RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 RIMS2Q9UQ26 1411 aa22.84■■□□□ 1.25
PHF1-204ENST00000427826 KCNA6P17658 529 aa22.84■■□□□ 1.25
PHF1-204ENST00000427826 PIP4K2BP78356 416 aa22.84■■□□□ 1.25
PHF1-204ENST00000427826 TMEM131LA2VDJ0 1609 aa22.83■■□□□ 1.25
PHF1-204ENST00000427826 PLEKHG1Q9ULL1 1385 aa22.82■■□□□ 1.24
PHF1-204ENST00000427826 STRCP1A6NGW2 1772 aa22.81■■□□□ 1.24
PHF1-204ENST00000427826 TRIM52Q96A61 297 aa22.8■■□□□ 1.24
PHF1-204ENST00000427826 TBX22Q9Y458 520 aa22.77■■□□□ 1.24
PHF1-204ENST00000427826 PROSER2Q86WR7 435 aaPredicted RBP22.75■■□□□ 1.23
PHF1-204ENST00000427826 MYO5BQ9ULV0 1848 aa22.74■■□□□ 1.23
PHF1-204ENST00000427826 HSPA1LP34931 641 aa22.73■■□□□ 1.23
PHF1-204ENST00000427826 TMEM94Q12767 1356 aa22.73■■□□□ 1.23
PHF1-204ENST00000427826 ZNF326Q5BKZ1 582 aaKnown RBP22.72■■□□□ 1.23
PHF1-204ENST00000427826 NUTM2DQ5VT03 806 aaPredicted RBP22.72■■□□□ 1.23
PHF1-204ENST00000427826 SLC4A1APQ9BWU0 796 aaKnown RBP22.72■■□□□ 1.23
PHF1-204ENST00000427826 SENP3Q9H4L4 574 aaPredicted RBP22.72■■□□□ 1.23
PHF1-204ENST00000427826 DISP3Q9P2K9 1392 aa22.72■■□□□ 1.23
PHF1-204ENST00000427826 SPHKAPQ2M3C7 1700 aa22.71■■□□□ 1.23
PHF1-204ENST00000427826 NKTRP30414 1462 aaKnown RBP22.71■■□□□ 1.23
PHF1-204ENST00000427826 ALKQ9UM73 1620 aa22.69■■□□□ 1.22
PHF1-204ENST00000427826 ACIN1Q9UKV3 1341 aaKnown RBP22.69■■□□□ 1.22
PHF1-204ENST00000427826 NWD1Q149M9 1564 aa22.68■■□□□ 1.22
PHF1-204ENST00000427826 TRPM2O94759 1503 aa22.68■■□□□ 1.22
PHF1-204ENST00000427826 PIK3R4Q99570 1358 aa22.68■■□□□ 1.22
PHF1-204ENST00000427826 DIP2AQ14689 1571 aa22.66■■□□□ 1.22
PHF1-204ENST00000427826 ADAMTS13Q76LX8 1427 aa22.65■■□□□ 1.22
PHF1-204ENST00000427826 RBM33Q96EV2 1170 aaKnown RBP22.63■■□□□ 1.21
PHF1-204ENST00000427826 XIRP1Q702N8 1843 aaKnown RBP22.63■■□□□ 1.21
PHF1-204ENST00000427826 MSH6P52701 1360 aa22.63■■□□□ 1.21
PHF1-204ENST00000427826 NCOA3Q9Y6Q9 1424 aa22.62■■□□□ 1.21
PHF1-204ENST00000427826 CLTCL1P53675 1640 aa22.61■■□□□ 1.21
PHF1-204ENST00000427826 FAM135BQ49AJ0 1406 aa22.61■■□□□ 1.21
PHF1-204ENST00000427826 CHD2O14647 1828 aaKnown RBP22.61■■□□□ 1.21
PHF1-204ENST00000427826 AMOTL2Q9Y2J4 779 aa22.59■■□□□ 1.21
PHF1-204ENST00000427826 RPGRIP1LQ68CZ1 1315 aa22.58■■□□□ 1.21
PHF1-204ENST00000427826 VGFO15240 615 aaPredicted RBP22.58■■□□□ 1.21
PHF1-204ENST00000427826 MPHOSPH9Q99550 1183 aa22.58■■□□□ 1.21
PHF1-204ENST00000427826 C14orf37Q86TY3 774 aa22.57■■□□□ 1.2
PHF1-204ENST00000427826 SETBP1Q9Y6X0 1596 aa22.57■■□□□ 1.2
PHF1-204ENST00000427826 KIF1BO60333 1816 aa22.56■■□□□ 1.2
PHF1-204ENST00000427826 SETD5Q9C0A6 1442 aa22.56■■□□□ 1.2
PHF1-204ENST00000427826 SLAIN2Q9P270 581 aa22.55■■□□□ 1.2
PHF1-204ENST00000427826 NEXMIFQ5QGS0 1516 aa22.55■■□□□ 1.2
PHF1-204ENST00000427826 FOXD1Q16676 465 aa22.54■■□□□ 1.2
PHF1-204ENST00000427826 C19orf44Q9H6X5 657 aa22.54■■□□□ 1.2
PHF1-204ENST00000427826 CADPS2Q86UW7 1296 aa22.52■■□□□ 1.2
PHF1-204ENST00000427826 CCDC144AA2RUR9 1427 aa22.51■■□□□ 1.19
PHF1-204ENST00000427826 PTPRUQ92729 1446 aa22.51■■□□□ 1.19
PHF1-204ENST00000427826 NRXN3Q9Y4C0 1643 aa22.5■■□□□ 1.19
PHF1-204ENST00000427826 ATF3P18847 181 aa22.5■■□□□ 1.19
PHF1-204ENST00000427826 METP08581 1390 aa22.5■■□□□ 1.19
PHF1-204ENST00000427826 ILDR2Q71H61 639 aa22.48■■□□□ 1.19
PHF1-204ENST00000427826 MED1Q15648 1581 aaPredicted RBP22.46■■□□□ 1.19
PHF1-204ENST00000427826 ROBO1Q9Y6N7 1651 aa22.45■■□□□ 1.18
PHF1-204ENST00000427826 RAB3GAP2Q9H2M9 1393 aa22.44■■□□□ 1.18
PHF1-204ENST00000427826 RGL3Q3MIN7 710 aa22.43■■□□□ 1.18
PHF1-204ENST00000427826 XRN1Q8IZH2 1706 aaKnown RBP22.43■■□□□ 1.18
PHF1-204ENST00000427826 PHF23Q9BUL5 403 aaPredicted RBP22.42■■□□□ 1.18
PHF1-204ENST00000427826 DCCP43146 1447 aa22.41■■□□□ 1.18
PHF1-204ENST00000427826 ANKRD30BQ9BXX2 1392 aa22.41■■□□□ 1.18
PHF1-204ENST00000427826 SPATA31E1Q6ZUB1 1445 aa22.4■■□□□ 1.18
PHF1-204ENST00000427826 HRCP23327 699 aa22.4■■□□□ 1.18
PHF1-204ENST00000427826 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.4■■□□□ 1.18
PHF1-204ENST00000427826 SOCS7O14512 581 aa22.37■■□□□ 1.17
PHF1-204ENST00000427826 PPLO60437 1756 aa22.37■■□□□ 1.17
PHF1-204ENST00000427826 PTCH1Q13635 1447 aa22.36■■□□□ 1.17
PHF1-204ENST00000427826 ADGRF5Q8IZF2 1346 aa22.35■■□□□ 1.17
PHF1-204ENST00000427826 ADGRL3Q9HAR2 1447 aa22.35■■□□□ 1.17
PHF1-204ENST00000427826 PRAG1Q86YV5 1406 aa22.33■■□□□ 1.17
PHF1-204ENST00000427826 JCADQ9P266 1359 aa22.33■■□□□ 1.17
PHF1-204ENST00000427826 BRINP3Q76B58 766 aa22.32■■□□□ 1.16
PHF1-204ENST00000427826 ROBO2Q9HCK4 1378 aa22.31■■□□□ 1.16
PHF1-204ENST00000427826 SETD1AO15047 1707 aaKnown RBP22.31■■□□□ 1.16
PHF1-204ENST00000427826 PHLPP1O60346 1717 aa22.31■■□□□ 1.16
PHF1-204ENST00000427826 MST1RQ04912 1400 aa22.3■■□□□ 1.16
PHF1-204ENST00000427826 AHDC1Q5TGY3 1603 aaPredicted RBP22.28■■□□□ 1.16
PHF1-204ENST00000427826 PIK3C2GO75747 1445 aa22.27■■□□□ 1.16
PHF1-204ENST00000427826 IFT172Q9UG01 1749 aa22.25■■□□□ 1.15
PHF1-204ENST00000427826 SPATA31A6Q5VVP1 1343 aa22.25■■□□□ 1.15
PHF1-204ENST00000427826 LRPPRCP42704 1394 aaKnown RBP22.25■■□□□ 1.15
PHF1-204ENST00000427826 COL16A1Q07092 1604 aaPredicted RBP22.24■■□□□ 1.15
PHF1-204ENST00000427826 C14orf93Q9H972 538 aaKnown RBP22.24■■□□□ 1.15
PHF1-204ENST00000427826 STK26Q9P289 416 aa22.24■■□□□ 1.15
PHF1-204ENST00000427826 ASXL1Q8IXJ9 1541 aa22.24■■□□□ 1.15
PHF1-204ENST00000427826 ABCC11Q96J66 1382 aa22.24■■□□□ 1.15
PHF1-204ENST00000427826 TMEM132EQ6IEE7 984 aa22.23■■□□□ 1.15
PHF1-204ENST00000427826 NALCNQ8IZF0 1738 aa22.23■■□□□ 1.15
PHF1-204ENST00000427826 TECPR2O15040 1411 aa22.23■■□□□ 1.15
PHF1-204ENST00000427826 MYOM2P54296 1465 aa22.22■■□□□ 1.15
PHF1-204ENST00000427826 C1orf167Q5SNV9 1468 aa22.22■■□□□ 1.15
PHF1-204ENST00000427826 LRRC59Q96AG4 307 aaKnown RBP22.21■■□□□ 1.15
PHF1-204ENST00000427826 RGS17Q9UGC6 210 aaPredicted RBP22.21■■□□□ 1.15
PHF1-204ENST00000427826 NRXN1Q9ULB1 1477 aa22.21■■□□□ 1.15
PHF1-204ENST00000427826 SIRT1Q96EB6 747 aa22.2■■□□□ 1.14
PHF1-204ENST00000427826 STAC3Q96MF2 364 aa22.2■■□□□ 1.14
PHF1-204ENST00000427826 DHX57Q6P158 1386 aaKnown RBP22.19■■□□□ 1.14
PHF1-204ENST00000427826 YTHDC2Q9H6S0 1430 aaKnown RBP22.18■■□□□ 1.14
PHF1-204ENST00000427826 WAPLQ7Z5K2 1190 aa22.18■■□□□ 1.14
PHF1-204ENST00000427826 CFAP70Q5T0N1 1121 aa22.17■■□□□ 1.14
PHF1-204ENST00000427826 MEX3CQ5U5Q3 659 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms