RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 NRXN1Q9ULB1 1477 aa28.41■■■□□ 2.14
VRK2-207ENST00000440705 TNRQ92752 1358 aa28.41■■■□□ 2.14
VRK2-207ENST00000440705 KIAA1210Q9ULL0 1709 aa28.41■■■□□ 2.14
VRK2-207ENST00000440705 ADGRF5Q8IZF2 1346 aa28.41■■■□□ 2.14
VRK2-207ENST00000440705 VGFO15240 615 aaPredicted RBP28.4■■■□□ 2.14
VRK2-207ENST00000440705 MYO5BQ9ULV0 1848 aa28.4■■■□□ 2.14
VRK2-207ENST00000440705 C3P01024 1663 aa28.39■■■□□ 2.13
VRK2-207ENST00000440705 NEXMIFQ5QGS0 1516 aa28.38■■■□□ 2.13
VRK2-207ENST00000440705 ZFYVE9O95405 1425 aa28.35■■■□□ 2.13
VRK2-207ENST00000440705 A2ML1A8K2U0 1454 aa28.33■■■□□ 2.13
VRK2-207ENST00000440705 CEBPAP49715 358 aaPredicted RBP28.33■■■□□ 2.13
VRK2-207ENST00000440705 PIK3C2GO75747 1445 aa28.33■■■□□ 2.13
VRK2-207ENST00000440705 KDM5AP29375 1690 aaKnown RBP28.31■■■□□ 2.12
VRK2-207ENST00000440705 ADAMTSL3P82987 1691 aa28.31■■■□□ 2.12
VRK2-207ENST00000440705 NLRP1Q9C000 1473 aa28.31■■■□□ 2.12
VRK2-207ENST00000440705 CFAP70Q5T0N1 1121 aa28.29■■■□□ 2.12
VRK2-207ENST00000440705 ST20-MTHFSA0A0A6YYL1 179 aa28.28■■■□□ 2.12
VRK2-207ENST00000440705 C14orf93Q9H972 538 aaKnown RBP28.28■■■□□ 2.12
VRK2-207ENST00000440705 RIMS1Q86UR5 1692 aaKnown RBP28.28■■■□□ 2.12
VRK2-207ENST00000440705 NUTM2DQ5VT03 806 aaPredicted RBP28.26■■■□□ 2.11
VRK2-207ENST00000440705 DDX10Q13206 875 aaKnown RBP28.25■■■□□ 2.11
VRK2-207ENST00000440705 SETBP1Q9Y6X0 1596 aa28.25■■■□□ 2.11
VRK2-207ENST00000440705 WASHC2AQ641Q2 1341 aa28.24■■■□□ 2.11
VRK2-207ENST00000440705 POLR1AO95602 1720 aaPredicted RBP28.24■■■□□ 2.11
VRK2-207ENST00000440705 SCAF11Q99590 1463 aaKnown RBP28.24■■■□□ 2.11
VRK2-207ENST00000440705 IQGAP1P46940 1657 aa28.24■■■□□ 2.11
VRK2-207ENST00000440705 HDGFP51858 240 aaKnown RBP28.23■■■□□ 2.11
VRK2-207ENST00000440705 RIMS2Q9UQ26 1411 aa28.22■■■□□ 2.11
VRK2-207ENST00000440705 UBR1Q8IWV7 1749 aa28.22■■■□□ 2.11
VRK2-207ENST00000440705 PLPPR3Q6T4P5 718 aa28.22■■■□□ 2.11
VRK2-207ENST00000440705 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.22■■■□□ 2.11
VRK2-207ENST00000440705 CCDC7Q96M83 1385 aa28.21■■■□□ 2.11
VRK2-207ENST00000440705 C11orf95C9JLR9 678 aaPredicted RBP28.21■■■□□ 2.11
VRK2-207ENST00000440705 EIF3AQ14152 1382 aaKnown RBP28.19■■■□□ 2.1
VRK2-207ENST00000440705 KIF7Q2M1P5 1343 aa28.17■■■□□ 2.1
VRK2-207ENST00000440705 TMEM2Q9UHN6 1383 aa28.16■■■□□ 2.1
VRK2-207ENST00000440705 ADGRB1O14514 1584 aa28.14■■■□□ 2.1
VRK2-207ENST00000440705 MYO3AQ8NEV4 1616 aa28.13■■■□□ 2.09
VRK2-207ENST00000440705 TESK2Q96S53 571 aa28.12■■■□□ 2.09
VRK2-207ENST00000440705 SLC24A1O60721 1099 aa28.1■■■□□ 2.09
VRK2-207ENST00000440705 TMEM132EQ6IEE7 984 aa28.1■■■□□ 2.09
VRK2-207ENST00000440705 THEMISQ8N1K5 641 aaPredicted RBP28.1■■■□□ 2.09
VRK2-207ENST00000440705 ALKQ9UM73 1620 aa28.09■■■□□ 2.09
VRK2-207ENST00000440705 SETD1BQ9UPS6 1966 aaKnown RBP28.08■■■□□ 2.09
VRK2-207ENST00000440705 TMF1P82094 1093 aa28.07■■■□□ 2.08
VRK2-207ENST00000440705 MIER1Q8N108 512 aa28.07■■■□□ 2.08
VRK2-207ENST00000440705 SLIT1O75093 1534 aa28.05■■■□□ 2.08
VRK2-207ENST00000440705 EID1Q9Y6B2 187 aa28.05■■■□□ 2.08
VRK2-207ENST00000440705 CEP170BQ9Y4F5 1589 aaPredicted RBP28.04■■■□□ 2.08
VRK2-207ENST00000440705 PTPRMP28827 1452 aa28.04■■■□□ 2.08
VRK2-207ENST00000440705 TRAK1Q9UPV9 953 aa28.04■■■□□ 2.08
VRK2-207ENST00000440705 ARHGAP23Q9P227 1491 aa28.04■■■□□ 2.08
VRK2-207ENST00000440705 POLR3GLQ9BT43 218 aa28.03■■■□□ 2.08
VRK2-207ENST00000440705 TXNDC2Q86VQ3 553 aa28.01■■■□□ 2.07
VRK2-207ENST00000440705 SENP3Q9H4L4 574 aaPredicted RBP28.01■■■□□ 2.07
VRK2-207ENST00000440705 ASXL1Q8IXJ9 1541 aa28.01■■■□□ 2.07
VRK2-207ENST00000440705 CENPJQ9HC77 1338 aaPredicted RBP28■■■□□ 2.07
VRK2-207ENST00000440705 CDCA8Q53HL2 280 aa28■■■□□ 2.07
VRK2-207ENST00000440705 ZNF142P52746 1687 aaPredicted RBP27.99■■■□□ 2.07
VRK2-207ENST00000440705 NRXN3Q9Y4C0 1643 aa27.99■■■□□ 2.07
VRK2-207ENST00000440705 DISP3Q9P2K9 1392 aa27.99■■■□□ 2.07
VRK2-207ENST00000440705 PLEKHG1Q9ULL1 1385 aa27.99■■■□□ 2.07
VRK2-207ENST00000440705 SBNO2Q9Y2G9 1366 aa27.99■■■□□ 2.07
VRK2-207ENST00000440705 LTKP29376 864 aa27.98■■■□□ 2.07
VRK2-207ENST00000440705 SETD1AO15047 1707 aaKnown RBP27.97■■■□□ 2.07
VRK2-207ENST00000440705 YTHDC2Q9H6S0 1430 aaKnown RBP27.97■■■□□ 2.07
VRK2-207ENST00000440705 BCANQ96GW7 911 aa27.97■■■□□ 2.07
VRK2-207ENST00000440705 ARHGEF28Q8N1W1 1705 aaKnown RBP27.96■■■□□ 2.07
VRK2-207ENST00000440705 ANP32CO43423 234 aa27.94■■■□□ 2.06
VRK2-207ENST00000440705 STK26Q9P289 416 aa27.94■■■□□ 2.06
VRK2-207ENST00000440705 QRICH2Q9H0J4 1663 aa27.92■■■□□ 2.06
VRK2-207ENST00000440705 LRPPRCP42704 1394 aaKnown RBP27.91■■■□□ 2.06
VRK2-207ENST00000440705 ADAMTS13Q76LX8 1427 aa27.89■■■□□ 2.06
VRK2-207ENST00000440705 METP08581 1390 aa27.88■■■□□ 2.05
VRK2-207ENST00000440705 ABCC11Q96J66 1382 aa27.88■■■□□ 2.05
VRK2-207ENST00000440705 DLC1Q96QB1 1528 aa27.87■■■□□ 2.05
VRK2-207ENST00000440705 MED14O60244 1454 aa27.85■■■□□ 2.05
VRK2-207ENST00000440705 ANKLE2Q86XL3 938 aa27.85■■■□□ 2.05
VRK2-207ENST00000440705 POGKQ9P215 609 aa27.84■■■□□ 2.05
VRK2-207ENST00000440705 TBX22Q9Y458 520 aa27.84■■■□□ 2.05
VRK2-207ENST00000440705 PRAM1Q96QH2 718 aa27.83■■■□□ 2.05
VRK2-207ENST00000440705 DIP2AQ14689 1571 aa27.82■■■□□ 2.04
VRK2-207ENST00000440705 SIRT1Q96EB6 747 aa27.81■■■□□ 2.04
VRK2-207ENST00000440705 EVC2Q86UK5 1308 aa27.8■■■□□ 2.04
VRK2-207ENST00000440705 KNDC1Q76NI1 1749 aa27.8■■■□□ 2.04
VRK2-207ENST00000440705 PUS7Q96PZ0 661 aaKnown RBP27.8■■■□□ 2.04
VRK2-207ENST00000440705 TECPR2O15040 1411 aa27.79■■■□□ 2.04
VRK2-207ENST00000440705 SLC26A8Q96RN1 970 aa27.79■■■□□ 2.04
VRK2-207ENST00000440705 KDM4FA0A1W2PPD8 638 aa27.78■■■□□ 2.04
VRK2-207ENST00000440705 SAFB2Q14151 953 aaKnown RBP eCLIP27.78■■■□□ 2.04
VRK2-207ENST00000440705 FAM135BQ49AJ0 1406 aa27.76■■■□□ 2.03
VRK2-207ENST00000440705 PANK3Q9H999 370 aa27.75■■■□□ 2.03
VRK2-207ENST00000440705 CPS1P31327 1500 aa27.74■■■□□ 2.03
VRK2-207ENST00000440705 CCER2I3L3R5 266 aa27.74■■■□□ 2.03
VRK2-207ENST00000440705 TULP4Q9NRJ4 1543 aa27.73■■■□□ 2.03
VRK2-207ENST00000440705 WAPLQ7Z5K2 1190 aa27.72■■■□□ 2.03
VRK2-207ENST00000440705 PRKRIP1Q9H875 184 aaPredicted RBP27.72■■■□□ 2.03
VRK2-207ENST00000440705 MINK1Q8N4C8 1332 aaPredicted RBP27.72■■■□□ 2.03
VRK2-207ENST00000440705 MYOM1P52179 1685 aa27.71■■■□□ 2.03
VRK2-207ENST00000440705 PIK3R4Q99570 1358 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms