RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 TNRQ92752 1358 aa12.79□□□□□ -0.36
NR1I3-209ENST00000428574 USP47Q96K76 1375 aa12.79□□□□□ -0.36
NR1I3-209ENST00000428574 PIK3C2GO75747 1445 aa12.79□□□□□ -0.36
NR1I3-209ENST00000428574 IDI1Q13907 227 aa12.78□□□□□ -0.36
NR1I3-209ENST00000428574 VGFO15240 615 aaPredicted RBP12.77□□□□□ -0.37
NR1I3-209ENST00000428574 CARD11Q9BXL7 1154 aa12.77□□□□□ -0.37
NR1I3-209ENST00000428574 ADAMTSL3P82987 1691 aa12.77□□□□□ -0.37
NR1I3-209ENST00000428574 SLC24A1O60721 1099 aa12.76□□□□□ -0.37
NR1I3-209ENST00000428574 HSPA5P11021 654 aaKnown RBP12.76□□□□□ -0.37
NR1I3-209ENST00000428574 MLECQ14165 292 aa12.76□□□□□ -0.37
NR1I3-209ENST00000428574 KDM2AQ9Y2K7 1162 aa12.76□□□□□ -0.37
NR1I3-209ENST00000428574 A2ML1A8K2U0 1454 aa12.76□□□□□ -0.37
NR1I3-209ENST00000428574 POLR1AO95602 1720 aaPredicted RBP12.75□□□□□ -0.37
NR1I3-209ENST00000428574 C3P01024 1663 aa12.75□□□□□ -0.37
NR1I3-209ENST00000428574 DIEXFQ68CQ4 756 aaKnown RBP12.75□□□□□ -0.37
NR1I3-209ENST00000428574 SCAF11Q99590 1463 aaKnown RBP12.75□□□□□ -0.37
NR1I3-209ENST00000428574 IQGAP1P46940 1657 aa12.74□□□□□ -0.37
NR1I3-209ENST00000428574 EIF3AQ14152 1382 aaKnown RBP12.74□□□□□ -0.37
NR1I3-209ENST00000428574 ZNF326Q5BKZ1 582 aaKnown RBP12.74□□□□□ -0.37
NR1I3-209ENST00000428574 FBXO31Q5XUX0 539 aaPredicted RBP12.74□□□□□ -0.37
NR1I3-209ENST00000428574 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.73□□□□□ -0.37
NR1I3-209ENST00000428574 HDGFP51858 240 aaKnown RBP12.72□□□□□ -0.37
NR1I3-209ENST00000428574 SBNO2Q9Y2G9 1366 aa12.71□□□□□ -0.37
NR1I3-209ENST00000428574 ADGRF5Q8IZF2 1346 aa12.71□□□□□ -0.37
NR1I3-209ENST00000428574 C14orf93Q9H972 538 aaKnown RBP12.71□□□□□ -0.37
NR1I3-209ENST00000428574 ADGRB1O14514 1584 aa12.71□□□□□ -0.37
NR1I3-209ENST00000428574 UBR1Q8IWV7 1749 aa12.71□□□□□ -0.38
NR1I3-209ENST00000428574 CFAP65Q6ZU64 1925 aaKnown RBP12.7□□□□□ -0.38
NR1I3-209ENST00000428574 MYO3AQ8NEV4 1616 aa12.7□□□□□ -0.38
NR1I3-209ENST00000428574 CHGAP10645 457 aaKnown RBP12.7□□□□□ -0.38
NR1I3-209ENST00000428574 CCDC7Q96M83 1385 aa12.69□□□□□ -0.38
NR1I3-209ENST00000428574 SLIT1O75093 1534 aa12.69□□□□□ -0.38
NR1I3-209ENST00000428574 RIMS2Q9UQ26 1411 aa12.69□□□□□ -0.38
NR1I3-209ENST00000428574 ZNF142P52746 1687 aaPredicted RBP12.68□□□□□ -0.38
NR1I3-209ENST00000428574 ARHGAP23Q9P227 1491 aa12.68□□□□□ -0.38
NR1I3-209ENST00000428574 STAG3Q9UJ98 1225 aa12.68□□□□□ -0.38
NR1I3-209ENST00000428574 TMEM2Q9UHN6 1383 aa12.68□□□□□ -0.38
NR1I3-209ENST00000428574 RIMS1Q86UR5 1692 aaKnown RBP12.67□□□□□ -0.38
NR1I3-209ENST00000428574 MYO5BQ9ULV0 1848 aa12.67□□□□□ -0.38
NR1I3-209ENST00000428574 NBPF1Q3BBV0 1214 aa12.67□□□□□ -0.38
NR1I3-209ENST00000428574 WASHC2AQ641Q2 1341 aa12.66□□□□□ -0.38
NR1I3-209ENST00000428574 CEP170BQ9Y4F5 1589 aaPredicted RBP12.64□□□□□ -0.39
NR1I3-209ENST00000428574 ST20-MTHFSA0A0A6YYL1 179 aa12.64□□□□□ -0.39
NR1I3-209ENST00000428574 CDCA8Q53HL2 280 aa12.64□□□□□ -0.39
NR1I3-209ENST00000428574 CFAP70Q5T0N1 1121 aa12.64□□□□□ -0.39
NR1I3-209ENST00000428574 PLEKHG1Q9ULL1 1385 aa12.64□□□□□ -0.39
NR1I3-209ENST00000428574 DIP2AQ14689 1571 aa12.64□□□□□ -0.39
NR1I3-209ENST00000428574 KIF7Q2M1P5 1343 aa12.63□□□□□ -0.39
NR1I3-209ENST00000428574 DLC1Q96QB1 1528 aa12.63□□□□□ -0.39
NR1I3-209ENST00000428574 ALKQ9UM73 1620 aa12.63□□□□□ -0.39
NR1I3-209ENST00000428574 THEMISQ8N1K5 641 aaPredicted RBP12.63□□□□□ -0.39
NR1I3-209ENST00000428574 TESK2Q96S53 571 aa12.63□□□□□ -0.39
NR1I3-209ENST00000428574 ASXL1Q8IXJ9 1541 aa12.62□□□□□ -0.39
NR1I3-209ENST00000428574 PTPRMP28827 1452 aa12.61□□□□□ -0.39
NR1I3-209ENST00000428574 TMF1P82094 1093 aa12.61□□□□□ -0.39
NR1I3-209ENST00000428574 PUS7Q96PZ0 661 aaKnown RBP12.61□□□□□ -0.39
NR1I3-209ENST00000428574 SETD1AO15047 1707 aaKnown RBP12.61□□□□□ -0.39
NR1I3-209ENST00000428574 NRXN3Q9Y4C0 1643 aa12.61□□□□□ -0.39
NR1I3-209ENST00000428574 TECPR2O15040 1411 aa12.6□□□□□ -0.39
NR1I3-209ENST00000428574 SETD1BQ9UPS6 1966 aaKnown RBP12.6□□□□□ -0.39
NR1I3-209ENST00000428574 CEBPAP49715 358 aaPredicted RBP12.59□□□□□ -0.39
NR1I3-209ENST00000428574 HIRIP3Q9BW71 556 aaPredicted RBP12.59□□□□□ -0.39
NR1I3-209ENST00000428574 EID1Q9Y6B2 187 aa12.59□□□□□ -0.39
NR1I3-209ENST00000428574 YTHDC2Q9H6S0 1430 aaKnown RBP12.59□□□□□ -0.39
NR1I3-209ENST00000428574 ARHGEF28Q8N1W1 1705 aaKnown RBP12.59□□□□□ -0.39
NR1I3-209ENST00000428574 CENPJQ9HC77 1338 aaPredicted RBP12.59□□□□□ -0.39
NR1I3-209ENST00000428574 MED14O60244 1454 aa12.59□□□□□ -0.39
NR1I3-209ENST00000428574 LRPPRCP42704 1394 aaKnown RBP12.58□□□□□ -0.4
NR1I3-209ENST00000428574 ABCC11Q96J66 1382 aa12.58□□□□□ -0.4
NR1I3-209ENST00000428574 DDX10Q13206 875 aaKnown RBP12.58□□□□□ -0.4
NR1I3-209ENST00000428574 KNDC1Q76NI1 1749 aa12.58□□□□□ -0.4
NR1I3-209ENST00000428574 SIRT1Q96EB6 747 aa12.58□□□□□ -0.4
NR1I3-209ENST00000428574 FAM135BQ49AJ0 1406 aa12.57□□□□□ -0.4
NR1I3-209ENST00000428574 C11orf95C9JLR9 678 aaPredicted RBP12.57□□□□□ -0.4
NR1I3-209ENST00000428574 PIK3R4Q99570 1358 aa12.56□□□□□ -0.4
NR1I3-209ENST00000428574 CPS1P31327 1500 aa12.56□□□□□ -0.4
NR1I3-209ENST00000428574 KTN1Q86UP2 1357 aaKnown RBP12.56□□□□□ -0.4
NR1I3-209ENST00000428574 ADAMTS13Q76LX8 1427 aa12.55□□□□□ -0.4
NR1I3-209ENST00000428574 QRICH2Q9H0J4 1663 aa12.55□□□□□ -0.4
NR1I3-209ENST00000428574 DISP3Q9P2K9 1392 aa12.55□□□□□ -0.4
NR1I3-209ENST00000428574 NINLQ9Y2I6 1382 aa12.54□□□□□ -0.4
NR1I3-209ENST00000428574 TBX22Q9Y458 520 aa12.53□□□□□ -0.4
NR1I3-209ENST00000428574 CCER2I3L3R5 266 aa12.52□□□□□ -0.41
NR1I3-209ENST00000428574 ANP32CO43423 234 aa12.52□□□□□ -0.41
NR1I3-209ENST00000428574 PPP4R3CPQ6ZMV5 832 aa12.52□□□□□ -0.41
NR1I3-209ENST00000428574 TXNDC2Q86VQ3 553 aa12.52□□□□□ -0.41
NR1I3-209ENST00000428574 PTCH1Q13635 1447 aa12.52□□□□□ -0.41
NR1I3-209ENST00000428574 NUTM2DQ5VT03 806 aaPredicted RBP12.51□□□□□ -0.41
NR1I3-209ENST00000428574 TMEM132EQ6IEE7 984 aa12.51□□□□□ -0.41
NR1I3-209ENST00000428574 TRAK1Q9UPV9 953 aa12.51□□□□□ -0.41
NR1I3-209ENST00000428574 EVC2Q86UK5 1308 aa12.51□□□□□ -0.41
NR1I3-209ENST00000428574 LTKP29376 864 aa12.5□□□□□ -0.41
NR1I3-209ENST00000428574 MIER1Q8N108 512 aa12.5□□□□□ -0.41
NR1I3-209ENST00000428574 MYOM1P52179 1685 aa12.49□□□□□ -0.41
NR1I3-209ENST00000428574 ADGRB2O60241 1585 aa12.49□□□□□ -0.41
NR1I3-209ENST00000428574 METP08581 1390 aa12.49□□□□□ -0.41
NR1I3-209ENST00000428574 NPC1L1Q9UHC9 1359 aa12.49□□□□□ -0.41
NR1I3-209ENST00000428574 ANKLE2Q86XL3 938 aa12.49□□□□□ -0.41
NR1I3-209ENST00000428574 TULP4Q9NRJ4 1543 aa12.48□□□□□ -0.41
NR1I3-209ENST00000428574 ATAD2Q6PL18 1390 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms