RNA–Protein interactions for RNA: ENST00000423723.1

NCDN-204, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-204ENST00000423723 TBX22Q9Y458 520 aa17.35■□□□□ 0.37
NCDN-204ENST00000423723 LRRC7Q96NW7 1537 aa17.35■□□□□ 0.37
NCDN-204ENST00000423723 STRCP1A6NGW2 1772 aa17.34■□□□□ 0.37
NCDN-204ENST00000423723 TRIM52Q96A61 297 aa17.32■□□□□ 0.36
NCDN-204ENST00000423723 SLC4A1APQ9BWU0 796 aaKnown RBP17.32■□□□□ 0.36
NCDN-204ENST00000423723 TRPM2O94759 1503 aa17.31■□□□□ 0.36
NCDN-204ENST00000423723 UBAP1LF5GYI3 381 aa17.31■□□□□ 0.36
NCDN-204ENST00000423723 SLC26A8Q96RN1 970 aa17.31■□□□□ 0.36
NCDN-204ENST00000423723 MYO5BQ9ULV0 1848 aa17.31■□□□□ 0.36
NCDN-204ENST00000423723 SPHKAPQ2M3C7 1700 aa17.3■□□□□ 0.36
NCDN-204ENST00000423723 TOM1O60784 492 aa17.3■□□□□ 0.36
NCDN-204ENST00000423723 ADAMTS13Q76LX8 1427 aa17.3■□□□□ 0.36
NCDN-204ENST00000423723 MPHOSPH9Q99550 1183 aa17.29■□□□□ 0.36
NCDN-204ENST00000423723 SETD5Q9C0A6 1442 aa17.29■□□□□ 0.36
NCDN-204ENST00000423723 PIK3R4Q99570 1358 aa17.28■□□□□ 0.36
NCDN-204ENST00000423723 CHGAP10645 457 aaKnown RBP17.28■□□□□ 0.36
NCDN-204ENST00000423723 ALKQ9UM73 1620 aa17.28■□□□□ 0.36
NCDN-204ENST00000423723 CLTCL1P53675 1640 aa17.25■□□□□ 0.35
NCDN-204ENST00000423723 NWD1Q149M9 1564 aa17.25■□□□□ 0.35
NCDN-204ENST00000423723 PPP1R15AO75807 674 aaPredicted RBP17.25■□□□□ 0.35
NCDN-204ENST00000423723 RPGRIP1LQ68CZ1 1315 aa17.24■□□□□ 0.35
NCDN-204ENST00000423723 NKTRP30414 1462 aaKnown RBP17.24■□□□□ 0.35
NCDN-204ENST00000423723 NCOA3Q9Y6Q9 1424 aa17.23■□□□□ 0.35
NCDN-204ENST00000423723 DIP2AQ14689 1571 aa17.23■□□□□ 0.35
NCDN-204ENST00000423723 TMEM94Q12767 1356 aa17.22■□□□□ 0.35
NCDN-204ENST00000423723 CHD2O14647 1828 aaKnown RBP17.21■□□□□ 0.35
NCDN-204ENST00000423723 SETBP1Q9Y6X0 1596 aa17.21■□□□□ 0.35
NCDN-204ENST00000423723 NUTM2DQ5VT03 806 aaPredicted RBP17.21■□□□□ 0.35
NCDN-204ENST00000423723 NEXMIFQ5QGS0 1516 aa17.21■□□□□ 0.34
NCDN-204ENST00000423723 RAB3GAP2Q9H2M9 1393 aa17.2■□□□□ 0.34
NCDN-204ENST00000423723 XIRP1Q702N8 1843 aaKnown RBP17.2■□□□□ 0.34
NCDN-204ENST00000423723 ZEB1P37275 1124 aaPredicted RBP17.2■□□□□ 0.34
NCDN-204ENST00000423723 PROSER2Q86WR7 435 aaPredicted RBP17.2■□□□□ 0.34
NCDN-204ENST00000423723 VGFO15240 615 aaPredicted RBP17.19■□□□□ 0.34
NCDN-204ENST00000423723 FOXD1Q16676 465 aa17.19■□□□□ 0.34
NCDN-204ENST00000423723 BCANQ96GW7 911 aa17.19■□□□□ 0.34
NCDN-204ENST00000423723 ZNF326Q5BKZ1 582 aaKnown RBP17.18■□□□□ 0.34
NCDN-204ENST00000423723 SPATA31E1Q6ZUB1 1445 aa17.18■□□□□ 0.34
NCDN-204ENST00000423723 NRXN3Q9Y4C0 1643 aa17.18■□□□□ 0.34
NCDN-204ENST00000423723 PTPRUQ92729 1446 aa17.17■□□□□ 0.34
NCDN-204ENST00000423723 KIF1BO60333 1816 aa17.17■□□□□ 0.34
NCDN-204ENST00000423723 FAM135BQ49AJ0 1406 aa17.16■□□□□ 0.34
NCDN-204ENST00000423723 AMOTL2Q9Y2J4 779 aa17.16■□□□□ 0.34
NCDN-204ENST00000423723 METP08581 1390 aa17.15■□□□□ 0.34
NCDN-204ENST00000423723 CCDC144AA2RUR9 1427 aa17.14■□□□□ 0.33
NCDN-204ENST00000423723 HSPA1LP34931 641 aa17.14■□□□□ 0.33
NCDN-204ENST00000423723 PIP4K2BP78356 416 aa17.14■□□□□ 0.33
NCDN-204ENST00000423723 PRAG1Q86YV5 1406 aa17.13■□□□□ 0.33
NCDN-204ENST00000423723 ANKRD30BQ9BXX2 1392 aa17.12■□□□□ 0.33
NCDN-204ENST00000423723 RBM33Q96EV2 1170 aaKnown RBP17.11■□□□□ 0.33
NCDN-204ENST00000423723 SENP3Q9H4L4 574 aaPredicted RBP17.11■□□□□ 0.33
NCDN-204ENST00000423723 C19orf44Q9H6X5 657 aa17.11■□□□□ 0.33
NCDN-204ENST00000423723 SLAIN2Q9P270 581 aa17.09■□□□□ 0.33
NCDN-204ENST00000423723 MSH6P52701 1360 aa17.09■□□□□ 0.33
NCDN-204ENST00000423723 XRN1Q8IZH2 1706 aaKnown RBP17.08■□□□□ 0.32
NCDN-204ENST00000423723 ADGRF5Q8IZF2 1346 aa17.07■□□□□ 0.32
NCDN-204ENST00000423723 PPLO60437 1756 aa17.07■□□□□ 0.32
NCDN-204ENST00000423723 DCCP43146 1447 aa17.05■□□□□ 0.32
NCDN-204ENST00000423723 SETD1AO15047 1707 aaKnown RBP17.05■□□□□ 0.32
NCDN-204ENST00000423723 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
NCDN-204ENST00000423723 RGL3Q3MIN7 710 aa17.05■□□□□ 0.32
NCDN-204ENST00000423723 CADPS2Q86UW7 1296 aa17.05■□□□□ 0.32
NCDN-204ENST00000423723 NRXN1Q9ULB1 1477 aa17.04■□□□□ 0.32
NCDN-204ENST00000423723 PTCH1Q13635 1447 aa17.04■□□□□ 0.32
NCDN-204ENST00000423723 STAC3Q96MF2 364 aa17.02■□□□□ 0.32
NCDN-204ENST00000423723 PIK3C2GO75747 1445 aa17.02■□□□□ 0.31
NCDN-204ENST00000423723 C14orf93Q9H972 538 aaKnown RBP17.01■□□□□ 0.31
NCDN-204ENST00000423723 IFT172Q9UG01 1749 aa17.01■□□□□ 0.31
NCDN-204ENST00000423723 SIRT1Q96EB6 747 aa17■□□□□ 0.31
NCDN-204ENST00000423723 SIPA1L2Q9P2F8 1722 aaPredicted RBP17■□□□□ 0.31
NCDN-204ENST00000423723 ABCC11Q96J66 1382 aa17■□□□□ 0.31
NCDN-204ENST00000423723 ROBO2Q9HCK4 1378 aa17■□□□□ 0.31
NCDN-204ENST00000423723 TECPR2O15040 1411 aa16.99■□□□□ 0.31
NCDN-204ENST00000423723 ATF3P18847 181 aa16.99■□□□□ 0.31
NCDN-204ENST00000423723 MYOM2P54296 1465 aa16.99■□□□□ 0.31
NCDN-204ENST00000423723 ADGRL3Q9HAR2 1447 aa16.98■□□□□ 0.31
NCDN-204ENST00000423723 LRPPRCP42704 1394 aaKnown RBP16.97■□□□□ 0.31
NCDN-204ENST00000423723 ROBO1Q9Y6N7 1651 aa16.97■□□□□ 0.31
NCDN-204ENST00000423723 C14orf37Q86TY3 774 aa16.96■□□□□ 0.31
NCDN-204ENST00000423723 DISP3Q9P2K9 1392 aa16.96■□□□□ 0.31
NCDN-204ENST00000423723 MST1RQ04912 1400 aa16.96■□□□□ 0.3
NCDN-204ENST00000423723 BRINP3Q76B58 766 aa16.95■□□□□ 0.3
NCDN-204ENST00000423723 DHX57Q6P158 1386 aaKnown RBP16.93■□□□□ 0.3
NCDN-204ENST00000423723 ASXL1Q8IXJ9 1541 aa16.93■□□□□ 0.3
NCDN-204ENST00000423723 YTHDC2Q9H6S0 1430 aaKnown RBP16.91■□□□□ 0.3
NCDN-204ENST00000423723 CFAP70Q5T0N1 1121 aa16.91■□□□□ 0.3
NCDN-204ENST00000423723 TMEM132EQ6IEE7 984 aa16.91■□□□□ 0.3
NCDN-204ENST00000423723 AHDC1Q5TGY3 1603 aaPredicted RBP16.9■□□□□ 0.3
NCDN-204ENST00000423723 MED1Q15648 1581 aaPredicted RBP16.89■□□□□ 0.3
NCDN-204ENST00000423723 ILDR2Q71H61 639 aa16.89■□□□□ 0.29
NCDN-204ENST00000423723 C1orf167Q5SNV9 1468 aa16.88■□□□□ 0.29
NCDN-204ENST00000423723 JCADQ9P266 1359 aa16.88■□□□□ 0.29
NCDN-204ENST00000423723 NALCNQ8IZF0 1738 aa16.87■□□□□ 0.29
NCDN-204ENST00000423723 WAPLQ7Z5K2 1190 aa16.87■□□□□ 0.29
NCDN-204ENST00000423723 DCAF11Q8TEB1 546 aa16.87■□□□□ 0.29
NCDN-204ENST00000423723 COL16A1Q07092 1604 aaPredicted RBP16.87■□□□□ 0.29
NCDN-204ENST00000423723 ADGRB1O14514 1584 aa16.86■□□□□ 0.29
NCDN-204ENST00000423723 LAMC1P11047 1609 aa16.86■□□□□ 0.29
NCDN-204ENST00000423723 KNDC1Q76NI1 1749 aa16.86■□□□□ 0.29
NCDN-204ENST00000423723 STK26Q9P289 416 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms