RNA–Protein interactions for RNA: ENST00000424235.1

SNHG17-205, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-205ENST00000424235 IQGAP3Q86VI3 1631 aa24.31■■□□□ 1.48
SNHG17-205ENST00000424235 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
SNHG17-205ENST00000424235 KDM5AP29375 1690 aaKnown RBP24.27■■□□□ 1.48
SNHG17-205ENST00000424235 TRIM52Q96A61 297 aa24.27■■□□□ 1.48
SNHG17-205ENST00000424235 E9PCH4 1651 aa24.27■■□□□ 1.48
SNHG17-205ENST00000424235 HDGFP51858 240 aaKnown RBP24.26■■□□□ 1.47
SNHG17-205ENST00000424235 SLC26A8Q96RN1 970 aa24.25■■□□□ 1.47
SNHG17-205ENST00000424235 NAIPQ13075 1403 aa24.21■■□□□ 1.47
SNHG17-205ENST00000424235 RIMS2Q9UQ26 1411 aa24.21■■□□□ 1.47
SNHG17-205ENST00000424235 NUTM2DQ5VT03 806 aaPredicted RBP24.21■■□□□ 1.47
SNHG17-205ENST00000424235 XIRP1Q702N8 1843 aaKnown RBP24.21■■□□□ 1.47
SNHG17-205ENST00000424235 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.18■■□□□ 1.46
SNHG17-205ENST00000424235 ZNF326Q5BKZ1 582 aaKnown RBP24.17■■□□□ 1.46
SNHG17-205ENST00000424235 TMEM131LA2VDJ0 1609 aa24.17■■□□□ 1.46
SNHG17-205ENST00000424235 MYO5BQ9ULV0 1848 aa24.17■■□□□ 1.46
SNHG17-205ENST00000424235 HFM1A2PYH4 1435 aa24.16■■□□□ 1.46
SNHG17-205ENST00000424235 ZFYVE9O95405 1425 aa24.13■■□□□ 1.45
SNHG17-205ENST00000424235 PROSER2Q86WR7 435 aaPredicted RBP24.13■■□□□ 1.45
SNHG17-205ENST00000424235 PLEKHG1Q9ULL1 1385 aa24.13■■□□□ 1.45
SNHG17-205ENST00000424235 SPHKAPQ2M3C7 1700 aa24.12■■□□□ 1.45
SNHG17-205ENST00000424235 KCNA6P17658 529 aa24.11■■□□□ 1.45
SNHG17-205ENST00000424235 SLC4A1APQ9BWU0 796 aaKnown RBP24.11■■□□□ 1.45
SNHG17-205ENST00000424235 RGS17Q9UGC6 210 aaPredicted RBP24.11■■□□□ 1.45
SNHG17-205ENST00000424235 RBM33Q96EV2 1170 aaKnown RBP24.09■■□□□ 1.45
SNHG17-205ENST00000424235 TMEM94Q12767 1356 aa24.08■■□□□ 1.45
SNHG17-205ENST00000424235 C14orf37Q86TY3 774 aa24.06■■□□□ 1.44
SNHG17-205ENST00000424235 NKTRP30414 1462 aaKnown RBP24.03■■□□□ 1.44
SNHG17-205ENST00000424235 TRPM2O94759 1503 aa24.02■■□□□ 1.44
SNHG17-205ENST00000424235 TBX22Q9Y458 520 aa24.01■■□□□ 1.43
SNHG17-205ENST00000424235 CLTCL1P53675 1640 aa24.01■■□□□ 1.43
SNHG17-205ENST00000424235 ROBO1Q9Y6N7 1651 aa24■■□□□ 1.43
SNHG17-205ENST00000424235 MSH6P52701 1360 aa24■■□□□ 1.43
SNHG17-205ENST00000424235 FAM135BQ49AJ0 1406 aa24■■□□□ 1.43
SNHG17-205ENST00000424235 NWD1Q149M9 1564 aa23.99■■□□□ 1.43
SNHG17-205ENST00000424235 FOXD1Q16676 465 aa23.98■■□□□ 1.43
SNHG17-205ENST00000424235 DIP2AQ14689 1571 aa23.98■■□□□ 1.43
SNHG17-205ENST00000424235 ADAMTS13Q76LX8 1427 aa23.95■■□□□ 1.42
SNHG17-205ENST00000424235 POTEAQ6S8J7 498 aa23.95■■□□□ 1.42
SNHG17-205ENST00000424235 KIF1BO60333 1816 aa23.95■■□□□ 1.42
SNHG17-205ENST00000424235 CHD2O14647 1828 aaKnown RBP23.91■■□□□ 1.42
SNHG17-205ENST00000424235 AMOTL2Q9Y2J4 779 aa23.91■■□□□ 1.42
SNHG17-205ENST00000424235 PIK3R4Q99570 1358 aa23.91■■□□□ 1.42
SNHG17-205ENST00000424235 MPHOSPH9Q99550 1183 aa23.9■■□□□ 1.42
SNHG17-205ENST00000424235 CCDC144AA2RUR9 1427 aa23.9■■□□□ 1.42
SNHG17-205ENST00000424235 SETD5Q9C0A6 1442 aa23.9■■□□□ 1.42
SNHG17-205ENST00000424235 SETD1AO15047 1707 aaKnown RBP23.89■■□□□ 1.41
SNHG17-205ENST00000424235 NEXMIFQ5QGS0 1516 aa23.89■■□□□ 1.41
SNHG17-205ENST00000424235 VGFO15240 615 aaPredicted RBP23.87■■□□□ 1.41
SNHG17-205ENST00000424235 ATF3P18847 181 aa23.87■■□□□ 1.41
SNHG17-205ENST00000424235 SETBP1Q9Y6X0 1596 aa23.86■■□□□ 1.41
SNHG17-205ENST00000424235 PHLPP1O60346 1717 aa23.86■■□□□ 1.41
SNHG17-205ENST00000424235 ACIN1Q9UKV3 1341 aaKnown RBP23.85■■□□□ 1.41
SNHG17-205ENST00000424235 RGL3Q3MIN7 710 aa23.85■■□□□ 1.41
SNHG17-205ENST00000424235 SLAIN2Q9P270 581 aa23.84■■□□□ 1.41
SNHG17-205ENST00000424235 PTPRUQ92729 1446 aa23.83■■□□□ 1.4
SNHG17-205ENST00000424235 RPGRIP1LQ68CZ1 1315 aa23.83■■□□□ 1.4
SNHG17-205ENST00000424235 METP08581 1390 aa23.82■■□□□ 1.4
SNHG17-205ENST00000424235 NRXN3Q9Y4C0 1643 aa23.82■■□□□ 1.4
SNHG17-205ENST00000424235 RAB3GAP2Q9H2M9 1393 aa23.81■■□□□ 1.4
SNHG17-205ENST00000424235 CADPS2Q86UW7 1296 aa23.81■■□□□ 1.4
SNHG17-205ENST00000424235 C19orf44Q9H6X5 657 aa23.81■■□□□ 1.4
SNHG17-205ENST00000424235 NCOA3Q9Y6Q9 1424 aa23.8■■□□□ 1.4
SNHG17-205ENST00000424235 COL16A1Q07092 1604 aaPredicted RBP23.77■■□□□ 1.4
SNHG17-205ENST00000424235 XRN1Q8IZH2 1706 aaKnown RBP23.75■■□□□ 1.39
SNHG17-205ENST00000424235 JCADQ9P266 1359 aa23.75■■□□□ 1.39
SNHG17-205ENST00000424235 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.73■■□□□ 1.39
SNHG17-205ENST00000424235 PPLO60437 1756 aa23.72■■□□□ 1.39
SNHG17-205ENST00000424235 LRP6O75581 1613 aa23.71■■□□□ 1.39
SNHG17-205ENST00000424235 ANKRD30BQ9BXX2 1392 aa23.69■■□□□ 1.38
SNHG17-205ENST00000424235 ADGRF5Q8IZF2 1346 aa23.69■■□□□ 1.38
SNHG17-205ENST00000424235 DCCP43146 1447 aa23.67■■□□□ 1.38
SNHG17-205ENST00000424235 STK26Q9P289 416 aa23.67■■□□□ 1.38
SNHG17-205ENST00000424235 SPATA31E1Q6ZUB1 1445 aa23.67■■□□□ 1.38
SNHG17-205ENST00000424235 ADGRL3Q9HAR2 1447 aa23.67■■□□□ 1.38
SNHG17-205ENST00000424235 PTCH1Q13635 1447 aa23.64■■□□□ 1.37
SNHG17-205ENST00000424235 ROBO2Q9HCK4 1378 aa23.64■■□□□ 1.37
SNHG17-205ENST00000424235 SHPRHQ149N8 1683 aa23.64■■□□□ 1.37
SNHG17-205ENST00000424235 AHDC1Q5TGY3 1603 aaPredicted RBP23.63■■□□□ 1.37
SNHG17-205ENST00000424235 BRINP3Q76B58 766 aa23.62■■□□□ 1.37
SNHG17-205ENST00000424235 MEX3CQ5U5Q3 659 aaKnown RBP23.61■■□□□ 1.37
SNHG17-205ENST00000424235 NALCNQ8IZF0 1738 aa23.61■■□□□ 1.37
SNHG17-205ENST00000424235 SPATA31A6Q5VVP1 1343 aa23.6■■□□□ 1.37
SNHG17-205ENST00000424235 MST1RQ04912 1400 aa23.59■■□□□ 1.37
SNHG17-205ENST00000424235 TMEM132EQ6IEE7 984 aa23.59■■□□□ 1.37
SNHG17-205ENST00000424235 ASXL1Q8IXJ9 1541 aa23.59■■□□□ 1.37
SNHG17-205ENST00000424235 IFT172Q9UG01 1749 aa23.58■■□□□ 1.37
SNHG17-205ENST00000424235 PIK3C2GO75747 1445 aa23.57■■□□□ 1.36
SNHG17-205ENST00000424235 UPF1Q92900 1129 aaKnown RBP eCLIP23.56■■□□□ 1.36
SNHG17-205ENST00000424235 ZNF772Q68DY9 489 aaPredicted RBP23.55■■□□□ 1.36
SNHG17-205ENST00000424235 KDM2AQ9Y2K7 1162 aa23.55■■□□□ 1.36
SNHG17-205ENST00000424235 NUTM2BA6NNL0 878 aaPredicted RBP23.53■■□□□ 1.36
SNHG17-205ENST00000424235 NUTM2EB1AL46 878 aaPredicted RBP23.53■■□□□ 1.36
SNHG17-205ENST00000424235 HRCP23327 699 aa23.53■■□□□ 1.36
SNHG17-205ENST00000424235 NUTM2AQ8IVF1 878 aaPredicted RBP23.53■■□□□ 1.36
SNHG17-205ENST00000424235 LRPPRCP42704 1394 aaKnown RBP23.52■■□□□ 1.36
SNHG17-205ENST00000424235 WAPLQ7Z5K2 1190 aa23.52■■□□□ 1.36
SNHG17-205ENST00000424235 DDX17Q92841 729 aaKnown RBP23.52■■□□□ 1.36
SNHG17-205ENST00000424235 MYOM2P54296 1465 aa23.51■■□□□ 1.35
SNHG17-205ENST00000424235 C1orf167Q5SNV9 1468 aa23.51■■□□□ 1.35
SNHG17-205ENST00000424235 CFAP70Q5T0N1 1121 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms