 aa29.58■■■□□ 2.33
PDCD2-203ENST00000443345 DDX10Q13206 875 aaKnown RBP29.57■■■□□ 2.32
PDCD2-203ENST00000443345 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.57■■■□□ 2.32
PDCD2-203ENST00000443345 TMEM2Q9UHN6 1383 aa29.57■■■□□ 2.32
PDCD2-203ENST00000443345 SENP3Q9H4L4 574 aaPredicted RBP29.55■■■□□ 2.32
PDCD2-203ENST00000443345 ADGRB1O14514 1584 aa29.55■■■□□ 2.32
PDCD2-203ENST00000443345 POLR1AO95602 1720 aaPredicted RBP29.55■■■□□ 2.32
PDCD2-203ENST00000443345 CCDC7Q96M83 1385 aa29.54■■■□□ 2.32
PDCD2-203ENST00000443345 HDGFP51858 240 aaKnown RBP29.54■■■□□ 2.32
PDCD2-203ENST00000443345 TMEM132EQ6IEE7 984 aa29.53■■■□□ 2.32
PDCD2-203ENST00000443345 PTPRMP28827 1452 aa29.53■■■□□ 2.32
PDCD2-203ENST00000443345 KIF7Q2M1P5 1343 aa29.52■■■□□ 2.32
PDCD2-203ENST00000443345 TESK2Q96S53 571 aa29.49■■■□□ 2.31
PDCD2-203ENST00000443345 CEP170BQ9Y4F5 1589 aaPredicted RBP29.49■■■□□ 2.31
PDCD2-203ENST00000443345 ALKQ9UM73 1620 aa29.49■■■□□ 2.31
PDCD2-203ENST00000443345 THEMISQ8N1K5 641 aaPredicted RBP29.48■■■□□ 2.31
PDCD2-203ENST00000443345 EIF3AQ14152 1382 aaKnown RBP29.48■■■□□ 2.31
PDCD2-203ENST00000443345 SETD1BQ9UPS6 1966 aaKnown RBP29.46■■■□□ 2.31
PDCD2-203ENST00000443345 SLIT1O75093 1534 aa29.46■■■□□ 2.31
PDCD2-203ENST00000443345 ARHGAP23Q9P227 1491 aa29.45■■■□□ 2.31
PDCD2-203ENST00000443345 ASXL1Q8IXJ9 1541 aa29.45■■■□□ 2.3
PDCD2-203ENST00000443345 LTKP29376 864 aa29.44■■■□□ 2.3
PDCD2-203ENST00000443345 TRAK1Q9UPV9 953 aa29.44■■■□□ 2.3
PDCD2-203ENST00000443345 NRXN3Q9Y4C0 1643 aa29.44■■■□□ 2.3
PDCD2-203ENST00000443345 TXNDC2Q86VQ3 553 aa29.43■■■□□ 2.3
PDCD2-203ENST00000443345 ZNF142P52746 1687 aaPredicted RBP29.42■■■□□ 2.3
PDCD2-203ENST00000443345 EID1Q9Y6B2 187 aa29.42■■■□□ 2.3
PDCD2-203ENST00000443345 SETD1AO15047 1707 aaKnown RBP29.4■■■□□ 2.3
PDCD2-203ENST00000443345 POLR3GLQ9BT43 218 aa29.38■■■□□ 2.29
PDCD2-203ENST00000443345 DISP3Q9P2K9 1392 aa29.38■■■□□ 2.29
PDCD2-203ENST00000443345 PLEKHG1Q9ULL1 1385 aa29.38■■■□□ 2.29
PDCD2-203ENST00000443345 TMF1P82094 1093 aa29.37■■■□□ 2.29
PDCD2-203ENST00000443345 MIER1Q8N108 512 aa29.36■■■□□ 2.29
PDCD2-203ENST00000443345 BCANQ96GW7 911 aa29.36■■■□□ 2.29
PDCD2-203ENST00000443345 YTHDC2Q9H6S0 1430 aaKnown RBP29.36■■■□□ 2.29
PDCD2-203ENST00000443345 STK26Q9P289 416 aa29.36■■■□□ 2.29
PDCD2-203ENST00000443345 ARHGEF28Q8N1W1 1705 aaKnown RBP29.35■■■□□ 2.29
PDCD2-203ENST00000443345 CENPJQ9HC77 1338 aaPredicted RBP29.35■■■□□ 2.29
PDCD2-203ENST00000443345 KDM4FA0A1W2PPD8 638 aa29.32■■■□□ 2.28
PDCD2-203ENST00000443345 ADAMTS13Q76LX8 1427 aa29.31■■■□□ 2.28
PDCD2-203ENST00000443345 METP08581 1390 aa29.31■■■□□ 2.28
PDCD2-203ENST00000443345 SBNO2Q9Y2G9 1366 aa29.3■■■□□ 2.28
PDCD2-203ENST00000443345 SLC24A1O60721 1099 aa29.29■■■□□ 2.28
PDCD2-203ENST00000443345 QRICH2Q9H0J4 1663 aa29.29■■■□□ 2.28
PDCD2-203ENST00000443345 LRPPRCP42704 1394 aaKnown RBP29.28■■■□□ 2.28
PDCD2-203ENST00000443345 MED14O60244 1454 aa29.26■■■□□ 2.27
PDCD2-203ENST00000443345 ANKLE2Q86XL3 938 aa29.25■■■□□ 2.27
PDCD2-203ENST00000443345 CDCA8Q53HL2 280 aa29.24■■■□□ 2.27
PDCD2-203ENST00000443345 SLC26A8Q96RN1 970 aa29.24■■■□□ 2.27
PDCD2-203ENST00000443345 ABCC11Q96J66 1382 aa29.24■■■□□ 2.27
PDCD2-203ENST00000443345 PRAM1Q96QH2 718 aa29.22■■■□□ 2.27
PDCD2-203ENST00000443345 DLC1Q96QB1 1528 aa29.22■■■□□ 2.27
PDCD2-203ENST00000443345 SAFB2Q14151 953 aaKnown RBP eCLIP29.21■■■□□ 2.27
PDCD2-203ENST00000443345 TBX22Q9Y458 520 aa29.21■■■□□ 2.27
PDCD2-203ENST00000443345 POGKQ9P215 609 aa29.2■■■□□ 2.26
PDCD2-203ENST00000443345 DIP2AQ14689 1571 aa29.18■■■□□ 2.26
PDCD2-203ENST00000443345 KNDC1Q76NI1 1749 aa29.17■■■□□ 2.26
PDCD2-203ENST00000443345 ANP32CO43423 234 aa29.17■■■□□ 2.26
PDCD2-203ENST00000443345 TECPR2O15040 1411 aa29.16■■■□□ 2.26
PDCD2-203ENST00000443345 WAPLQ7Z5K2 1190 aa29.14■■■□□ 2.26
PDCD2-203ENST00000443345 SIRT1Q96EB6 747 aa29.12■■■□□ 2.25
PDCD2-203ENST00000443345 CPS1P31327 1500 aa29.12■■■□□ 2.25
PDCD2-203ENST00000443345 TULP4Q9NRJ4 1543 aa29.12■■■□□ 2.25
PDCD2-203ENST00000443345 PTPRUQ92729 1446 aa29.12■■■□□ 2.25
PDCD2-203ENST00000443345 PLEKHH1Q9ULM0 1364 aa29.12■■■□□ 2.25
PDCD2-203ENST00000443345 EVC2Q86UK5 1308 aa29.12■■■□□ 2.25
PDCD2-203ENST00000443345 MINK1Q8N4C8 1332 aaPredicted RBP29.11■■■□□ 2.25
PDCD2-203ENST00000443345 FAM135BQ49AJ0 1406 aa29.11■■■□□ 2.25
PDCD2-203ENST00000443345 MYOM1P52179 1685 aa29.1■■■□□ 2.25
PDCD2-203ENST00000443345 PANK3Q9H999 370 aa29.08■■■□□ 2.25
PDCD2-203ENST00000443345 ROBO2Q9HCK4 1378 aa29.07■■■□□ 2.24
PDCD2-203ENST00000443345 NCKAP5LQ9HCH0 1330 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms