RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 HIRIP3Q9BW71 556 aaPredicted RBP10.17□□□□□ -0.78
CDC42BPA-208ENST00000442054 E9PCH4 1651 aa10.17□□□□□ -0.78
CDC42BPA-208ENST00000442054 MADDQ8WXG6 1647 aa10.16□□□□□ -0.78
CDC42BPA-208ENST00000442054 PSME1Q06323 249 aa10.16□□□□□ -0.78
CDC42BPA-208ENST00000442054 SOX12O15370 315 aa10.15□□□□□ -0.78
CDC42BPA-208ENST00000442054 KCNA6P17658 529 aa10.15□□□□□ -0.78
CDC42BPA-208ENST00000442054 KDM5CP41229 1560 aa10.15□□□□□ -0.78
CDC42BPA-208ENST00000442054 DISP3Q9P2K9 1392 aa10.15□□□□□ -0.79
CDC42BPA-208ENST00000442054 MINK1Q8N4C8 1332 aaPredicted RBP10.15□□□□□ -0.79
CDC42BPA-208ENST00000442054 CARD11Q9BXL7 1154 aa10.14□□□□□ -0.79
CDC42BPA-208ENST00000442054 CFAP65Q6ZU64 1925 aaKnown RBP10.14□□□□□ -0.79
CDC42BPA-208ENST00000442054 NPHP4O75161 1426 aaPredicted RBP10.14□□□□□ -0.79
CDC42BPA-208ENST00000442054 DIP2CQ9Y2E4 1556 aa10.14□□□□□ -0.79
CDC42BPA-208ENST00000442054 NPATQ14207 1427 aa10.13□□□□□ -0.79
CDC42BPA-208ENST00000442054 RIMS2Q9UQ26 1411 aa10.13□□□□□ -0.79
CDC42BPA-208ENST00000442054 C11orf95C9JLR9 678 aaPredicted RBP10.13□□□□□ -0.79
CDC42BPA-208ENST00000442054 CFAP70Q5T0N1 1121 aa10.13□□□□□ -0.79
CDC42BPA-208ENST00000442054 SETD1BQ9UPS6 1966 aaKnown RBP10.13□□□□□ -0.79
CDC42BPA-208ENST00000442054 RPGRIP1LQ68CZ1 1315 aa10.13□□□□□ -0.79
CDC42BPA-208ENST00000442054 C19orf44Q9H6X5 657 aa10.13□□□□□ -0.79
CDC42BPA-208ENST00000442054 TBX22Q9Y458 520 aa10.13□□□□□ -0.79
CDC42BPA-208ENST00000442054 TMEM2Q9UHN6 1383 aa10.13□□□□□ -0.79
CDC42BPA-208ENST00000442054 ZMYM4Q5VZL5 1548 aa10.12□□□□□ -0.79
CDC42BPA-208ENST00000442054 UGGT1Q9NYU2 1555 aa10.12□□□□□ -0.79
CDC42BPA-208ENST00000442054 CDC42BPBQ9Y5S2 1711 aa10.12□□□□□ -0.79
CDC42BPA-208ENST00000442054 SHANK2Q9UPX8 1470 aa10.11□□□□□ -0.79
CDC42BPA-208ENST00000442054 ADAMTS2O95450 1211 aa10.11□□□□□ -0.79
CDC42BPA-208ENST00000442054 XPCQ01831 940 aaPredicted RBP10.11□□□□□ -0.79
CDC42BPA-208ENST00000442054 AGLP35573 1532 aa10.11□□□□□ -0.79
CDC42BPA-208ENST00000442054 NLRP1Q9C000 1473 aa10.1□□□□□ -0.79
CDC42BPA-208ENST00000442054 NGLY1Q96IV0 654 aa10.1□□□□□ -0.79
CDC42BPA-208ENST00000442054 RTN4Q9NQC3 1192 aaKnown RBP10.1□□□□□ -0.79
CDC42BPA-208ENST00000442054 SLAIN2Q9P270 581 aa10.1□□□□□ -0.79
CDC42BPA-208ENST00000442054 A2ML1A8K2U0 1454 aa10.09□□□□□ -0.79
CDC42BPA-208ENST00000442054 ARHGEF5Q12774 1597 aa10.09□□□□□ -0.79
CDC42BPA-208ENST00000442054 FOXO3O43524 673 aa10.09□□□□□ -0.79
CDC42BPA-208ENST00000442054 PMFBP1Q8TBY8 1022 aa10.09□□□□□ -0.79
CDC42BPA-208ENST00000442054 NBPF8Q3BBV2 869 aa10.09□□□□□ -0.79
CDC42BPA-208ENST00000442054 WAPLQ7Z5K2 1190 aa10.09□□□□□ -0.79
CDC42BPA-208ENST00000442054 PRAM1Q96QH2 718 aa10.09□□□□□ -0.79
CDC42BPA-208ENST00000442054 TMEM94Q12767 1356 aa10.08□□□□□ -0.8
CDC42BPA-208ENST00000442054 CCDC7Q96M83 1385 aa10.08□□□□□ -0.8
CDC42BPA-208ENST00000442054 PPRC1Q5VV67 1664 aaKnown RBP10.08□□□□□ -0.8
CDC42BPA-208ENST00000442054 HSPA5P11021 654 aaKnown RBP10.08□□□□□ -0.8
CDC42BPA-208ENST00000442054 ABCA6Q8N139 1617 aa10.08□□□□□ -0.8
CDC42BPA-208ENST00000442054 CSB-PGBD3P0DP91 1061 aa10.07□□□□□ -0.8
CDC42BPA-208ENST00000442054 L3MBTL2Q969R5 705 aa10.07□□□□□ -0.8
CDC42BPA-208ENST00000442054 EVA1CP58658 441 aa10.06□□□□□ -0.8
CDC42BPA-208ENST00000442054 CCDC184Q52MB2 194 aa10.06□□□□□ -0.8
CDC42BPA-208ENST00000442054 ERVK-7P63135 1459 aa10.06□□□□□ -0.8
CDC42BPA-208ENST00000442054 SCAF11Q99590 1463 aaKnown RBP10.06□□□□□ -0.8
CDC42BPA-208ENST00000442054 STAC3Q96MF2 364 aa10.05□□□□□ -0.8
CDC42BPA-208ENST00000442054 RICTORQ6R327 1708 aa10.05□□□□□ -0.8
CDC42BPA-208ENST00000442054 CAMSAP1Q5T5Y3 1602 aa10.05□□□□□ -0.8
CDC42BPA-208ENST00000442054 HSPA1LP34931 641 aa10.05□□□□□ -0.8
CDC42BPA-208ENST00000442054 FER1L4A9Z1Z3 1794 aa10.05□□□□□ -0.8
CDC42BPA-208ENST00000442054 ADGRF5Q8IZF2 1346 aa10.05□□□□□ -0.8
CDC42BPA-208ENST00000442054 KIDINS220Q9ULH0 1771 aa10.04□□□□□ -0.8
CDC42BPA-208ENST00000442054 C8orf37Q96NL8 207 aa10.04□□□□□ -0.8
CDC42BPA-208ENST00000442054 MAST1Q9Y2H9 1570 aa10.04□□□□□ -0.8
CDC42BPA-208ENST00000442054 GPRASP1Q5JY77 1395 aa10.04□□□□□ -0.8
CDC42BPA-208ENST00000442054 UNC13BO14795 1591 aa10.04□□□□□ -0.8
CDC42BPA-208ENST00000442054 LAMC1P11047 1609 aa10.04□□□□□ -0.8
CDC42BPA-208ENST00000442054 TRPM1Q7Z4N2 1603 aa10.04□□□□□ -0.8
CDC42BPA-208ENST00000442054 LRRC59Q96AG4 307 aaKnown RBP10.03□□□□□ -0.8
CDC42BPA-208ENST00000442054 FRMPD1Q5SYB0 1578 aa10.03□□□□□ -0.8
CDC42BPA-208ENST00000442054 ROCK2O75116 1388 aaKnown RBP10.03□□□□□ -0.8
CDC42BPA-208ENST00000442054 NUTM2GQ5VZR2 741 aa10.03□□□□□ -0.8
CDC42BPA-208ENST00000442054 ABCC3O15438 1527 aa10.03□□□□□ -0.8
CDC42BPA-208ENST00000442054 NOS1P29475 1434 aa10.03□□□□□ -0.8
CDC42BPA-208ENST00000442054 RALGAPBQ86X10 1494 aa10.03□□□□□ -0.8
CDC42BPA-208ENST00000442054 PPM1GO15355 546 aaPredicted RBP10.03□□□□□ -0.8
CDC42BPA-208ENST00000442054 ANP32CO43423 234 aa10.02□□□□□ -0.8
CDC42BPA-208ENST00000442054 CDCA8Q53HL2 280 aa10.02□□□□□ -0.8
CDC42BPA-208ENST00000442054 HDGFL2Q7Z4V5 671 aaPredicted RBP10.02□□□□□ -0.8
CDC42BPA-208ENST00000442054 CLTCQ00610 1675 aaKnown RBP10.02□□□□□ -0.81
CDC42BPA-208ENST00000442054 FKBP8Q14318 412 aa10.01□□□□□ -0.81
CDC42BPA-208ENST00000442054 EFCAB6Q5THR3 1501 aa10.01□□□□□ -0.81
CDC42BPA-208ENST00000442054 ADRA2BP18089 450 aa10.01□□□□□ -0.81
CDC42BPA-208ENST00000442054 USP35Q9P2H5 1018 aa10.01□□□□□ -0.81
CDC42BPA-208ENST00000442054 SF3B2Q13435 895 aaKnown RBP10.01□□□□□ -0.81
CDC42BPA-208ENST00000442054 PHF8Q9UPP1 1060 aa10□□□□□ -0.81
CDC42BPA-208ENST00000442054 PTPRTO14522 1441 aa10□□□□□ -0.81
CDC42BPA-208ENST00000442054 PRKRIP1Q9H875 184 aaPredicted RBP10□□□□□ -0.81
CDC42BPA-208ENST00000442054 KIF7Q2M1P5 1343 aa10□□□□□ -0.81
CDC42BPA-208ENST00000442054 NPHP3Q7Z494 1330 aa9.99□□□□□ -0.81
CDC42BPA-208ENST00000442054 ARHGAP31Q2M1Z3 1444 aa9.99□□□□□ -0.81
CDC42BPA-208ENST00000442054 RNF123Q5XPI4 1314 aa9.99□□□□□ -0.81
CDC42BPA-208ENST00000442054 CENPJQ9HC77 1338 aaPredicted RBP9.99□□□□□ -0.81
CDC42BPA-208ENST00000442054 EVC2Q86UK5 1308 aa9.99□□□□□ -0.81
CDC42BPA-208ENST00000442054 KRT28Q7Z3Y7 464 aa9.99□□□□□ -0.81
CDC42BPA-208ENST00000442054 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.99□□□□□ -0.81
CDC42BPA-208ENST00000442054 PRDM11Q9NQV5 511 aa9.99□□□□□ -0.81
CDC42BPA-208ENST00000442054 STRN4Q9NRL3 753 aa9.99□□□□□ -0.81
CDC42BPA-208ENST00000442054 ABTB2Q8N961 1025 aa9.98□□□□□ -0.81
CDC42BPA-208ENST00000442054 RNF17Q9BXT8 1623 aaKnown RBP9.98□□□□□ -0.81
CDC42BPA-208ENST00000442054 INO80Q9ULG1 1556 aaPredicted RBP9.98□□□□□ -0.81
CDC42BPA-208ENST00000442054 EIF3AQ14152 1382 aaKnown RBP9.98□□□□□ -0.81
CDC42BPA-208ENST00000442054 TMF1P82094 1093 aa9.98□□□□□ -0.81
CDC42BPA-208ENST00000442054 PLXNC1O60486 1568 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 306.1 ms