RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 CHIC2Q9UKJ5 165 aa13.03□□□□□ -0.32
HDAC6-209ENST00000440653 INO80Q9ULG1 1556 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-209ENST00000440653 LTKP29376 864 aa13.02□□□□□ -0.33
HDAC6-209ENST00000440653 SPATA31A6Q5VVP1 1343 aa13.02□□□□□ -0.33
HDAC6-209ENST00000440653 COL16A1Q07092 1604 aaPredicted RBP13.02□□□□□ -0.33
HDAC6-209ENST00000440653 PPP1R15AO75807 674 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-209ENST00000440653 SIN3AQ96ST3 1273 aa13.01□□□□□ -0.33
HDAC6-209ENST00000440653 ZNF644Q9H582 1327 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-209ENST00000440653 IQGAP3Q86VI3 1631 aa13.01□□□□□ -0.33
HDAC6-209ENST00000440653 ANKRD30BQ9BXX2 1392 aa13□□□□□ -0.33
HDAC6-209ENST00000440653 AFF2P51816 1311 aa13□□□□□ -0.33
HDAC6-209ENST00000440653 NEUROD1Q13562 356 aa13□□□□□ -0.33
HDAC6-209ENST00000440653 SLAIN2Q9P270 581 aa13□□□□□ -0.33
HDAC6-209ENST00000440653 DUOX2Q9NRD8 1548 aa12.99□□□□□ -0.33
HDAC6-209ENST00000440653 KIF15Q9NS87 1388 aa12.99□□□□□ -0.33
HDAC6-209ENST00000440653 PROSER2Q86WR7 435 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-209ENST00000440653 MPHOSPH9Q99550 1183 aa12.98□□□□□ -0.33
HDAC6-209ENST00000440653 SCAF11Q99590 1463 aaKnown RBP12.97□□□□□ -0.33
HDAC6-209ENST00000440653 ERBINQ96RT1 1412 aa12.97□□□□□ -0.33
HDAC6-209ENST00000440653 WASHC2CQ9Y4E1 1318 aa12.97□□□□□ -0.33
HDAC6-209ENST00000440653 KIF3BO15066 747 aa12.97□□□□□ -0.33
HDAC6-209ENST00000440653 IFFO2Q5TF58 517 aa12.97□□□□□ -0.33
HDAC6-209ENST00000440653 TXNDC2Q86VQ3 553 aa12.97□□□□□ -0.33
HDAC6-209ENST00000440653 FOXD1Q16676 465 aa12.96□□□□□ -0.33
HDAC6-209ENST00000440653 QTRT2Q9H974 415 aaKnown RBP12.96□□□□□ -0.33
HDAC6-209ENST00000440653 EIF2AK4Q9P2K8 1649 aaKnown RBP12.95□□□□□ -0.34
HDAC6-209ENST00000440653 TSPY4P0CV99 314 aa12.95□□□□□ -0.34
HDAC6-209ENST00000440653 TSPY10P0CW01 314 aa12.95□□□□□ -0.34
HDAC6-209ENST00000440653 RBM6P78332 1123 aaKnown RBP12.95□□□□□ -0.34
HDAC6-209ENST00000440653 EP400Q96L91 3159 aa12.94□□□□□ -0.34
HDAC6-209ENST00000440653 ATAD2Q6PL18 1390 aa12.94□□□□□ -0.34
HDAC6-209ENST00000440653 KCNA6P17658 529 aa12.93□□□□□ -0.34
HDAC6-209ENST00000440653 DHX29Q7Z478 1369 aaKnown RBP12.93□□□□□ -0.34
HDAC6-209ENST00000440653 SHPRHQ149N8 1683 aa12.93□□□□□ -0.34
HDAC6-209ENST00000440653 UBR1Q8IWV7 1749 aa12.92□□□□□ -0.34
HDAC6-209ENST00000440653 MIER1Q8N108 512 aa12.92□□□□□ -0.34
HDAC6-209ENST00000440653 SLC4A1APQ9BWU0 796 aaKnown RBP12.92□□□□□ -0.34
HDAC6-209ENST00000440653 RTEL1-TNFRSF6BF6WH68 1400 aa12.91□□□□□ -0.34
HDAC6-209ENST00000440653 MSH6P52701 1360 aa12.91□□□□□ -0.34
HDAC6-209ENST00000440653 ARHGAP23Q9P227 1491 aa12.91□□□□□ -0.34
HDAC6-209ENST00000440653 PRDM15P57071 1507 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-209ENST00000440653 SLC26A8Q96RN1 970 aa12.89□□□□□ -0.35
HDAC6-209ENST00000440653 LRP5O75197 1615 aa12.88□□□□□ -0.35
HDAC6-209ENST00000440653 LAMC1P11047 1609 aa12.88□□□□□ -0.35
HDAC6-209ENST00000440653 C8orf37Q96NL8 207 aa12.88□□□□□ -0.35
HDAC6-209ENST00000440653 RALGAPBQ86X10 1494 aa12.88□□□□□ -0.35
HDAC6-209ENST00000440653 SLIT1O75093 1534 aa12.88□□□□□ -0.35
HDAC6-209ENST00000440653 NUP155O75694 1391 aa12.87□□□□□ -0.35
HDAC6-209ENST00000440653 CFAP65Q6ZU64 1925 aaKnown RBP12.87□□□□□ -0.35
HDAC6-209ENST00000440653 TET3O43151 1660 aa12.86□□□□□ -0.35
HDAC6-209ENST00000440653 ERVK-7P63135 1459 aa12.86□□□□□ -0.35
HDAC6-209ENST00000440653 EID1Q9Y6B2 187 aa12.86□□□□□ -0.35
HDAC6-209ENST00000440653 DIP2AQ14689 1571 aa12.86□□□□□ -0.35
HDAC6-209ENST00000440653 AHDC1Q5TGY3 1603 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-209ENST00000440653 YY1P25490 414 aa12.85□□□□□ -0.35
HDAC6-209ENST00000440653 SPHKAPQ2M3C7 1700 aa12.84□□□□□ -0.35
HDAC6-209ENST00000440653 CEP152O94986 1710 aa12.83□□□□□ -0.36
HDAC6-209ENST00000440653 NGLY1Q96IV0 654 aa12.83□□□□□ -0.36
HDAC6-209ENST00000440653 KDM5AP29375 1690 aaKnown RBP12.83□□□□□ -0.36
HDAC6-209ENST00000440653 TRPM1Q7Z4N2 1603 aa12.82□□□□□ -0.36
HDAC6-209ENST00000440653 EIF4G2P78344 907 aaKnown RBP eCLIP12.82□□□□□ -0.36
HDAC6-209ENST00000440653 DEFB132Q7Z7B7 95 aa12.82□□□□□ -0.36
HDAC6-209ENST00000440653 CCDC125Q86Z20 511 aa12.82□□□□□ -0.36
HDAC6-209ENST00000440653 TRPM2O94759 1503 aa12.82□□□□□ -0.36
HDAC6-209ENST00000440653 CCDC144AA2RUR9 1427 aa12.81□□□□□ -0.36
HDAC6-209ENST00000440653 NKTRP30414 1462 aaKnown RBP12.81□□□□□ -0.36
HDAC6-209ENST00000440653 L3MBTL2Q969R5 705 aa12.81□□□□□ -0.36
HDAC6-209ENST00000440653 NWD1Q149M9 1564 aa12.81□□□□□ -0.36
HDAC6-209ENST00000440653 ABCC3O15438 1527 aa12.8□□□□□ -0.36
HDAC6-209ENST00000440653 PSDA5PKW4 1024 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-209ENST00000440653 TMEM2Q9UHN6 1383 aa12.8□□□□□ -0.36
HDAC6-209ENST00000440653 E9PCH4 1651 aa12.8□□□□□ -0.36
HDAC6-209ENST00000440653 SPATA31E1Q6ZUB1 1445 aa12.79□□□□□ -0.36
HDAC6-209ENST00000440653 CCER2I3L3R5 266 aa12.78□□□□□ -0.36
HDAC6-209ENST00000440653 BRINP3Q76B58 766 aa12.78□□□□□ -0.36
HDAC6-209ENST00000440653 ADAMTS2O95450 1211 aa12.77□□□□□ -0.37
HDAC6-209ENST00000440653 MROH1Q8NDA8 1641 aa12.77□□□□□ -0.37
HDAC6-209ENST00000440653 ANP32CO43423 234 aa12.76□□□□□ -0.37
HDAC6-209ENST00000440653 PIK3C2BO00750 1634 aa12.75□□□□□ -0.37
HDAC6-209ENST00000440653 HSPA5P11021 654 aaKnown RBP12.75□□□□□ -0.37
HDAC6-209ENST00000440653 EFCAB6Q5THR3 1501 aa12.75□□□□□ -0.37
HDAC6-209ENST00000440653 C14orf37Q86TY3 774 aa12.75□□□□□ -0.37
HDAC6-209ENST00000440653 LMTK2Q8IWU2 1503 aa12.75□□□□□ -0.37
HDAC6-209ENST00000440653 USP21Q9UK80 565 aa12.75□□□□□ -0.37
HDAC6-209ENST00000440653 CCDC7Q96M83 1385 aa12.74□□□□□ -0.37
HDAC6-209ENST00000440653 DDX10Q13206 875 aaKnown RBP12.74□□□□□ -0.37
HDAC6-209ENST00000440653 YTHDC1Q96MU7 727 aaKnown RBP12.74□□□□□ -0.37
HDAC6-209ENST00000440653 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-209ENST00000440653 NHSL1Q5SYE7 1610 aa12.73□□□□□ -0.37
HDAC6-209ENST00000440653 USP47Q96K76 1375 aa12.73□□□□□ -0.37
HDAC6-209ENST00000440653 DDX17Q92841 729 aaKnown RBP12.73□□□□□ -0.37
HDAC6-209ENST00000440653 BCANQ96GW7 911 aa12.73□□□□□ -0.37
HDAC6-209ENST00000440653 TRPC5Q9UL62 973 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-209ENST00000440653 KIAA1210Q9ULL0 1709 aa12.73□□□□□ -0.37
HDAC6-209ENST00000440653 PRAG1Q86YV5 1406 aa12.72□□□□□ -0.37
HDAC6-209ENST00000440653 ROCK2O75116 1388 aaKnown RBP12.72□□□□□ -0.37
HDAC6-209ENST00000440653 KANK1Q14678 1352 aa12.72□□□□□ -0.37
HDAC6-209ENST00000440653 PNPLA6Q8IY17 1366 aa12.72□□□□□ -0.37
HDAC6-209ENST00000440653 ATF3P18847 181 aa12.72□□□□□ -0.37
HDAC6-209ENST00000440653 CADPS2Q86UW7 1296 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms