RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 RBM33Q96EV2 1170 aaKnown RBP14.02□□□□□ -0.17
NUP50-206ENST00000422489 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.01□□□□□ -0.17
NUP50-206ENST00000422489 LRRC7Q96NW7 1537 aa14□□□□□ -0.17
NUP50-206ENST00000422489 RRBP1Q9P2E9 1410 aaKnown RBP13.99□□□□□ -0.17
NUP50-206ENST00000422489 RIMS2Q9UQ26 1411 aa13.99□□□□□ -0.17
NUP50-206ENST00000422489 ZNF326Q5BKZ1 582 aaKnown RBP13.98□□□□□ -0.17
NUP50-206ENST00000422489 ADGRB3O60242 1522 aa13.98□□□□□ -0.17
NUP50-206ENST00000422489 TET3O43151 1660 aa13.98□□□□□ -0.17
NUP50-206ENST00000422489 UNC13BO14795 1591 aa13.97□□□□□ -0.17
NUP50-206ENST00000422489 TMEM94Q12767 1356 aa13.96□□□□□ -0.18
NUP50-206ENST00000422489 ILDR2Q71H61 639 aa13.95□□□□□ -0.18
NUP50-206ENST00000422489 TBX22Q9Y458 520 aa13.95□□□□□ -0.18
NUP50-206ENST00000422489 PLEKHG1Q9ULL1 1385 aa13.95□□□□□ -0.18
NUP50-206ENST00000422489 NAIPQ13075 1403 aa13.94□□□□□ -0.18
NUP50-206ENST00000422489 ZFYVE9O95405 1425 aa13.93□□□□□ -0.18
NUP50-206ENST00000422489 C14orf37Q86TY3 774 aa13.93□□□□□ -0.18
NUP50-206ENST00000422489 SLC4A1APQ9BWU0 796 aaKnown RBP13.93□□□□□ -0.18
NUP50-206ENST00000422489 IQGAP3Q86VI3 1631 aa13.93□□□□□ -0.18
NUP50-206ENST00000422489 STRCP1A6NGW2 1772 aa13.92□□□□□ -0.18
NUP50-206ENST00000422489 POTEDQ86YR6 584 aa13.92□□□□□ -0.18
NUP50-206ENST00000422489 E9PCH4 1651 aa13.91□□□□□ -0.18
NUP50-206ENST00000422489 KDM5AP29375 1690 aaKnown RBP13.91□□□□□ -0.18
NUP50-206ENST00000422489 GCC2Q8IWJ2 1684 aa13.91□□□□□ -0.18
NUP50-206ENST00000422489 TMEM131LA2VDJ0 1609 aa13.9□□□□□ -0.18
NUP50-206ENST00000422489 AMOTL2Q9Y2J4 779 aa13.89□□□□□ -0.19
NUP50-206ENST00000422489 MSH6P52701 1360 aa13.88□□□□□ -0.19
NUP50-206ENST00000422489 SLAIN2Q9P270 581 aa13.88□□□□□ -0.19
NUP50-206ENST00000422489 HFM1A2PYH4 1435 aa13.88□□□□□ -0.19
NUP50-206ENST00000422489 ALKQ9UM73 1620 aa13.87□□□□□ -0.19
NUP50-206ENST00000422489 ADAMTS13Q76LX8 1427 aa13.86□□□□□ -0.19
NUP50-206ENST00000422489 FAM135BQ49AJ0 1406 aa13.84□□□□□ -0.19
NUP50-206ENST00000422489 ATF3P18847 181 aa13.84□□□□□ -0.19
NUP50-206ENST00000422489 MPHOSPH9Q99550 1183 aa13.84□□□□□ -0.19
NUP50-206ENST00000422489 NKTRP30414 1462 aaKnown RBP13.83□□□□□ -0.2
NUP50-206ENST00000422489 SOCS7O14512 581 aa13.83□□□□□ -0.2
NUP50-206ENST00000422489 VGFO15240 615 aaPredicted RBP13.83□□□□□ -0.2
NUP50-206ENST00000422489 C19orf44Q9H6X5 657 aa13.83□□□□□ -0.2
NUP50-206ENST00000422489 PIK3R4Q99570 1358 aa13.83□□□□□ -0.2
NUP50-206ENST00000422489 RGL3Q3MIN7 710 aa13.82□□□□□ -0.2
NUP50-206ENST00000422489 MYO5BQ9ULV0 1848 aa13.82□□□□□ -0.2
NUP50-206ENST00000422489 CADPS2Q86UW7 1296 aa13.81□□□□□ -0.2
NUP50-206ENST00000422489 PTPRUQ92729 1446 aa13.8□□□□□ -0.2
NUP50-206ENST00000422489 NWD1Q149M9 1564 aa13.79□□□□□ -0.2
NUP50-206ENST00000422489 RPGRIP1LQ68CZ1 1315 aa13.79□□□□□ -0.2
NUP50-206ENST00000422489 METP08581 1390 aa13.79□□□□□ -0.2
NUP50-206ENST00000422489 NCOA3Q9Y6Q9 1424 aa13.78□□□□□ -0.2
NUP50-206ENST00000422489 TRPM2O94759 1503 aa13.78□□□□□ -0.2
NUP50-206ENST00000422489 SPHKAPQ2M3C7 1700 aa13.78□□□□□ -0.2
NUP50-206ENST00000422489 XIRP1Q702N8 1843 aaKnown RBP13.78□□□□□ -0.2
NUP50-206ENST00000422489 CLTCL1P53675 1640 aa13.77□□□□□ -0.21
NUP50-206ENST00000422489 DIP2AQ14689 1571 aa13.76□□□□□ -0.21
NUP50-206ENST00000422489 MED1Q15648 1581 aaPredicted RBP13.76□□□□□ -0.21
NUP50-206ENST00000422489 SETD5Q9C0A6 1442 aa13.76□□□□□ -0.21
NUP50-206ENST00000422489 CHD2O14647 1828 aaKnown RBP13.76□□□□□ -0.21
NUP50-206ENST00000422489 CCDC144AA2RUR9 1427 aa13.74□□□□□ -0.21
NUP50-206ENST00000422489 ACIN1Q9UKV3 1341 aaKnown RBP13.74□□□□□ -0.21
NUP50-206ENST00000422489 NEXMIFQ5QGS0 1516 aa13.74□□□□□ -0.21
NUP50-206ENST00000422489 STK26Q9P289 416 aa13.73□□□□□ -0.21
NUP50-206ENST00000422489 ADGRF5Q8IZF2 1346 aa13.72□□□□□ -0.21
NUP50-206ENST00000422489 BRINP3Q76B58 766 aa13.72□□□□□ -0.21
NUP50-206ENST00000422489 ROBO1Q9Y6N7 1651 aa13.72□□□□□ -0.21
NUP50-206ENST00000422489 SETBP1Q9Y6X0 1596 aa13.71□□□□□ -0.21
NUP50-206ENST00000422489 RGS17Q9UGC6 210 aaPredicted RBP13.7□□□□□ -0.22
NUP50-206ENST00000422489 RAB3GAP2Q9H2M9 1393 aa13.7□□□□□ -0.22
NUP50-206ENST00000422489 JCADQ9P266 1359 aa13.7□□□□□ -0.22
NUP50-206ENST00000422489 NRXN3Q9Y4C0 1643 aa13.69□□□□□ -0.22
NUP50-206ENST00000422489 MEX3CQ5U5Q3 659 aaKnown RBP13.69□□□□□ -0.22
NUP50-206ENST00000422489 TMEM132EQ6IEE7 984 aa13.69□□□□□ -0.22
NUP50-206ENST00000422489 NUTM2BA6NNL0 878 aaPredicted RBP13.68□□□□□ -0.22
NUP50-206ENST00000422489 NUTM2EB1AL46 878 aaPredicted RBP13.68□□□□□ -0.22
NUP50-206ENST00000422489 NUTM2AQ8IVF1 878 aaPredicted RBP13.68□□□□□ -0.22
NUP50-206ENST00000422489 KIF1BO60333 1816 aa13.68□□□□□ -0.22
NUP50-206ENST00000422489 ROBO2Q9HCK4 1378 aa13.68□□□□□ -0.22
NUP50-206ENST00000422489 DDX17Q92841 729 aaKnown RBP13.67□□□□□ -0.22
NUP50-206ENST00000422489 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.67□□□□□ -0.22
NUP50-206ENST00000422489 WAPLQ7Z5K2 1190 aa13.66□□□□□ -0.22
NUP50-206ENST00000422489 ANKRD30BQ9BXX2 1392 aa13.66□□□□□ -0.22
NUP50-206ENST00000422489 POTEAQ6S8J7 498 aa13.65□□□□□ -0.22
NUP50-206ENST00000422489 LRRC59Q96AG4 307 aaKnown RBP13.65□□□□□ -0.22
NUP50-206ENST00000422489 ORAI2Q96SN7 254 aa13.65□□□□□ -0.22
NUP50-206ENST00000422489 DCCP43146 1447 aa13.64□□□□□ -0.23
NUP50-206ENST00000422489 MST1RQ04912 1400 aa13.64□□□□□ -0.23
NUP50-206ENST00000422489 SPATA31E1Q6ZUB1 1445 aa13.64□□□□□ -0.23
NUP50-206ENST00000422489 ADGRL3Q9HAR2 1447 aa13.64□□□□□ -0.23
NUP50-206ENST00000422489 KDM2AQ9Y2K7 1162 aa13.64□□□□□ -0.23
NUP50-206ENST00000422489 PHLPP1O60346 1717 aa13.64□□□□□ -0.23
NUP50-206ENST00000422489 SPATA31A6Q5VVP1 1343 aa13.64□□□□□ -0.23
NUP50-206ENST00000422489 NUTM2FA1L443 756 aa13.63□□□□□ -0.23
NUP50-206ENST00000422489 CFAP70Q5T0N1 1121 aa13.63□□□□□ -0.23
NUP50-206ENST00000422489 XRN1Q8IZH2 1706 aaKnown RBP13.63□□□□□ -0.23
NUP50-206ENST00000422489 ESCO1Q5FWF5 840 aa13.62□□□□□ -0.23
NUP50-206ENST00000422489 HRCP23327 699 aa13.61□□□□□ -0.23
NUP50-206ENST00000422489 C14orf93Q9H972 538 aaKnown RBP13.61□□□□□ -0.23
NUP50-206ENST00000422489 PTCH1Q13635 1447 aa13.61□□□□□ -0.23
NUP50-206ENST00000422489 LRPPRCP42704 1394 aaKnown RBP13.6□□□□□ -0.23
NUP50-206ENST00000422489 DCAF11Q8TEB1 546 aa13.6□□□□□ -0.23
NUP50-206ENST00000422489 C1orf167Q5SNV9 1468 aa13.6□□□□□ -0.23
NUP50-206ENST00000422489 ASXL1Q8IXJ9 1541 aa13.59□□□□□ -0.23
NUP50-206ENST00000422489 DHX57Q6P158 1386 aaKnown RBP13.58□□□□□ -0.23
NUP50-206ENST00000422489 COL16A1Q07092 1604 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms