RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 PNMA3Q9UL41 463 aa6.24□□□□□ -1.41
HMGB1P27-201ENST00000431429 SOCS7O14512 581 aa6.23□□□□□ -1.41
HMGB1P27-201ENST00000431429 RSBN1LQ6PCB5 846 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P27-201ENST00000431429 FNBP4Q8N3X1 1017 aaPredicted RBP6.23□□□□□ -1.41
HMGB1P27-201ENST00000431429 BANK1Q8NDB2 785 aa6.23□□□□□ -1.41
HMGB1P27-201ENST00000431429 KCNK17Q96T54 332 aa6.23□□□□□ -1.41
HMGB1P27-201ENST00000431429 SPDYE5A6NIY4 337 aa6.22□□□□□ -1.41
HMGB1P27-201ENST00000431429 RFC5P40937 340 aa6.22□□□□□ -1.41
HMGB1P27-201ENST00000431429 HOMEZQ8IX15 550 aa6.22□□□□□ -1.41
HMGB1P27-201ENST00000431429 SMAPO00193 183 aa6.21□□□□□ -1.42
HMGB1P27-201ENST00000431429 RIC3Q7Z5B4 369 aa6.21□□□□□ -1.42
HMGB1P27-201ENST00000431429 CLUAP1Q96AJ1 413 aa6.21□□□□□ -1.42
HMGB1P27-201ENST00000431429 RABGEF1Q9UJ41 708 aa6.21□□□□□ -1.42
HMGB1P27-201ENST00000431429 MOXD2PA6NHM9 499 aa6.2□□□□□ -1.42
HMGB1P27-201ENST00000431429 ARHGAP33O14559 1287 aa6.2□□□□□ -1.42
HMGB1P27-201ENST00000431429 TRAK2O60296 914 aa6.2□□□□□ -1.42
HMGB1P27-201ENST00000431429 LILRB3O75022 631 aa6.2□□□□□ -1.42
HMGB1P27-201ENST00000431429 PSEN2P49810 448 aa6.2□□□□□ -1.42
HMGB1P27-201ENST00000431429 KIAA1468Q9P260 1216 aa6.2□□□□□ -1.42
HMGB1P27-201ENST00000431429 DDX11L8A8MPP1 907 aa6.19□□□□□ -1.42
HMGB1P27-201ENST00000431429 SLC10A3P09131 477 aa6.19□□□□□ -1.42
HMGB1P27-201ENST00000431429 GCGRP47871 477 aa6.19□□□□□ -1.42
HMGB1P27-201ENST00000431429 BHMG1C9JSJ3 638 aaPredicted RBP6.18□□□□□ -1.42
HMGB1P27-201ENST00000431429 UBTFP17480 764 aaKnown RBP6.18□□□□□ -1.42
HMGB1P27-201ENST00000431429 PBX2P40425 430 aa6.18□□□□□ -1.42
HMGB1P27-201ENST00000431429 TMEM259Q4ZIN3 620 aa6.18□□□□□ -1.42
HMGB1P27-201ENST00000431429 DMRTA1Q5VZB9 504 aa6.18□□□□□ -1.42
HMGB1P27-201ENST00000431429 POM121Q96HA1 1249 aa6.18□□□□□ -1.42
HMGB1P27-201ENST00000431429 SNRKQ9NRH2 765 aa6.18□□□□□ -1.42
HMGB1P27-201ENST00000431429 HOXA2O43364 376 aa6.17□□□□□ -1.42
HMGB1P27-201ENST00000431429 ST18O60284 1047 aa6.17□□□□□ -1.42
HMGB1P27-201ENST00000431429 NDUFV2P19404 249 aa6.17□□□□□ -1.42
HMGB1P27-201ENST00000431429 USP46P62068 366 aa6.17□□□□□ -1.42
HMGB1P27-201ENST00000431429 QPCTQ16769 361 aa6.17□□□□□ -1.42
HMGB1P27-201ENST00000431429 VARS2Q5ST30 1063 aaKnown RBP6.17□□□□□ -1.42
HMGB1P27-201ENST00000431429 PRPF38BQ5VTL8 546 aaKnown RBP6.17□□□□□ -1.42
HMGB1P27-201ENST00000431429 ZNF687Q8N1G0 1237 aa6.17□□□□□ -1.42
HMGB1P27-201ENST00000431429 MTMR14Q8NCE2 650 aa6.17□□□□□ -1.42
HMGB1P27-201ENST00000431429 VPS9D1Q9Y2B5 631 aa6.17□□□□□ -1.42
HMGB1P27-201ENST00000431429 COG6Q9Y2V7 657 aa6.17□□□□□ -1.42
HMGB1P27-201ENST00000431429 PCDHB15Q9Y5E8 787 aa6.17□□□□□ -1.42
HMGB1P27-201ENST00000431429 KDM4AO75164 1064 aa6.16□□□□□ -1.42
HMGB1P27-201ENST00000431429 SWT1Q5T5J6 900 aaKnown RBP6.16□□□□□ -1.42
HMGB1P27-201ENST00000431429 LHX8Q68G74 356 aa6.16□□□□□ -1.42
HMGB1P27-201ENST00000431429 PROSER2Q86WR7 435 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P27-201ENST00000431429 NUTM1Q86Y26 1132 aa6.16□□□□□ -1.42
HMGB1P27-201ENST00000431429 KCNH8Q96L42 1107 aa6.16□□□□□ -1.42
HMGB1P27-201ENST00000431429 FAM98CQ17RN3 349 aaKnown RBP6.15□□□□□ -1.42
HMGB1P27-201ENST00000431429 RTL5Q5HYW3 569 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P27-201ENST00000431429 LAPTM4BQ86VI4 370 aa6.15□□□□□ -1.42
HMGB1P27-201ENST00000431429 PCDHGC3Q9UN70 934 aa6.15□□□□□ -1.42
HMGB1P27-201ENST00000431429 ERBB3P21860 1342 aa6.15□□□□□ -1.43
HMGB1P27-201ENST00000431429 POTEB3A0JP26 581 aa6.14□□□□□ -1.43
HMGB1P27-201ENST00000431429 ARID3CA6NKF2 412 aa6.14□□□□□ -1.43
HMGB1P27-201ENST00000431429 TK2O00142 265 aa6.14□□□□□ -1.43
HMGB1P27-201ENST00000431429 POTEBQ6S5H4 581 aa6.14□□□□□ -1.43
HMGB1P27-201ENST00000431429 SEPT9Q9UHD8 586 aaPredicted RBP6.14□□□□□ -1.43
HMGB1P27-201ENST00000431429 AXIN2Q9Y2T1 843 aa6.14□□□□□ -1.43
HMGB1P27-201ENST00000431429 APBB1O00213 710 aa6.13□□□□□ -1.43
HMGB1P27-201ENST00000431429 HRCP23327 699 aa6.13□□□□□ -1.43
HMGB1P27-201ENST00000431429 RDH13Q8NBN7 331 aa6.13□□□□□ -1.43
HMGB1P27-201ENST00000431429 GPR37L1O60883 481 aa6.12□□□□□ -1.43
HMGB1P27-201ENST00000431429 FDX1P10109 184 aa6.12□□□□□ -1.43
HMGB1P27-201ENST00000431429 LCE2DQ5TA82 110 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P27-201ENST00000431429 CABLES1Q8TDN4 633 aa6.12□□□□□ -1.43
HMGB1P27-201ENST00000431429 HLA-CQ95604 372 aa6.12□□□□□ -1.43
HMGB1P27-201ENST00000431429 GJD4Q96KN9 370 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P27-201ENST00000431429 HRO43593 1189 aa6.11□□□□□ -1.43
HMGB1P27-201ENST00000431429 EMP3P54852 163 aa6.11□□□□□ -1.43
HMGB1P27-201ENST00000431429 RSPH4AQ5TD94 716 aa6.11□□□□□ -1.43
HMGB1P27-201ENST00000431429 ZBTB3Q9H5J0 574 aa6.11□□□□□ -1.43
HMGB1P27-201ENST00000431429 USP17L8P0C7I0 530 aa6.1□□□□□ -1.43
HMGB1P27-201ENST00000431429 GUCA2AQ02747 115 aa6.1□□□□□ -1.43
HMGB1P27-201ENST00000431429 SAMD7Q7Z3H4 446 aa6.1□□□□□ -1.43
HMGB1P27-201ENST00000431429 SLF2Q8IX21 1173 aa6.1□□□□□ -1.43
HMGB1P27-201ENST00000431429 CCDC82Q8N4S0 544 aa6.1□□□□□ -1.43
HMGB1P27-201ENST00000431429 MARVELD3Q96A59 401 aa6.1□□□□□ -1.43
HMGB1P27-201ENST00000431429 PLSCR2Q9NRY7 297 aa6.1□□□□□ -1.43
HMGB1P27-201ENST00000431429 RAD21O60216 631 aa6.09□□□□□ -1.43
HMGB1P27-201ENST00000431429 CSPP1Q1MSJ5 1256 aa6.09□□□□□ -1.43
HMGB1P27-201ENST00000431429 HS3ST6Q96QI5 342 aa6.09□□□□□ -1.43
HMGB1P27-201ENST00000431429 NBPF3Q9H094 633 aa6.09□□□□□ -1.43
HMGB1P27-201ENST00000431429 FAM205CA6NFA0 338 aa6.08□□□□□ -1.44
HMGB1P27-201ENST00000431429 FUT2Q10981 343 aa6.08□□□□□ -1.44
HMGB1P27-201ENST00000431429 ZFRQ96KR1 1074 aaKnown RBP6.08□□□□□ -1.44
HMGB1P27-201ENST00000431429 TRIM34Q9BYJ4 488 aa6.08□□□□□ -1.44
HMGB1P27-201ENST00000431429 CFAP99D6REC4 459 aa6.07□□□□□ -1.44
HMGB1P27-201ENST00000431429 AP1G2O75843 785 aa6.07□□□□□ -1.44
HMGB1P27-201ENST00000431429 CFHP08603 1231 aa6.07□□□□□ -1.44
HMGB1P27-201ENST00000431429 MTMR2Q13614 643 aa6.07□□□□□ -1.44
HMGB1P27-201ENST00000431429 GDPD2Q9HCC8 539 aa6.07□□□□□ -1.44
HMGB1P27-201ENST00000431429 HMX1Q9NP08 348 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P27-201ENST00000431429 ZNF777Q9ULD5 760 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P27-201ENST00000431429 TBC1D2BQ9UPU7 963 aa6.07□□□□□ -1.44
HMGB1P27-201ENST00000431429 ACTN4O43707 911 aaKnown RBP6.06□□□□□ -1.44
HMGB1P27-201ENST00000431429 ATP6V1AP38606 617 aa6.06□□□□□ -1.44
HMGB1P27-201ENST00000431429 LSM11P83369 360 aaKnown RBP eCLIP6.06□□□□□ -1.44
HMGB1P27-201ENST00000431429 IRF5Q13568 498 aa6.06□□□□□ -1.44
HMGB1P27-201ENST00000431429 MORN1Q5T089 497 aa6.06□□□□□ -1.44
HMGB1P27-201ENST00000431429 ADGRD1Q6QNK2 874 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms