RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 TOM1O60784 492 aa26.46■■□□□ 1.83
NUP50-208ENST00000430547 ZFYVE9O95405 1425 aa26.46■■□□□ 1.83
NUP50-208ENST00000430547 SCAF1Q9H7N4 1312 aaKnown RBP26.44■■□□□ 1.82
NUP50-208ENST00000430547 TRIM52Q96A61 297 aa26.44■■□□□ 1.82
NUP50-208ENST00000430547 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.42■■□□□ 1.82
NUP50-208ENST00000430547 SLC26A8Q96RN1 970 aa26.42■■□□□ 1.82
NUP50-208ENST00000430547 PLEKHG1Q9ULL1 1385 aa26.41■■□□□ 1.82
NUP50-208ENST00000430547 PIP4K2BP78356 416 aa26.39■■□□□ 1.82
NUP50-208ENST00000430547 SENP3Q9H4L4 574 aaPredicted RBP26.39■■□□□ 1.82
NUP50-208ENST00000430547 XIRP1Q702N8 1843 aaKnown RBP26.39■■□□□ 1.81
NUP50-208ENST00000430547 KIF1BO60333 1816 aa26.38■■□□□ 1.81
NUP50-208ENST00000430547 TRPM2O94759 1503 aa26.38■■□□□ 1.81
NUP50-208ENST00000430547 CLTCL1P53675 1640 aa26.36■■□□□ 1.81
NUP50-208ENST00000430547 KCNA6P17658 529 aa26.35■■□□□ 1.81
NUP50-208ENST00000430547 NWD1Q149M9 1564 aa26.34■■□□□ 1.81
NUP50-208ENST00000430547 CHD2O14647 1828 aaKnown RBP26.33■■□□□ 1.81
NUP50-208ENST00000430547 NUTM2DQ5VT03 806 aaPredicted RBP26.33■■□□□ 1.81
NUP50-208ENST00000430547 SLC4A1APQ9BWU0 796 aaKnown RBP26.33■■□□□ 1.81
NUP50-208ENST00000430547 NKTRP30414 1462 aaKnown RBP26.32■■□□□ 1.8
NUP50-208ENST00000430547 ZNF326Q5BKZ1 582 aaKnown RBP26.32■■□□□ 1.8
NUP50-208ENST00000430547 DIP2AQ14689 1571 aa26.32■■□□□ 1.8
NUP50-208ENST00000430547 ALKQ9UM73 1620 aa26.3■■□□□ 1.8
NUP50-208ENST00000430547 PROSER2Q86WR7 435 aaPredicted RBP26.28■■□□□ 1.8
NUP50-208ENST00000430547 TMEM94Q12767 1356 aa26.28■■□□□ 1.8
NUP50-208ENST00000430547 TBX22Q9Y458 520 aa26.27■■□□□ 1.8
NUP50-208ENST00000430547 ADAMTS13Q76LX8 1427 aa26.24■■□□□ 1.79
NUP50-208ENST00000430547 HSPA1LP34931 641 aa26.23■■□□□ 1.79
NUP50-208ENST00000430547 NEXMIFQ5QGS0 1516 aa26.22■■□□□ 1.79
NUP50-208ENST00000430547 PIK3R4Q99570 1358 aa26.2■■□□□ 1.79
NUP50-208ENST00000430547 DISP3Q9P2K9 1392 aa26.2■■□□□ 1.79
NUP50-208ENST00000430547 SETBP1Q9Y6X0 1596 aa26.2■■□□□ 1.79
NUP50-208ENST00000430547 ACIN1Q9UKV3 1341 aaKnown RBP26.2■■□□□ 1.79
NUP50-208ENST00000430547 NRXN3Q9Y4C0 1643 aa26.2■■□□□ 1.78
NUP50-208ENST00000430547 RBM33Q96EV2 1170 aaKnown RBP26.19■■□□□ 1.78
NUP50-208ENST00000430547 SETD5Q9C0A6 1442 aa26.19■■□□□ 1.78
NUP50-208ENST00000430547 MSH6P52701 1360 aa26.18■■□□□ 1.78
NUP50-208ENST00000430547 FOXD1Q16676 465 aa26.16■■□□□ 1.78
NUP50-208ENST00000430547 MPHOSPH9Q99550 1183 aa26.15■■□□□ 1.78
NUP50-208ENST00000430547 CCDC144AA2RUR9 1427 aa26.14■■□□□ 1.77
NUP50-208ENST00000430547 PPLO60437 1756 aa26.13■■□□□ 1.77
NUP50-208ENST00000430547 C14orf37Q86TY3 774 aa26.13■■□□□ 1.77
NUP50-208ENST00000430547 ROBO1Q9Y6N7 1651 aa26.1■■□□□ 1.77
NUP50-208ENST00000430547 VGFO15240 615 aaPredicted RBP26.1■■□□□ 1.77
NUP50-208ENST00000430547 AMOTL2Q9Y2J4 779 aa26.1■■□□□ 1.77
NUP50-208ENST00000430547 NCOA3Q9Y6Q9 1424 aa26.1■■□□□ 1.77
NUP50-208ENST00000430547 XRN1Q8IZH2 1706 aaKnown RBP26.1■■□□□ 1.77
NUP50-208ENST00000430547 RPGRIP1LQ68CZ1 1315 aa26.09■■□□□ 1.77
NUP50-208ENST00000430547 RAB3GAP2Q9H2M9 1393 aa26.08■■□□□ 1.77
NUP50-208ENST00000430547 PTPRUQ92729 1446 aa26.08■■□□□ 1.77
NUP50-208ENST00000430547 FAM135BQ49AJ0 1406 aa26.07■■□□□ 1.76
NUP50-208ENST00000430547 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.06■■□□□ 1.76
NUP50-208ENST00000430547 METP08581 1390 aa26.05■■□□□ 1.76
NUP50-208ENST00000430547 MED1Q15648 1581 aaPredicted RBP26.03■■□□□ 1.76
NUP50-208ENST00000430547 SETD1AO15047 1707 aaKnown RBP26.02■■□□□ 1.76
NUP50-208ENST00000430547 SLAIN2Q9P270 581 aa26.01■■□□□ 1.75
NUP50-208ENST00000430547 IFT172Q9UG01 1749 aa26.01■■□□□ 1.75
NUP50-208ENST00000430547 ATF3P18847 181 aa26■■□□□ 1.75
NUP50-208ENST00000430547 C19orf44Q9H6X5 657 aa26■■□□□ 1.75
NUP50-208ENST00000430547 RGL3Q3MIN7 710 aa25.99■■□□□ 1.75
NUP50-208ENST00000430547 CADPS2Q86UW7 1296 aa25.99■■□□□ 1.75
NUP50-208ENST00000430547 SPATA31E1Q6ZUB1 1445 aa25.98■■□□□ 1.75
NUP50-208ENST00000430547 PHLPP1O60346 1717 aa25.97■■□□□ 1.75
NUP50-208ENST00000430547 ANKRD30BQ9BXX2 1392 aa25.95■■□□□ 1.75
NUP50-208ENST00000430547 DCCP43146 1447 aa25.95■■□□□ 1.74
NUP50-208ENST00000430547 NALCNQ8IZF0 1738 aa25.93■■□□□ 1.74
NUP50-208ENST00000430547 PTCH1Q13635 1447 aa25.9■■□□□ 1.74
NUP50-208ENST00000430547 PHF23Q9BUL5 403 aaPredicted RBP25.9■■□□□ 1.74
NUP50-208ENST00000430547 ADGRF5Q8IZF2 1346 aa25.89■■□□□ 1.74
NUP50-208ENST00000430547 ADGRL3Q9HAR2 1447 aa25.89■■□□□ 1.74
NUP50-208ENST00000430547 ILDR2Q71H61 639 aa25.89■■□□□ 1.74
NUP50-208ENST00000430547 HRCP23327 699 aa25.88■■□□□ 1.73
NUP50-208ENST00000430547 PRAG1Q86YV5 1406 aa25.85■■□□□ 1.73
NUP50-208ENST00000430547 COL16A1Q07092 1604 aaPredicted RBP25.84■■□□□ 1.73
NUP50-208ENST00000430547 ROBO2Q9HCK4 1378 aa25.83■■□□□ 1.73
NUP50-208ENST00000430547 PIK3C2GO75747 1445 aa25.83■■□□□ 1.73
NUP50-208ENST00000430547 AHDC1Q5TGY3 1603 aaPredicted RBP25.83■■□□□ 1.73
NUP50-208ENST00000430547 MST1RQ04912 1400 aa25.82■■□□□ 1.72
NUP50-208ENST00000430547 LAMC1P11047 1609 aa25.82■■□□□ 1.72
NUP50-208ENST00000430547 KNDC1Q76NI1 1749 aa25.8■■□□□ 1.72
NUP50-208ENST00000430547 MYOM2P54296 1465 aa25.8■■□□□ 1.72
NUP50-208ENST00000430547 ASXL1Q8IXJ9 1541 aa25.79■■□□□ 1.72
NUP50-208ENST00000430547 BRINP3Q76B58 766 aa25.79■■□□□ 1.72
NUP50-208ENST00000430547 JCADQ9P266 1359 aa25.79■■□□□ 1.72
NUP50-208ENST00000430547 STK26Q9P289 416 aa25.76■■□□□ 1.71
NUP50-208ENST00000430547 NHSL1Q5SYE7 1610 aa25.76■■□□□ 1.71
NUP50-208ENST00000430547 NRXN1Q9ULB1 1477 aa25.75■■□□□ 1.71
NUP50-208ENST00000430547 LRPPRCP42704 1394 aaKnown RBP25.75■■□□□ 1.71
NUP50-208ENST00000430547 TECPR2O15040 1411 aa25.74■■□□□ 1.71
NUP50-208ENST00000430547 SHPRHQ149N8 1683 aa25.74■■□□□ 1.71
NUP50-208ENST00000430547 TMEM132EQ6IEE7 984 aa25.73■■□□□ 1.71
NUP50-208ENST00000430547 CDC42BPGQ6DT37 1551 aa25.72■■□□□ 1.71
NUP50-208ENST00000430547 C1orf167Q5SNV9 1468 aa25.72■■□□□ 1.71
NUP50-208ENST00000430547 YTHDC2Q9H6S0 1430 aaKnown RBP25.71■■□□□ 1.71
NUP50-208ENST00000430547 SOCS7O14512 581 aa25.71■■□□□ 1.71
NUP50-208ENST00000430547 ABCC11Q96J66 1382 aa25.7■■□□□ 1.71
NUP50-208ENST00000430547 C14orf93Q9H972 538 aaKnown RBP25.7■■□□□ 1.7
NUP50-208ENST00000430547 DHX57Q6P158 1386 aaKnown RBP25.69■■□□□ 1.7
NUP50-208ENST00000430547 CFAP70Q5T0N1 1121 aa25.68■■□□□ 1.7
NUP50-208ENST00000430547 SPATA31A6Q5VVP1 1343 aa25.67■■□□□ 1.7
NUP50-208ENST00000430547 WAPLQ7Z5K2 1190 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms