RNA–Protein interactions for RNA: ENST00000436976.1

HMGN1P19-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 19, humanhuman

BASIC

Gene HMGN1P19, Length 333 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P19-201ENST00000436976 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.25■■□□□ 1.79
HMGN1P19-201ENST00000436976 RXRBP28702 533 aa26.25■■□□□ 1.79
HMGN1P19-201ENST00000436976 ERBINQ96RT1 1412 aa26.24■■□□□ 1.79
HMGN1P19-201ENST00000436976 DIP2AQ14689 1571 aa26.24■■□□□ 1.79
HMGN1P19-201ENST00000436976 KIF15Q9NS87 1388 aa26.22■■□□□ 1.79
HMGN1P19-201ENST00000436976 LMTK2Q8IWU2 1503 aa26.21■■□□□ 1.79
HMGN1P19-201ENST00000436976 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.21■■□□□ 1.79
HMGN1P19-201ENST00000436976 NOS1P29475 1434 aa26.19■■□□□ 1.78
HMGN1P19-201ENST00000436976 MYOM3Q5VTT5 1437 aa26.17■■□□□ 1.78
HMGN1P19-201ENST00000436976 GCC2Q8IWJ2 1684 aa26.16■■□□□ 1.78
HMGN1P19-201ENST00000436976 ZFYVE9O95405 1425 aa26.16■■□□□ 1.78
HMGN1P19-201ENST00000436976 BCANQ96GW7 911 aa26.15■■□□□ 1.78
HMGN1P19-201ENST00000436976 RGS12O14924 1447 aa26.14■■□□□ 1.78
HMGN1P19-201ENST00000436976 NCOA3Q9Y6Q9 1424 aa26.14■■□□□ 1.78
HMGN1P19-201ENST00000436976 RRP7BPQ9NSQ0 103 aa26.14■■□□□ 1.78
HMGN1P19-201ENST00000436976 PLEKHG1Q9ULL1 1385 aa26.13■■□□□ 1.77
HMGN1P19-201ENST00000436976 AFF2P51816 1311 aa26.13■■□□□ 1.77
HMGN1P19-201ENST00000436976 KANK1Q14678 1352 aa26.12■■□□□ 1.77
HMGN1P19-201ENST00000436976 ABCC5O15440 1437 aa26.12■■□□□ 1.77
HMGN1P19-201ENST00000436976 NUTM2BA6NNL0 878 aaPredicted RBP26.11■■□□□ 1.77
HMGN1P19-201ENST00000436976 NUTM2EB1AL46 878 aaPredicted RBP26.11■■□□□ 1.77
HMGN1P19-201ENST00000436976 NUTM2AQ8IVF1 878 aaPredicted RBP26.11■■□□□ 1.77
HMGN1P19-201ENST00000436976 TMEM131LA2VDJ0 1609 aa26.08■■□□□ 1.77
HMGN1P19-201ENST00000436976 NHSL1Q5SYE7 1610 aa26.08■■□□□ 1.77
HMGN1P19-201ENST00000436976 EP400Q96L91 3159 aa26.07■■□□□ 1.76
HMGN1P19-201ENST00000436976 C14orf37Q86TY3 774 aa26.06■■□□□ 1.76
HMGN1P19-201ENST00000436976 CADPS2Q86UW7 1296 aa26.06■■□□□ 1.76
HMGN1P19-201ENST00000436976 RIMS2Q9UQ26 1411 aa26.05■■□□□ 1.76
HMGN1P19-201ENST00000436976 BRINP3Q76B58 766 aa26.05■■□□□ 1.76
HMGN1P19-201ENST00000436976 SLC52A1Q9NWF4 448 aa26.05■■□□□ 1.76
HMGN1P19-201ENST00000436976 KANK4Q5T7N3 995 aaPredicted RBP26.04■■□□□ 1.76
HMGN1P19-201ENST00000436976 C19orf44Q9H6X5 657 aa26.04■■□□□ 1.76
HMGN1P19-201ENST00000436976 ADAMTS13Q76LX8 1427 aa26.04■■□□□ 1.76
HMGN1P19-201ENST00000436976 PTPN23Q9H3S7 1636 aa26.03■■□□□ 1.76
HMGN1P19-201ENST00000436976 TBX22Q9Y458 520 aa26.03■■□□□ 1.76
HMGN1P19-201ENST00000436976 ATF3P18847 181 aa26.02■■□□□ 1.76
HMGN1P19-201ENST00000436976 ASXL1Q8IXJ9 1541 aa26.02■■□□□ 1.76
HMGN1P19-201ENST00000436976 SETD5Q9C0A6 1442 aa26.01■■□□□ 1.75
HMGN1P19-201ENST00000436976 DAPK1P53355 1430 aa26■■□□□ 1.75
HMGN1P19-201ENST00000436976 RBM6P78332 1123 aaKnown RBP26■■□□□ 1.75
HMGN1P19-201ENST00000436976 SETBP1Q9Y6X0 1596 aa25.99■■□□□ 1.75
HMGN1P19-201ENST00000436976 PPP1R15AO75807 674 aaPredicted RBP25.99■■□□□ 1.75
HMGN1P19-201ENST00000436976 QTRT2Q9H974 415 aaKnown RBP25.99■■□□□ 1.75
HMGN1P19-201ENST00000436976 NUTM2DQ5VT03 806 aaPredicted RBP25.98■■□□□ 1.75
HMGN1P19-201ENST00000436976 RPRD2Q5VT52 1461 aaKnown RBP25.96■■□□□ 1.75
HMGN1P19-201ENST00000436976 C8orf37Q96NL8 207 aa25.95■■□□□ 1.74
HMGN1P19-201ENST00000436976 VPS8Q8N3P4 1428 aa25.94■■□□□ 1.74
HMGN1P19-201ENST00000436976 PTPRUQ92729 1446 aa25.94■■□□□ 1.74
HMGN1P19-201ENST00000436976 PIK3R4Q99570 1358 aa25.94■■□□□ 1.74
HMGN1P19-201ENST00000436976 DCCP43146 1447 aa25.92■■□□□ 1.74
HMGN1P19-201ENST00000436976 MST1RQ04912 1400 aa25.92■■□□□ 1.74
HMGN1P19-201ENST00000436976 XRN1Q8IZH2 1706 aaKnown RBP25.91■■□□□ 1.74
HMGN1P19-201ENST00000436976 TRPM2O94759 1503 aa25.91■■□□□ 1.74
HMGN1P19-201ENST00000436976 ATAD2Q6PL18 1390 aa25.91■■□□□ 1.74
HMGN1P19-201ENST00000436976 PNPLA6Q8IY17 1366 aa25.91■■□□□ 1.74
HMGN1P19-201ENST00000436976 HDGFP51858 240 aaKnown RBP25.9■■□□□ 1.74
HMGN1P19-201ENST00000436976 ANKRD30AQ9BXX3 1397 aa25.9■■□□□ 1.74
HMGN1P19-201ENST00000436976 CHIC2Q9UKJ5 165 aa25.89■■□□□ 1.74
HMGN1P19-201ENST00000436976 UNC13BO14795 1591 aa25.89■■□□□ 1.73
HMGN1P19-201ENST00000436976 DDX17Q92841 729 aaKnown RBP25.87■■□□□ 1.73
HMGN1P19-201ENST00000436976 LRRC59Q96AG4 307 aaKnown RBP25.87■■□□□ 1.73
HMGN1P19-201ENST00000436976 ZRANB1Q9UGI0 708 aa25.87■■□□□ 1.73
HMGN1P19-201ENST00000436976 AMOTL2Q9Y2J4 779 aa25.87■■□□□ 1.73
HMGN1P19-201ENST00000436976 NRXN3Q9Y4C0 1643 aa25.86■■□□□ 1.73
HMGN1P19-201ENST00000436976 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.85■■□□□ 1.73
HMGN1P19-201ENST00000436976 E9PCH4 1651 aa25.84■■□□□ 1.73
HMGN1P19-201ENST00000436976 NGLY1Q96IV0 654 aa25.83■■□□□ 1.73
HMGN1P19-201ENST00000436976 NALCNQ8IZF0 1738 aa25.83■■□□□ 1.72
HMGN1P19-201ENST00000436976 CHGAP10645 457 aaKnown RBP25.81■■□□□ 1.72
HMGN1P19-201ENST00000436976 LAMC1P11047 1609 aa25.81■■□□□ 1.72
HMGN1P19-201ENST00000436976 ADGRL2O95490 1459 aa25.8■■□□□ 1.72
HMGN1P19-201ENST00000436976 ADAMTS2O95450 1211 aa25.8■■□□□ 1.72
HMGN1P19-201ENST00000436976 ATRNO75882 1429 aa25.74■■□□□ 1.71
HMGN1P19-201ENST00000436976 FOXD1Q16676 465 aa25.74■■□□□ 1.71
HMGN1P19-201ENST00000436976 USP21Q9UK80 565 aa25.74■■□□□ 1.71
HMGN1P19-201ENST00000436976 ANKRD50Q9ULJ7 1429 aa25.73■■□□□ 1.71
HMGN1P19-201ENST00000436976 TRPC5Q9UL62 973 aaPredicted RBP25.73■■□□□ 1.71
HMGN1P19-201ENST00000436976 ADGRL3Q9HAR2 1447 aa25.72■■□□□ 1.71
HMGN1P19-201ENST00000436976 MARF1Q9Y4F3 1742 aaKnown RBP25.72■■□□□ 1.71
HMGN1P19-201ENST00000436976 COL22A1Q8NFW1 1626 aaPredicted RBP25.7■■□□□ 1.71
HMGN1P19-201ENST00000436976 FNBP4Q8N3X1 1017 aaPredicted RBP25.69■■□□□ 1.7
HMGN1P19-201ENST00000436976 IQGAP3Q86VI3 1631 aa25.69■■□□□ 1.7
HMGN1P19-201ENST00000436976 LRP5O75197 1615 aa25.68■■□□□ 1.7
HMGN1P19-201ENST00000436976 PTCH1Q13635 1447 aa25.68■■□□□ 1.7
HMGN1P19-201ENST00000436976 METP08581 1390 aa25.68■■□□□ 1.7
HMGN1P19-201ENST00000436976 C1orf167Q5SNV9 1468 aa25.66■■□□□ 1.7
HMGN1P19-201ENST00000436976 BRWD3Q6RI45 1802 aa25.66■■□□□ 1.7
HMGN1P19-201ENST00000436976 CCDC125Q86Z20 511 aa25.66■■□□□ 1.7
HMGN1P19-201ENST00000436976 SOS2Q07890 1332 aaPredicted RBP25.64■■□□□ 1.7
HMGN1P19-201ENST00000436976 BCL9LQ86UU0 1499 aa25.62■■□□□ 1.69
HMGN1P19-201ENST00000436976 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.6■■□□□ 1.69
HMGN1P19-201ENST00000436976 MYOM2P54296 1465 aa25.59■■□□□ 1.69
HMGN1P19-201ENST00000436976 ORAI2Q96SN7 254 aa25.58■■□□□ 1.69
HMGN1P19-201ENST00000436976 SPHKAPQ2M3C7 1700 aa25.57■■□□□ 1.68
HMGN1P19-201ENST00000436976 GLI3P10071 1580 aa25.56■■□□□ 1.68
HMGN1P19-201ENST00000436976 BLMP54132 1417 aaPredicted RBP25.55■■□□□ 1.68
HMGN1P19-201ENST00000436976 DEFB132Q7Z7B7 95 aa25.53■■□□□ 1.68
HMGN1P19-201ENST00000436976 GJD4Q96KN9 370 aaPredicted RBP25.52■■□□□ 1.68
HMGN1P19-201ENST00000436976 NEXMIFQ5QGS0 1516 aa25.51■■□□□ 1.67
HMGN1P19-201ENST00000436976 LOC105371045A0A1W2PR82 267 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms