RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 GCC1Q96CN9 775 aa4.69□□□□□ -1.66
TOP2A-201ENST00000423485 PRDM11Q9NQV5 511 aa4.69□□□□□ -1.66
TOP2A-201ENST00000423485 MIER1Q8N108 512 aa4.69□□□□□ -1.66
TOP2A-201ENST00000423485 USP21Q9UK80 565 aa4.69□□□□□ -1.66
TOP2A-201ENST00000423485 HDGFL2Q7Z4V5 671 aaPredicted RBP4.69□□□□□ -1.66
TOP2A-201ENST00000423485 ATAD2Q6PL18 1390 aa4.69□□□□□ -1.66
TOP2A-201ENST00000423485 PPM1GO15355 546 aaPredicted RBP4.68□□□□□ -1.66
TOP2A-201ENST00000423485 HSP90B1P14625 803 aaKnown RBP4.68□□□□□ -1.66
TOP2A-201ENST00000423485 STK26Q9P289 416 aa4.68□□□□□ -1.66
TOP2A-201ENST00000423485 KIF27Q86VH2 1401 aa4.68□□□□□ -1.66
TOP2A-201ENST00000423485 NBPF15Q8N660 670 aa4.68□□□□□ -1.66
TOP2A-201ENST00000423485 CCDC85CA6NKD9 419 aa4.68□□□□□ -1.66
TOP2A-201ENST00000423485 TAOK2Q9UL54 1235 aa4.68□□□□□ -1.66
TOP2A-201ENST00000423485 APBA3O96018 575 aa4.68□□□□□ -1.66
TOP2A-201ENST00000423485 AK7Q96M32 723 aa4.68□□□□□ -1.66
TOP2A-201ENST00000423485 CDC42BPAQ5VT25 1732 aa4.68□□□□□ -1.66
TOP2A-201ENST00000423485 ABT1Q9ULW3 272 aaKnown RBP4.67□□□□□ -1.66
TOP2A-201ENST00000423485 MBD5Q9P267 1494 aa4.67□□□□□ -1.66
TOP2A-201ENST00000423485 TULP1O00294 542 aaPredicted RBP4.67□□□□□ -1.66
TOP2A-201ENST00000423485 TOM1L2Q6ZVM7 507 aa4.67□□□□□ -1.66
TOP2A-201ENST00000423485 CUL7Q14999 1698 aa4.67□□□□□ -1.66
TOP2A-201ENST00000423485 CANXP27824 592 aaKnown RBP4.67□□□□□ -1.66
TOP2A-201ENST00000423485 CDCA8Q53HL2 280 aa4.67□□□□□ -1.66
TOP2A-201ENST00000423485 MGAQ8IWI9 3026 aa4.67□□□□□ -1.66
TOP2A-201ENST00000423485 GRIN2BQ13224 1484 aa4.67□□□□□ -1.66
TOP2A-201ENST00000423485 CCDC18Q5T9S5 1454 aa4.67□□□□□ -1.66
TOP2A-201ENST00000423485 TRANK1O15050 2925 aa4.67□□□□□ -1.66
TOP2A-201ENST00000423485 KCNJ4P48050 445 aa4.67□□□□□ -1.66
TOP2A-201ENST00000423485 MAPK8IP2Q13387 824 aaPredicted RBP4.67□□□□□ -1.66
TOP2A-201ENST00000423485 OTUD7BQ6GQQ9 843 aa4.67□□□□□ -1.66
TOP2A-201ENST00000423485 CABP1Q9NZU7 370 aa4.67□□□□□ -1.66
TOP2A-201ENST00000423485 LAMC3Q9Y6N6 1575 aa4.66□□□□□ -1.66
TOP2A-201ENST00000423485 CLSTN1O94985 981 aa4.66□□□□□ -1.66
TOP2A-201ENST00000423485 BCL2L13Q9BXK5 485 aa4.66□□□□□ -1.66
TOP2A-201ENST00000423485 AMPHP49418 695 aa4.66□□□□□ -1.66
TOP2A-201ENST00000423485 RBM6P78332 1123 aaKnown RBP4.66□□□□□ -1.66
TOP2A-201ENST00000423485 TCIRG1Q13488 830 aa4.66□□□□□ -1.66
TOP2A-201ENST00000423485 BICDL1Q6ZP65 573 aa4.66□□□□□ -1.66
TOP2A-201ENST00000423485 CDC42BPBQ9Y5S2 1711 aa4.66□□□□□ -1.66
TOP2A-201ENST00000423485 FANCAO15360 1455 aa4.66□□□□□ -1.66
TOP2A-201ENST00000423485 FGD5Q6ZNL6 1462 aa4.66□□□□□ -1.66
TOP2A-201ENST00000423485 NOP2P46087 812 aaKnown RBP4.66□□□□□ -1.66
TOP2A-201ENST00000423485 HIRIP3Q9BW71 556 aaPredicted RBP4.66□□□□□ -1.66
TOP2A-201ENST00000423485 KDM2BQ8NHM5 1336 aa4.66□□□□□ -1.66
TOP2A-201ENST00000423485 PRG4Q92954 1404 aaPredicted RBP4.66□□□□□ -1.66
TOP2A-201ENST00000423485 PLB1Q6P1J6 1458 aa4.65□□□□□ -1.66
TOP2A-201ENST00000423485 TAF7LQ5H9L4 462 aa4.65□□□□□ -1.66
TOP2A-201ENST00000423485 C1orf141Q5JVX7 400 aa4.65□□□□□ -1.66
TOP2A-201ENST00000423485 WDR70Q9NW82 654 aa4.65□□□□□ -1.66
TOP2A-201ENST00000423485 TOPBP1Q92547 1522 aa4.65□□□□□ -1.66
TOP2A-201ENST00000423485 RAPGEF4Q8WZA2 1011 aa4.65□□□□□ -1.66
TOP2A-201ENST00000423485 TFCP2L1Q9NZI6 479 aa4.65□□□□□ -1.66
TOP2A-201ENST00000423485 ABCA10Q8WWZ4 1543 aa4.65□□□□□ -1.66
TOP2A-201ENST00000423485 TTC5Q8N0Z6 440 aa4.65□□□□□ -1.67
TOP2A-201ENST00000423485 NAIPQ13075 1403 aa4.65□□□□□ -1.67
TOP2A-201ENST00000423485 CSPP1Q1MSJ5 1256 aa4.65□□□□□ -1.67
TOP2A-201ENST00000423485 RTF1Q92541 710 aaKnown RBP4.65□□□□□ -1.67
TOP2A-201ENST00000423485 CFAP53Q96M91 514 aa4.65□□□□□ -1.67
TOP2A-201ENST00000423485 BCL11AQ9H165 835 aa4.65□□□□□ -1.67
TOP2A-201ENST00000423485 JDP2Q8WYK2 163 aa4.65□□□□□ -1.67
TOP2A-201ENST00000423485 KIF14Q15058 1648 aa4.64□□□□□ -1.67
TOP2A-201ENST00000423485 APBB1O00213 710 aa4.64□□□□□ -1.67
TOP2A-201ENST00000423485 ARHGAP27Q6ZUM4 889 aa4.64□□□□□ -1.67
TOP2A-201ENST00000423485 PARP3Q9Y6F1 533 aa4.64□□□□□ -1.67
TOP2A-201ENST00000423485 RAPGEF3O95398 923 aa4.64□□□□□ -1.67
TOP2A-201ENST00000423485 CDCA7Q9BWT1 371 aaPredicted RBP4.64□□□□□ -1.67
TOP2A-201ENST00000423485 COL12A1Q99715 3063 aa4.64□□□□□ -1.67
TOP2A-201ENST00000423485 NUTM2FA1L443 756 aa4.64□□□□□ -1.67
TOP2A-201ENST00000423485 NLRP2Q9NX02 1062 aa4.64□□□□□ -1.67
TOP2A-201ENST00000423485 CD109Q6YHK3 1445 aa4.64□□□□□ -1.67
TOP2A-201ENST00000423485 SVEP1Q4LDE5 3571 aa4.64□□□□□ -1.67
TOP2A-201ENST00000423485 CTTNBP2Q8WZ74 1663 aa4.63□□□□□ -1.67
TOP2A-201ENST00000423485 ZPR1O75312 459 aa4.63□□□□□ -1.67
TOP2A-201ENST00000423485 KCNA4P22459 653 aa4.63□□□□□ -1.67
TOP2A-201ENST00000423485 AMOTL1Q8IY63 956 aa4.63□□□□□ -1.67
TOP2A-201ENST00000423485 CHIC2Q9UKJ5 165 aa4.63□□□□□ -1.67
TOP2A-201ENST00000423485 MYCNP04198 464 aaPredicted RBP4.63□□□□□ -1.67
TOP2A-201ENST00000423485 EAPPQ56P03 285 aaPredicted RBP4.63□□□□□ -1.67
TOP2A-201ENST00000423485 PNNQ9H307 717 aaKnown RBP4.63□□□□□ -1.67
TOP2A-201ENST00000423485 TMOD2Q9NZR1 351 aa4.63□□□□□ -1.67
TOP2A-201ENST00000423485 MAP3K1Q13233 1512 aa4.63□□□□□ -1.67
TOP2A-201ENST00000423485 FLAD1Q8NFF5 587 aa4.63□□□□□ -1.67
TOP2A-201ENST00000423485 TCEAL9Q9UHQ7 104 aa4.63□□□□□ -1.67
TOP2A-201ENST00000423485 MROH1Q8NDA8 1641 aa4.63□□□□□ -1.67
TOP2A-201ENST00000423485 MYOM1P52179 1685 aa4.63□□□□□ -1.67
TOP2A-201ENST00000423485 GAPVD1Q14C86 1478 aa4.63□□□□□ -1.67
TOP2A-201ENST00000423485 ARHGEF12Q9NZN5 1544 aa4.63□□□□□ -1.67
TOP2A-201ENST00000423485 THOC2Q8NI27 1593 aaKnown RBP4.63□□□□□ -1.67
TOP2A-201ENST00000423485 VGFO15240 615 aaPredicted RBP4.63□□□□□ -1.67
TOP2A-201ENST00000423485 ECE1P42892 770 aa4.63□□□□□ -1.67
TOP2A-201ENST00000423485 SKIV2LQ15477 1246 aaKnown RBP4.62□□□□□ -1.67
TOP2A-201ENST00000423485 WWC2Q6AWC2 1192 aa4.62□□□□□ -1.67
TOP2A-201ENST00000423485 CUBNO60494 3623 aa4.62□□□□□ -1.67
TOP2A-201ENST00000423485 SYNJ2O15056 1496 aa4.62□□□□□ -1.67
TOP2A-201ENST00000423485 SLC4A8Q2Y0W8 1093 aa4.62□□□□□ -1.67
TOP2A-201ENST00000423485 CCDC174Q6PII3 467 aa4.62□□□□□ -1.67
TOP2A-201ENST00000423485 EXOC5O00471 708 aa4.62□□□□□ -1.67
TOP2A-201ENST00000423485 CCDC87Q9NVE4 849 aa4.62□□□□□ -1.67
TOP2A-201ENST00000423485 LRRC9Q6ZRR7 1453 aa4.62□□□□□ -1.67
TOP2A-201ENST00000423485 WDR7Q9Y4E6 1490 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms