RNA–Protein interactions for RNA: ENST00000423894.5

CMC1-204, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2 BASIC

Gene CMC1, Length 549 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-204ENST00000423894 RIMS2Q9UQ26 1411 aa21.78■■□□□ 1.08
CMC1-204ENST00000423894 HSPA1LP34931 641 aa21.77■■□□□ 1.08
CMC1-204ENST00000423894 KCNA6P17658 529 aa21.76■■□□□ 1.07
CMC1-204ENST00000423894 PPP1R15AO75807 674 aaPredicted RBP21.75■■□□□ 1.07
CMC1-204ENST00000423894 GCC2Q8IWJ2 1684 aa21.74■■□□□ 1.07
CMC1-204ENST00000423894 TMEM131LA2VDJ0 1609 aa21.73■■□□□ 1.07
CMC1-204ENST00000423894 ALKQ9UM73 1620 aa21.73■■□□□ 1.07
CMC1-204ENST00000423894 HFM1A2PYH4 1435 aa21.72■■□□□ 1.07
CMC1-204ENST00000423894 PLEKHG1Q9ULL1 1385 aa21.71■■□□□ 1.07
CMC1-204ENST00000423894 KDM5AP29375 1690 aaKnown RBP21.7■■□□□ 1.06
CMC1-204ENST00000423894 FOXD1Q16676 465 aa21.7■■□□□ 1.06
CMC1-204ENST00000423894 PROSER2Q86WR7 435 aaPredicted RBP21.7■■□□□ 1.06
CMC1-204ENST00000423894 HDGFP51858 240 aaKnown RBP21.69■■□□□ 1.06
CMC1-204ENST00000423894 TMEM94Q12767 1356 aa21.69■■□□□ 1.06
CMC1-204ENST00000423894 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.68■■□□□ 1.06
CMC1-204ENST00000423894 MYO5BQ9ULV0 1848 aa21.68■■□□□ 1.06
CMC1-204ENST00000423894 SLC4A1APQ9BWU0 796 aaKnown RBP21.67■■□□□ 1.06
CMC1-204ENST00000423894 TBX22Q9Y458 520 aa21.67■■□□□ 1.06
CMC1-204ENST00000423894 DISP3Q9P2K9 1392 aa21.66■■□□□ 1.06
CMC1-204ENST00000423894 ZNF326Q5BKZ1 582 aaKnown RBP21.66■■□□□ 1.06
CMC1-204ENST00000423894 ADAMTS13Q76LX8 1427 aa21.65■■□□□ 1.06
CMC1-204ENST00000423894 ILDR2Q71H61 639 aa21.63■■□□□ 1.05
CMC1-204ENST00000423894 MPHOSPH9Q99550 1183 aa21.58■■□□□ 1.05
CMC1-204ENST00000423894 PTPRUQ92729 1446 aa21.57■■□□□ 1.04
CMC1-204ENST00000423894 AMOTL2Q9Y2J4 779 aa21.57■■□□□ 1.04
CMC1-204ENST00000423894 CLTCL1P53675 1640 aa21.57■■□□□ 1.04
CMC1-204ENST00000423894 XIRP1Q702N8 1843 aaKnown RBP21.56■■□□□ 1.04
CMC1-204ENST00000423894 SPHKAPQ2M3C7 1700 aa21.55■■□□□ 1.04
CMC1-204ENST00000423894 TRPM2O94759 1503 aa21.55■■□□□ 1.04
CMC1-204ENST00000423894 METP08581 1390 aa21.54■■□□□ 1.04
CMC1-204ENST00000423894 NWD1Q149M9 1564 aa21.53■■□□□ 1.04
CMC1-204ENST00000423894 NKTRP30414 1462 aaKnown RBP21.52■■□□□ 1.03
CMC1-204ENST00000423894 SLAIN2Q9P270 581 aa21.5■■□□□ 1.03
CMC1-204ENST00000423894 SETD5Q9C0A6 1442 aa21.49■■□□□ 1.03
CMC1-204ENST00000423894 C14orf37Q86TY3 774 aa21.49■■□□□ 1.03
CMC1-204ENST00000423894 MSH6P52701 1360 aa21.48■■□□□ 1.03
CMC1-204ENST00000423894 FAM135BQ49AJ0 1406 aa21.48■■□□□ 1.03
CMC1-204ENST00000423894 RGL3Q3MIN7 710 aa21.48■■□□□ 1.03
CMC1-204ENST00000423894 PIK3R4Q99570 1358 aa21.48■■□□□ 1.03
CMC1-204ENST00000423894 NEXMIFQ5QGS0 1516 aa21.47■■□□□ 1.03
CMC1-204ENST00000423894 CHD2O14647 1828 aaKnown RBP21.47■■□□□ 1.03
CMC1-204ENST00000423894 NRXN3Q9Y4C0 1643 aa21.46■■□□□ 1.03
CMC1-204ENST00000423894 RAB3GAP2Q9H2M9 1393 aa21.45■■□□□ 1.02
CMC1-204ENST00000423894 VGFO15240 615 aaPredicted RBP21.44■■□□□ 1.02
CMC1-204ENST00000423894 C19orf44Q9H6X5 657 aa21.44■■□□□ 1.02
CMC1-204ENST00000423894 SETBP1Q9Y6X0 1596 aa21.44■■□□□ 1.02
CMC1-204ENST00000423894 ADGRF5Q8IZF2 1346 aa21.43■■□□□ 1.02
CMC1-204ENST00000423894 DIP2AQ14689 1571 aa21.42■■□□□ 1.02
CMC1-204ENST00000423894 RPGRIP1LQ68CZ1 1315 aa21.42■■□□□ 1.02
CMC1-204ENST00000423894 NCOA3Q9Y6Q9 1424 aa21.39■■□□□ 1.02
CMC1-204ENST00000423894 ATF3P18847 181 aa21.39■■□□□ 1.01
CMC1-204ENST00000423894 CCDC144AA2RUR9 1427 aa21.38■■□□□ 1.01
CMC1-204ENST00000423894 SPATA31E1Q6ZUB1 1445 aa21.38■■□□□ 1.01
CMC1-204ENST00000423894 MED1Q15648 1581 aaPredicted RBP21.37■■□□□ 1.01
CMC1-204ENST00000423894 CADPS2Q86UW7 1296 aa21.37■■□□□ 1.01
CMC1-204ENST00000423894 ROBO2Q9HCK4 1378 aa21.36■■□□□ 1.01
CMC1-204ENST00000423894 ROBO1Q9Y6N7 1651 aa21.35■■□□□ 1.01
CMC1-204ENST00000423894 KIF1BO60333 1816 aa21.35■■□□□ 1.01
CMC1-204ENST00000423894 TMEM132EQ6IEE7 984 aa21.33■■□□□ 1.01
CMC1-204ENST00000423894 BRINP3Q76B58 766 aa21.33■■□□□ 1.01
CMC1-204ENST00000423894 RGS17Q9UGC6 210 aaPredicted RBP21.33■■□□□ 1.01
CMC1-204ENST00000423894 XRN1Q8IZH2 1706 aaKnown RBP21.32■■□□□ 1
CMC1-204ENST00000423894 STK26Q9P289 416 aa21.32■■□□□ 1
CMC1-204ENST00000423894 DDX17Q92841 729 aaKnown RBP21.31■■□□□ 1
CMC1-204ENST00000423894 PHF23Q9BUL5 403 aaPredicted RBP21.31■■□□□ 1
CMC1-204ENST00000423894 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.31■■□□□ 1
CMC1-204ENST00000423894 SOCS7O14512 581 aa21.3■■□□□ 1
CMC1-204ENST00000423894 ANKRD30BQ9BXX2 1392 aa21.27■■□□□ 1
CMC1-204ENST00000423894 WAPLQ7Z5K2 1190 aa21.27■■□□□ 1
CMC1-204ENST00000423894 MST1RQ04912 1400 aa21.27■■□□□ 1
CMC1-204ENST00000423894 ACIN1Q9UKV3 1341 aaKnown RBP21.26■□□□□ 0.99
CMC1-204ENST00000423894 ADGRL3Q9HAR2 1447 aa21.25■□□□□ 0.99
CMC1-204ENST00000423894 PPLO60437 1756 aa21.25■□□□□ 0.99
CMC1-204ENST00000423894 HRCP23327 699 aa21.24■□□□□ 0.99
CMC1-204ENST00000423894 CFAP70Q5T0N1 1121 aa21.24■□□□□ 0.99
CMC1-204ENST00000423894 SETD1AO15047 1707 aaKnown RBP21.24■□□□□ 0.99
CMC1-204ENST00000423894 ORAI2Q96SN7 254 aa21.23■□□□□ 0.99
CMC1-204ENST00000423894 DCCP43146 1447 aa21.22■□□□□ 0.99
CMC1-204ENST00000423894 PTCH1Q13635 1447 aa21.22■□□□□ 0.99
CMC1-204ENST00000423894 C14orf93Q9H972 538 aaKnown RBP21.22■□□□□ 0.99
CMC1-204ENST00000423894 JCADQ9P266 1359 aa21.22■□□□□ 0.99
CMC1-204ENST00000423894 PLEKHH1Q9ULM0 1364 aa21.22■□□□□ 0.99
CMC1-204ENST00000423894 PIK3C2GO75747 1445 aa21.21■□□□□ 0.99
CMC1-204ENST00000423894 POTEAQ6S8J7 498 aa21.2■□□□□ 0.98
CMC1-204ENST00000423894 KDM2AQ9Y2K7 1162 aa21.2■□□□□ 0.98
CMC1-204ENST00000423894 LRPPRCP42704 1394 aaKnown RBP21.2■□□□□ 0.98
CMC1-204ENST00000423894 PHLPP1O60346 1717 aa21.19■□□□□ 0.98
CMC1-204ENST00000423894 C1orf167Q5SNV9 1468 aa21.18■□□□□ 0.98
CMC1-204ENST00000423894 ASXL1Q8IXJ9 1541 aa21.18■□□□□ 0.98
CMC1-204ENST00000423894 COL16A1Q07092 1604 aaPredicted RBP21.18■□□□□ 0.98
CMC1-204ENST00000423894 NUTM2FA1L443 756 aa21.17■□□□□ 0.98
CMC1-204ENST00000423894 ABCC11Q96J66 1382 aa21.17■□□□□ 0.98
CMC1-204ENST00000423894 PRAG1Q86YV5 1406 aa21.17■□□□□ 0.98
CMC1-204ENST00000423894 NALCNQ8IZF0 1738 aa21.15■□□□□ 0.98
CMC1-204ENST00000423894 NUTM2BA6NNL0 878 aaPredicted RBP21.15■□□□□ 0.98
CMC1-204ENST00000423894 NUTM2EB1AL46 878 aaPredicted RBP21.15■□□□□ 0.98
CMC1-204ENST00000423894 NUTM2AQ8IVF1 878 aaPredicted RBP21.15■□□□□ 0.98
CMC1-204ENST00000423894 DCAF11Q8TEB1 546 aa21.15■□□□□ 0.98
CMC1-204ENST00000423894 AHDC1Q5TGY3 1603 aaPredicted RBP21.15■□□□□ 0.98
CMC1-204ENST00000423894 NRXN1Q9ULB1 1477 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms