RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SPATA31D1Q6ZQQ2 1576 aa21.22■□□□□ 0.99
ACTB-204ENST00000425660 PPLO60437 1756 aa21.21■□□□□ 0.99
ACTB-204ENST00000425660 ADGRF5Q8IZF2 1346 aa21.21■□□□□ 0.99
ACTB-204ENST00000425660 FBXO31Q5XUX0 539 aaPredicted RBP21.19■□□□□ 0.98
ACTB-204ENST00000425660 PIK3C2GO75747 1445 aa21.18■□□□□ 0.98
ACTB-204ENST00000425660 CHGAP10645 457 aaKnown RBP21.18■□□□□ 0.98
ACTB-204ENST00000425660 MLECQ14165 292 aa21.18■□□□□ 0.98
ACTB-204ENST00000425660 IQGAP1P46940 1657 aa21.18■□□□□ 0.98
ACTB-204ENST00000425660 TMEM131LA2VDJ0 1609 aa21.18■□□□□ 0.98
ACTB-204ENST00000425660 NEXMIFQ5QGS0 1516 aa21.17■□□□□ 0.98
ACTB-204ENST00000425660 SCAF11Q99590 1463 aaKnown RBP21.17■□□□□ 0.98
ACTB-204ENST00000425660 ZFYVE9O95405 1425 aa21.16■□□□□ 0.98
ACTB-204ENST00000425660 ZMYM3Q14202 1370 aa21.16■□□□□ 0.98
ACTB-204ENST00000425660 TESK2Q96S53 571 aa21.15■□□□□ 0.98
ACTB-204ENST00000425660 SETBP1Q9Y6X0 1596 aa21.13■□□□□ 0.97
ACTB-204ENST00000425660 ANP32CO43423 234 aa21.13■□□□□ 0.97
ACTB-204ENST00000425660 ESF1Q9H501 851 aaKnown RBP21.13■□□□□ 0.97
ACTB-204ENST00000425660 VGFO15240 615 aaPredicted RBP21.12■□□□□ 0.97
ACTB-204ENST00000425660 CFAP70Q5T0N1 1121 aa21.12■□□□□ 0.97
ACTB-204ENST00000425660 C14orf93Q9H972 538 aaKnown RBP21.11■□□□□ 0.97
ACTB-204ENST00000425660 EIF3AQ14152 1382 aaKnown RBP21.09■□□□□ 0.97
ACTB-204ENST00000425660 ADGRB1O14514 1584 aa21.08■□□□□ 0.96
ACTB-204ENST00000425660 CCER2I3L3R5 266 aa21.08■□□□□ 0.96
ACTB-204ENST00000425660 A2ML1A8K2U0 1454 aa21.06■□□□□ 0.96
ACTB-204ENST00000425660 MYO5BQ9ULV0 1848 aa21.06■□□□□ 0.96
ACTB-204ENST00000425660 DISP3Q9P2K9 1392 aa21.04■□□□□ 0.96
ACTB-204ENST00000425660 TMF1P82094 1093 aa21.04■□□□□ 0.96
ACTB-204ENST00000425660 MYO3AQ8NEV4 1616 aa21.02■□□□□ 0.95
ACTB-204ENST00000425660 TNRQ92752 1358 aa21.02■□□□□ 0.95
ACTB-204ENST00000425660 SLC24A1O60721 1099 aa21.01■□□□□ 0.95
ACTB-204ENST00000425660 KDM5AP29375 1690 aaKnown RBP21.01■□□□□ 0.95
ACTB-204ENST00000425660 SBNO2Q9Y2G9 1366 aa21.01■□□□□ 0.95
ACTB-204ENST00000425660 STAG3Q9UJ98 1225 aa20.99■□□□□ 0.95
ACTB-204ENST00000425660 POLR3GLQ9BT43 218 aa20.99■□□□□ 0.95
ACTB-204ENST00000425660 PRKRIP1Q9H875 184 aaPredicted RBP20.99■□□□□ 0.95
ACTB-204ENST00000425660 NUTM2DQ5VT03 806 aaPredicted RBP20.98■□□□□ 0.95
ACTB-204ENST00000425660 FER1L4A9Z1Z3 1794 aa20.96■□□□□ 0.95
ACTB-204ENST00000425660 NLRP1Q9C000 1473 aa20.96■□□□□ 0.95
ACTB-204ENST00000425660 CDCA8Q53HL2 280 aa20.96■□□□□ 0.95
ACTB-204ENST00000425660 RIMS2Q9UQ26 1411 aa20.95■□□□□ 0.94
ACTB-204ENST00000425660 CENPBP07199 599 aaPredicted RBP20.94■□□□□ 0.94
ACTB-204ENST00000425660 YTHDC1Q96MU7 727 aaKnown RBP20.94■□□□□ 0.94
ACTB-204ENST00000425660 C3P01024 1663 aa20.94■□□□□ 0.94
ACTB-204ENST00000425660 ASXL1Q8IXJ9 1541 aa20.94■□□□□ 0.94
ACTB-204ENST00000425660 TMEM132EQ6IEE7 984 aa20.93■□□□□ 0.94
ACTB-204ENST00000425660 PLPPR3Q6T4P5 718 aa20.93■□□□□ 0.94
ACTB-204ENST00000425660 CENPJQ9HC77 1338 aaPredicted RBP20.92■□□□□ 0.94
ACTB-204ENST00000425660 UBR1Q8IWV7 1749 aa20.91■□□□□ 0.94
ACTB-204ENST00000425660 ALKQ9UM73 1620 aa20.91■□□□□ 0.94
ACTB-204ENST00000425660 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.9■□□□□ 0.943e-11■■■■□ 24.1
ACTB-204ENST00000425660 TRAK1Q9UPV9 953 aa20.9■□□□□ 0.94
ACTB-204ENST00000425660 PER1O15534 1290 aaPredicted RBP20.89■□□□□ 0.93
ACTB-204ENST00000425660 CEBPAP49715 358 aaPredicted RBP20.89■□□□□ 0.93
ACTB-204ENST00000425660 TMEM2Q9UHN6 1383 aa20.89■□□□□ 0.93
ACTB-204ENST00000425660 ARHGEF28Q8N1W1 1705 aaKnown RBP20.88■□□□□ 0.93
ACTB-204ENST00000425660 KTN1Q86UP2 1357 aaKnown RBP20.88■□□□□ 0.93
ACTB-204ENST00000425660 HDGFP51858 240 aaKnown RBP20.87■□□□□ 0.93
ACTB-204ENST00000425660 QRICH2Q9H0J4 1663 aa20.86■□□□□ 0.93
ACTB-204ENST00000425660 YTHDC2Q9H6S0 1430 aaKnown RBP20.85■□□□□ 0.93
ACTB-204ENST00000425660 SETD1AO15047 1707 aaKnown RBP20.85■□□□□ 0.93
ACTB-204ENST00000425660 PTPRMP28827 1452 aa20.85■□□□□ 0.93
ACTB-204ENST00000425660 NRXN3Q9Y4C0 1643 aa20.85■□□□□ 0.93
ACTB-204ENST00000425660 MYOM1P52179 1685 aa20.84■□□□□ 0.93
ACTB-204ENST00000425660 PANK3Q9H999 370 aa20.83■□□□□ 0.93
ACTB-204ENST00000425660 ADAMTSL3P82987 1691 aa20.83■□□□□ 0.92
ACTB-204ENST00000425660 PUS7Q96PZ0 661 aaKnown RBP20.81■□□□□ 0.92
ACTB-204ENST00000425660 SLIT1O75093 1534 aa20.81■□□□□ 0.92
ACTB-204ENST00000425660 ARHGAP23Q9P227 1491 aa20.8■□□□□ 0.92
ACTB-204ENST00000425660 DLC1Q96QB1 1528 aa20.8■□□□□ 0.92
ACTB-204ENST00000425660 RALBP1Q15311 655 aa20.8■□□□□ 0.92
ACTB-204ENST00000425660 PARD3Q8TEW0 1356 aa20.79■□□□□ 0.92
ACTB-204ENST00000425660 KDM4FA0A1W2PPD8 638 aa20.78■□□□□ 0.92
ACTB-204ENST00000425660 LRPPRCP42704 1394 aaKnown RBP20.78■□□□□ 0.92
ACTB-204ENST00000425660 CCDC184Q52MB2 194 aa20.78■□□□□ 0.92
ACTB-204ENST00000425660 RIMS1Q86UR5 1692 aaKnown RBP20.77■□□□□ 0.92
ACTB-204ENST00000425660 ABCC11Q96J66 1382 aa20.77■□□□□ 0.92
ACTB-204ENST00000425660 PLEKHG1Q9ULL1 1385 aa20.77■□□□□ 0.92
ACTB-204ENST00000425660 TULP4Q9NRJ4 1543 aa20.76■□□□□ 0.91
ACTB-204ENST00000425660 STK26Q9P289 416 aa20.76■□□□□ 0.91
ACTB-204ENST00000425660 EVC2Q86UK5 1308 aa20.75■□□□□ 0.91
ACTB-204ENST00000425660 METP08581 1390 aa20.74■□□□□ 0.91
ACTB-204ENST00000425660 SENP3Q9H4L4 574 aaPredicted RBP20.74■□□□□ 0.91
ACTB-204ENST00000425660 MRS2Q9HD23 443 aa20.74■□□□□ 0.91
ACTB-204ENST00000425660 NPC1L1Q9UHC9 1359 aa20.74■□□□□ 0.91
ACTB-204ENST00000425660 LTKP29376 864 aa20.74■□□□□ 0.91
ACTB-204ENST00000425660 THEMISQ8N1K5 641 aaPredicted RBP20.74■□□□□ 0.91
ACTB-204ENST00000425660 ADAMTS13Q76LX8 1427 aa20.73■□□□□ 0.91
ACTB-204ENST00000425660 MYBBP1AQ9BQG0 1328 aaKnown RBP20.73■□□□□ 0.91
ACTB-204ENST00000425660 PRAM1Q96QH2 718 aa20.73■□□□□ 0.91
ACTB-204ENST00000425660 TECPR2O15040 1411 aa20.73■□□□□ 0.91
ACTB-204ENST00000425660 MED14O60244 1454 aa20.72■□□□□ 0.91
ACTB-204ENST00000425660 CEP170BQ9Y4F5 1589 aaPredicted RBP20.72■□□□□ 0.91
ACTB-204ENST00000425660 AMER1Q5JTC6 1135 aaPredicted RBP20.71■□□□□ 0.91
ACTB-204ENST00000425660 KNSTRNQ9Y448 316 aa20.71■□□□□ 0.91
ACTB-204ENST00000425660 EID1Q9Y6B2 187 aa20.71■□□□□ 0.91
ACTB-204ENST00000425660 TXNDC2Q86VQ3 553 aa20.7■□□□□ 0.9
ACTB-204ENST00000425660 SIRT1Q96EB6 747 aa20.7■□□□□ 0.9
ACTB-204ENST00000425660 BRD4O60885 1362 aaPredicted RBP20.7■□□□□ 0.9
ACTB-204ENST00000425660 KNDC1Q76NI1 1749 aa20.7■□□□□ 0.9
ACTB-204ENST00000425660 POGKQ9P215 609 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms