RNA–Protein interactions for RNA: ENST00000441517.6

SCAP-207, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,748 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-207ENST00000441517 DDRGK1Q96HY6 314 aa19.33■□□□□ 0.69
SCAP-207ENST00000441517 SMC4Q9NTJ3 1288 aa19.33■□□□□ 0.69
SCAP-207ENST00000441517 TNNQ9UQP3 1299 aa19.33■□□□□ 0.69
SCAP-207ENST00000441517 BACH2Q9BYV9 841 aa19.33■□□□□ 0.68
SCAP-207ENST00000441517 DMRT2Q9Y5R5 561 aa19.32■□□□□ 0.68
SCAP-207ENST00000441517 SPATA31E1Q6ZUB1 1445 aa19.32■□□□□ 0.68
SCAP-207ENST00000441517 RAPGEF6Q8TEU7 1601 aa19.32■□□□□ 0.68
SCAP-207ENST00000441517 IL27Q8NEV9 243 aa19.32■□□□□ 0.68
SCAP-207ENST00000441517 ADAMTS12P58397 1594 aa19.31■□□□□ 0.68
SCAP-207ENST00000441517 MFAP1P55081 439 aaKnown RBP19.31■□□□□ 0.68
SCAP-207ENST00000441517 HMOX1P09601 288 aa19.3■□□□□ 0.68
SCAP-207ENST00000441517 KIAA0556O60303 1618 aa19.29■□□□□ 0.68
SCAP-207ENST00000441517 TARBP1Q13395 1621 aaKnown RBP19.27■□□□□ 0.68
SCAP-207ENST00000441517 CCDC141Q6ZP82 1450 aa19.26■□□□□ 0.67
SCAP-207ENST00000441517 DUSP27Q5VZP5 1158 aa19.26■□□□□ 0.67
SCAP-207ENST00000441517 KDM5BQ9UGL1 1544 aa19.25■□□□□ 0.67
SCAP-207ENST00000441517 CENPQQ7L2Z9 268 aaPredicted RBP19.25■□□□□ 0.67
SCAP-207ENST00000441517 FAM161AQ3B820 660 aa19.25■□□□□ 0.67
SCAP-207ENST00000441517 LRRIQ1Q96JM4 1722 aa19.25■□□□□ 0.67
SCAP-207ENST00000441517 E9PSI1 815 aa19.24■□□□□ 0.67
SCAP-207ENST00000441517 THUMPD2Q9BTF0 503 aaKnown RBP19.23■□□□□ 0.67
SCAP-207ENST00000441517 FRAT2O75474 233 aaPredicted RBP19.22■□□□□ 0.67
SCAP-207ENST00000441517 AMER1Q5JTC6 1135 aaPredicted RBP19.22■□□□□ 0.67
SCAP-207ENST00000441517 PLEKHH1Q9ULM0 1364 aa19.22■□□□□ 0.67
SCAP-207ENST00000441517 CARD14Q9BXL6 1004 aa19.22■□□□□ 0.67
SCAP-207ENST00000441517 TRAPPC8Q9Y2L5 1435 aa19.21■□□□□ 0.67
SCAP-207ENST00000441517 SYCP2Q9BX26 1530 aa19.21■□□□□ 0.67
SCAP-207ENST00000441517 IGHDP01880 384 aa19.21■□□□□ 0.67
SCAP-207ENST00000441517 SLFN5Q08AF3 891 aa19.2■□□□□ 0.66
SCAP-207ENST00000441517 EIF3AQ14152 1382 aaKnown RBP19.2■□□□□ 0.66
SCAP-207ENST00000441517 NFKBIBQ15653 356 aa19.2■□□□□ 0.66
SCAP-207ENST00000441517 EIF4G3O43432 1585 aaKnown RBP19.2■□□□□ 0.66
SCAP-207ENST00000441517 C1orf115Q9H7X2 142 aa19.2■□□□□ 0.66
SCAP-207ENST00000441517 BRPF3Q9ULD4 1205 aa19.19■□□□□ 0.66
SCAP-207ENST00000441517 PRAG1Q86YV5 1406 aa19.19■□□□□ 0.66
SCAP-207ENST00000441517 RIPK4P57078 832 aa19.18■□□□□ 0.66
SCAP-207ENST00000441517 WWC1Q8IX03 1113 aa19.18■□□□□ 0.66
SCAP-207ENST00000441517 BECN1Q14457 450 aa19.18■□□□□ 0.66
SCAP-207ENST00000441517 EXOSC9Q06265 439 aaKnown RBP19.18■□□□□ 0.66
SCAP-207ENST00000441517 DNMT1P26358 1616 aaKnown RBP19.18■□□□□ 0.66
SCAP-207ENST00000441517 PBRM1Q86U86 1689 aa19.17■□□□□ 0.66
SCAP-207ENST00000441517 FBXO31Q5XUX0 539 aaPredicted RBP19.16■□□□□ 0.66
SCAP-207ENST00000441517 PRAM1Q96QH2 718 aa19.16■□□□□ 0.66
SCAP-207ENST00000441517 CGNL1Q0VF96 1302 aa19.16■□□□□ 0.66
SCAP-207ENST00000441517 ZNF428Q96B54 188 aa19.16■□□□□ 0.66
SCAP-207ENST00000441517 LNPKQ9C0E8 428 aa19.16■□□□□ 0.66
SCAP-207ENST00000441517 LMOD2Q6P5Q4 547 aa19.15■□□□□ 0.66
SCAP-207ENST00000441517 FAM135AQ9P2D6 1515 aa19.14■□□□□ 0.66
SCAP-207ENST00000441517 CEP170Q5SW79 1584 aa19.14■□□□□ 0.66
SCAP-207ENST00000441517 NECTIN2Q92692 538 aa19.14■□□□□ 0.66
SCAP-207ENST00000441517 RUNDC1Q96C34 613 aa19.14■□□□□ 0.66
SCAP-207ENST00000441517 RALGAPBQ86X10 1494 aa19.14■□□□□ 0.66
SCAP-207ENST00000441517 WAPLQ7Z5K2 1190 aa19.14■□□□□ 0.65
SCAP-207ENST00000441517 PARD3Q8TEW0 1356 aa19.13■□□□□ 0.65
SCAP-207ENST00000441517 CABP1Q9NZU7 370 aa19.13■□□□□ 0.65
SCAP-207ENST00000441517 MS4A1P11836 297 aa19.13■□□□□ 0.65
SCAP-207ENST00000441517 NCLP19338 710 aaKnown RBP19.13■□□□□ 0.65
SCAP-207ENST00000441517 MYH16Q9H6N6 1097 aa19.13■□□□□ 0.65
SCAP-207ENST00000441517 HDGFL2Q7Z4V5 671 aaPredicted RBP19.12■□□□□ 0.65
SCAP-207ENST00000441517 LTV1Q96GA3 475 aaPredicted RBP19.12■□□□□ 0.65
SCAP-207ENST00000441517 RWDD1Q9H446 243 aaPredicted RBP19.12■□□□□ 0.65
SCAP-207ENST00000441517 CFAP65Q6ZU64 1925 aaKnown RBP19.11■□□□□ 0.65
SCAP-207ENST00000441517 EVC2Q86UK5 1308 aa19.11■□□□□ 0.65
SCAP-207ENST00000441517 VGFO15240 615 aaPredicted RBP19.11■□□□□ 0.65
SCAP-207ENST00000441517 PDZRN3Q9UPQ7 1066 aa19.11■□□□□ 0.65
SCAP-207ENST00000441517 A2MP01023 1474 aa19.11■□□□□ 0.65
SCAP-207ENST00000441517 SEC24BO95487 1268 aa19.11■□□□□ 0.65
SCAP-207ENST00000441517 OSCARQ8IYS5 282 aa19.1■□□□□ 0.65
SCAP-207ENST00000441517 BCORL1Q5H9F3 1711 aa19.1■□□□□ 0.65
SCAP-207ENST00000441517 NSD3Q9BZ95 1437 aa19.09■□□□□ 0.65
SCAP-207ENST00000441517 ANKRD45Q5TZF3 282 aa19.09■□□□□ 0.65
SCAP-207ENST00000441517 NUTM2GQ5VZR2 741 aa19.09■□□□□ 0.65
SCAP-207ENST00000441517 SLC4A10Q6U841 1118 aa19.09■□□□□ 0.65
SCAP-207ENST00000441517 RLBP1P12271 317 aa19.09■□□□□ 0.65
SCAP-207ENST00000441517 ZKSCAN2Q63HK3 967 aa19.08■□□□□ 0.65
SCAP-207ENST00000441517 IDI1Q13907 227 aa19.08■□□□□ 0.64
SCAP-207ENST00000441517 DZIP1LQ8IYY4 767 aaKnown RBP19.08■□□□□ 0.64
SCAP-207ENST00000441517 DCTN1Q14203 1278 aa19.08■□□□□ 0.64
SCAP-207ENST00000441517 TERF2IPQ9NYB0 399 aa19.08■□□□□ 0.64
SCAP-207ENST00000441517 LRPPRCP42704 1394 aaKnown RBP19.07■□□□□ 0.64
SCAP-207ENST00000441517 FOXD4L5Q5VV16 416 aaPredicted RBP19.07■□□□□ 0.64
SCAP-207ENST00000441517 TXNDC2Q86VQ3 553 aa19.07■□□□□ 0.64
SCAP-207ENST00000441517 FOXD4L4Q8WXT5 416 aaPredicted RBP19.07■□□□□ 0.64
SCAP-207ENST00000441517 FAM69CQ0P6D2 419 aa19.06■□□□□ 0.64
SCAP-207ENST00000441517 GSE1Q14687 1217 aa19.06■□□□□ 0.64
SCAP-207ENST00000441517 RRS1Q15050 365 aaKnown RBP19.06■□□□□ 0.64
SCAP-207ENST00000441517 NOL8Q76FK4 1167 aaKnown RBP19.06■□□□□ 0.64
SCAP-207ENST00000441517 GCC2Q8IWJ2 1684 aa19.06■□□□□ 0.64
SCAP-207ENST00000441517 PRKAR2BP31323 418 aa19.05■□□□□ 0.64
SCAP-207ENST00000441517 PCDHB15Q9Y5E8 787 aa19.05■□□□□ 0.64
SCAP-207ENST00000441517 DIAPH1O60610 1272 aaKnown RBP19.05■□□□□ 0.64
SCAP-207ENST00000441517 NOB1Q9ULX3 412 aaKnown RBP19.05■□□□□ 0.64
SCAP-207ENST00000441517 HSP90AB1P08238 724 aaKnown RBP19.04■□□□□ 0.64
SCAP-207ENST00000441517 NOS1P29475 1434 aa19.04■□□□□ 0.64
SCAP-207ENST00000441517 PMFBP1Q8TBY8 1022 aa19.04■□□□□ 0.64
SCAP-207ENST00000441517 NCKAP5LQ9HCH0 1330 aa19.03■□□□□ 0.64
SCAP-207ENST00000441517 MBD5Q9P267 1494 aa19.03■□□□□ 0.64
SCAP-207ENST00000441517 RARSP54136 660 aaKnown RBP19.02■□□□□ 0.64
SCAP-207ENST00000441517 FOXD4L6Q3SYB3 417 aaPredicted RBP19.02■□□□□ 0.64
SCAP-207ENST00000441517 FOXD4L3Q6VB84 417 aaPredicted RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 281.1 ms