RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 RRP9O43818 475 aaKnown RBP23.19■■□□□ 1.3
KCNC4-204ENST00000438661 BLMP54132 1417 aaPredicted RBP23.17■■□□□ 1.3
KCNC4-204ENST00000438661 CANXP27824 592 aaKnown RBP23.16■■□□□ 1.3
KCNC4-204ENST00000438661 ANTXR1Q9H6X2 564 aa23.16■■□□□ 1.3
KCNC4-204ENST00000438661 UPF2Q9HAU5 1272 aaKnown RBP23.16■■□□□ 1.3
KCNC4-204ENST00000438661 DISP3Q9P2K9 1392 aa23.15■■□□□ 1.3
KCNC4-204ENST00000438661 TBC1D2Q9BYX2 928 aa23.15■■□□□ 1.3
KCNC4-204ENST00000438661 SPINK5Q9NQ38 1064 aaPredicted RBP23.15■■□□□ 1.3
KCNC4-204ENST00000438661 COG6Q9Y2V7 657 aa23.14■■□□□ 1.3
KCNC4-204ENST00000438661 CCDC141Q6ZP82 1450 aa23.14■■□□□ 1.3
KCNC4-204ENST00000438661 TESK2Q96S53 571 aa23.14■■□□□ 1.29
KCNC4-204ENST00000438661 TRPM1Q7Z4N2 1603 aa23.14■■□□□ 1.29
KCNC4-204ENST00000438661 ARHGEF5Q12774 1597 aa23.13■■□□□ 1.29
KCNC4-204ENST00000438661 PLA2R1Q13018 1463 aa23.12■■□□□ 1.29
KCNC4-204ENST00000438661 SAMD9LQ8IVG5 1584 aa23.12■■□□□ 1.29
KCNC4-204ENST00000438661 MCM4P33991 863 aa23.12■■□□□ 1.29
KCNC4-204ENST00000438661 PANK1Q8TE04 598 aa23.12■■□□□ 1.29
KCNC4-204ENST00000438661 ZMYM4Q5VZL5 1548 aa23.12■■□□□ 1.29
KCNC4-204ENST00000438661 MYH16Q9H6N6 1097 aa23.1■■□□□ 1.29
KCNC4-204ENST00000438661 A2MP01023 1474 aa23.1■■□□□ 1.29
KCNC4-204ENST00000438661 TRAK2O60296 914 aa23.1■■□□□ 1.29
KCNC4-204ENST00000438661 SLFN5Q08AF3 891 aa23.1■■□□□ 1.29
KCNC4-204ENST00000438661 FSD2A1L4K1 749 aa23.09■■□□□ 1.29
KCNC4-204ENST00000438661 RSPH4AQ5TD94 716 aa23.08■■□□□ 1.29
KCNC4-204ENST00000438661 CDC42BPBQ9Y5S2 1711 aa23.08■■□□□ 1.29
KCNC4-204ENST00000438661 APAF1O14727 1248 aa23.08■■□□□ 1.29
KCNC4-204ENST00000438661 ESPNB1AK53 854 aa23.07■■□□□ 1.28
KCNC4-204ENST00000438661 GPRASP1Q5JY77 1395 aa23.07■■□□□ 1.28
KCNC4-204ENST00000438661 COL17A1Q9UMD9 1497 aaPredicted RBP23.06■■□□□ 1.28
KCNC4-204ENST00000438661 ERBB4Q15303 1308 aa23.06■■□□□ 1.28
KCNC4-204ENST00000438661 TRIM44Q96DX7 344 aaPredicted RBP23.06■■□□□ 1.28
KCNC4-204ENST00000438661 PPP2R1AP30153 589 aa23.05■■□□□ 1.28
KCNC4-204ENST00000438661 KNSTRNQ9Y448 316 aa23.05■■□□□ 1.28
KCNC4-204ENST00000438661 MAPK8IP3Q9UPT6 1336 aa23.05■■□□□ 1.28
KCNC4-204ENST00000438661 TMF1P82094 1093 aa23.05■■□□□ 1.28
KCNC4-204ENST00000438661 SYCP2Q9BX26 1530 aa23.05■■□□□ 1.28
KCNC4-204ENST00000438661 ERBINQ96RT1 1412 aa23.05■■□□□ 1.28
KCNC4-204ENST00000438661 CLUAP1Q96AJ1 413 aa23.04■■□□□ 1.28
KCNC4-204ENST00000438661 MRE11P49959 708 aa23.04■■□□□ 1.28
KCNC4-204ENST00000438661 PLEKHH2Q8IVE3 1493 aa23.04■■□□□ 1.28
KCNC4-204ENST00000438661 GRPEL1Q9HAV7 217 aa23.03■■□□□ 1.28
KCNC4-204ENST00000438661 TBC1D32Q96NH3 1257 aa23.02■■□□□ 1.28
KCNC4-204ENST00000438661 DMRT2Q9Y5R5 561 aa23.01■■□□□ 1.27
KCNC4-204ENST00000438661 PREX2Q70Z35 1606 aa23.01■■□□□ 1.27
KCNC4-204ENST00000438661 ZNF521Q96K83 1311 aa23.01■■□□□ 1.27
KCNC4-204ENST00000438661 EIF3AQ14152 1382 aaKnown RBP23.01■■□□□ 1.27
KCNC4-204ENST00000438661 PRDM15P57071 1507 aaPredicted RBP23■■□□□ 1.27
KCNC4-204ENST00000438661 ARHGAP5Q13017 1502 aa23■■□□□ 1.27
KCNC4-204ENST00000438661 MFAP1P55081 439 aaKnown RBP22.98■■□□□ 1.27
KCNC4-204ENST00000438661 NEUROD2Q15784 382 aa22.98■■□□□ 1.27
KCNC4-204ENST00000438661 CGNL1Q0VF96 1302 aa22.97■■□□□ 1.27
KCNC4-204ENST00000438661 BCL2L13Q9BXK5 485 aa22.96■■□□□ 1.27
KCNC4-204ENST00000438661 CHMP5Q9NZZ3 219 aa22.96■■□□□ 1.27
KCNC4-204ENST00000438661 PDZRN3Q9UPQ7 1066 aa22.95■■□□□ 1.27
KCNC4-204ENST00000438661 UNC13BO14795 1591 aa22.95■■□□□ 1.26
KCNC4-204ENST00000438661 TTC37Q6PGP7 1564 aa22.94■■□□□ 1.26
KCNC4-204ENST00000438661 MYO5CQ9NQX4 1742 aa22.94■■□□□ 1.26
KCNC4-204ENST00000438661 TNNQ9UQP3 1299 aa22.94■■□□□ 1.26
KCNC4-204ENST00000438661 CENPJQ9HC77 1338 aaPredicted RBP22.93■■□□□ 1.26
KCNC4-204ENST00000438661 PCDHB15Q9Y5E8 787 aa22.93■■□□□ 1.26
KCNC4-204ENST00000438661 NLRP1Q9C000 1473 aa22.93■■□□□ 1.26
KCNC4-204ENST00000438661 INSRP06213 1382 aa22.92■■□□□ 1.26
KCNC4-204ENST00000438661 NKTRP30414 1462 aaKnown RBP22.92■■□□□ 1.26
KCNC4-204ENST00000438661 RBM10P98175 930 aaKnown RBP22.92■■□□□ 1.26
KCNC4-204ENST00000438661 E9PSI1 815 aa22.91■■□□□ 1.26
KCNC4-204ENST00000438661 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.91■■□□□ 1.26
KCNC4-204ENST00000438661 ARID3AQ99856 593 aa22.91■■□□□ 1.26
KCNC4-204ENST00000438661 MAGI2Q86UL8 1455 aa22.91■■□□□ 1.26
KCNC4-204ENST00000438661 LAMC1P11047 1609 aa22.9■■□□□ 1.26
KCNC4-204ENST00000438661 KIAA1211Q6ZU35 1233 aa22.9■■□□□ 1.26
KCNC4-204ENST00000438661 C22orf23Q9BZE7 217 aa22.9■■□□□ 1.26
KCNC4-204ENST00000438661 GAS2L3Q86XJ1 694 aa22.9■■□□□ 1.26
KCNC4-204ENST00000438661 PDE3AQ14432 1141 aa22.89■■□□□ 1.26
KCNC4-204ENST00000438661 TRMT2AQ8IZ69 625 aaKnown RBP22.89■■□□□ 1.26
KCNC4-204ENST00000438661 IQGAP3Q86VI3 1631 aa22.89■■□□□ 1.26
KCNC4-204ENST00000438661 PODXL2Q9NZ53 605 aa22.88■■□□□ 1.25
KCNC4-204ENST00000438661 MAST1Q9Y2H9 1570 aa22.88■■□□□ 1.25
KCNC4-204ENST00000438661 EIF2AK4Q9P2K8 1649 aaKnown RBP22.87■■□□□ 1.25
KCNC4-204ENST00000438661 FOXD4L1Q9NU39 408 aa22.87■■□□□ 1.25
KCNC4-204ENST00000438661 WDR7Q9Y4E6 1490 aa22.86■■□□□ 1.25
KCNC4-204ENST00000438661 RRP7AQ9Y3A4 280 aaKnown RBP22.86■■□□□ 1.25
KCNC4-204ENST00000438661 RLBP1P12271 317 aa22.86■■□□□ 1.25
KCNC4-204ENST00000438661 AMER1Q5JTC6 1135 aaPredicted RBP22.86■■□□□ 1.25
KCNC4-204ENST00000438661 PMFBP1Q8TBY8 1022 aa22.86■■□□□ 1.25
KCNC4-204ENST00000438661 HSCBQ8IWL3 235 aa22.86■■□□□ 1.25
KCNC4-204ENST00000438661 PDCL3Q9H2J4 239 aa22.86■■□□□ 1.25
KCNC4-204ENST00000438661 DDX11L8A8MPP1 907 aa22.85■■□□□ 1.25
KCNC4-204ENST00000438661 PLEKHG5O94827 1062 aa22.84■■□□□ 1.25
KCNC4-204ENST00000438661 DUOX2Q9NRD8 1548 aa22.83■■□□□ 1.25
KCNC4-204ENST00000438661 ATP10AO60312 1499 aa22.83■■□□□ 1.25
KCNC4-204ENST00000438661 TPM2P07951 284 aa22.83■■□□□ 1.25
KCNC4-204ENST00000438661 PLXNC1O60486 1568 aa22.82■■□□□ 1.24
KCNC4-204ENST00000438661 FAM13BQ9NYF5 915 aa22.81■■□□□ 1.24
KCNC4-204ENST00000438661 RWDD1Q9H446 243 aaPredicted RBP22.8■■□□□ 1.24
KCNC4-204ENST00000438661 TNPO1Q92973 898 aaKnown RBP22.79■■□□□ 1.24
KCNC4-204ENST00000438661 VIRMAQ69YN4 1812 aaKnown RBP22.79■■□□□ 1.24
KCNC4-204ENST00000438661 EFCAB2Q5VUJ9 269 aa22.77■■□□□ 1.24
KCNC4-204ENST00000438661 RNF17Q9BXT8 1623 aaKnown RBP22.77■■□□□ 1.24
KCNC4-204ENST00000438661 TNNT2P45379 298 aaPredicted RBP22.77■■□□□ 1.23
KCNC4-204ENST00000438661 WWC1Q8IX03 1113 aa22.77■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms