RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.3□□□□□ -1.24
CNGA1-203ENST00000420489 SOX12O15370 315 aa7.3□□□□□ -1.24
CNGA1-203ENST00000420489 ABCC3O15438 1527 aa7.3□□□□□ -1.24
CNGA1-203ENST00000420489 PRELPP51888 382 aa7.29□□□□□ -1.24
CNGA1-203ENST00000420489 C1QTNF8P60827 252 aa7.29□□□□□ -1.24
CNGA1-203ENST00000420489 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.29□□□□□ -1.24
CNGA1-203ENST00000420489 SPHKAPQ2M3C7 1700 aa7.29□□□□□ -1.24
CNGA1-203ENST00000420489 A2ML1A8K2U0 1454 aa7.29□□□□□ -1.24
CNGA1-203ENST00000420489 HECW1Q76N89 1606 aa7.29□□□□□ -1.24
CNGA1-203ENST00000420489 ECM2O94769 699 aaPredicted RBP7.29□□□□□ -1.24
CNGA1-203ENST00000420489 SNPHO15079 494 aa7.29□□□□□ -1.24
CNGA1-203ENST00000420489 RXRBP28702 533 aa7.29□□□□□ -1.24
CNGA1-203ENST00000420489 CABP2Q9NPB3 220 aa7.29□□□□□ -1.24
CNGA1-203ENST00000420489 ARHGAP23Q9P227 1491 aa7.28□□□□□ -1.24
CNGA1-203ENST00000420489 POTEJP0CG39 1038 aa7.28□□□□□ -1.24
CNGA1-203ENST00000420489 PIP4K2BP78356 416 aa7.28□□□□□ -1.24
CNGA1-203ENST00000420489 AATKQ6ZMQ8 1374 aa7.26□□□□□ -1.25
CNGA1-203ENST00000420489 C3orf67Q6ZVT6 689 aa7.25□□□□□ -1.25
CNGA1-203ENST00000420489 BCL9LQ86UU0 1499 aa7.25□□□□□ -1.25
CNGA1-203ENST00000420489 PDCD7Q8N8D1 485 aaKnown RBP7.25□□□□□ -1.25
CNGA1-203ENST00000420489 GOLGA3Q08378 1498 aa7.24□□□□□ -1.25
CNGA1-203ENST00000420489 SLAIN1Q8ND83 568 aa7.24□□□□□ -1.25
CNGA1-203ENST00000420489 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.23□□□□□ -1.25
CNGA1-203ENST00000420489 ZFP91Q96JP5 570 aaPredicted RBP7.23□□□□□ -1.25
CNGA1-203ENST00000420489 NINLQ9Y2I6 1382 aa7.23□□□□□ -1.25
CNGA1-203ENST00000420489 RGS12O14924 1447 aa7.23□□□□□ -1.25
CNGA1-203ENST00000420489 DNMT1P26358 1616 aaKnown RBP7.22□□□□□ -1.25
CNGA1-203ENST00000420489 AHDC1Q5TGY3 1603 aaPredicted RBP7.22□□□□□ -1.25
CNGA1-203ENST00000420489 PHLPP1O60346 1717 aa7.22□□□□□ -1.25
CNGA1-203ENST00000420489 COL16A1Q07092 1604 aaPredicted RBP7.22□□□□□ -1.25
CNGA1-203ENST00000420489 NLRP6P59044 892 aa7.21□□□□□ -1.25
CNGA1-203ENST00000420489 XIRP1Q702N8 1843 aaKnown RBP7.21□□□□□ -1.26
CNGA1-203ENST00000420489 IQGAP1P46940 1657 aa7.21□□□□□ -1.26
CNGA1-203ENST00000420489 BOLA1Q9Y3E2 137 aa7.21□□□□□ -1.26
CNGA1-203ENST00000420489 ATP7AQ04656 1500 aa7.2□□□□□ -1.26
CNGA1-203ENST00000420489 EFCAB3Q8N7B9 438 aa7.2□□□□□ -1.26
CNGA1-203ENST00000420489 RNF25Q96BH1 459 aaPredicted RBP7.2□□□□□ -1.26
CNGA1-203ENST00000420489 NCKAP5LQ9HCH0 1330 aa7.2□□□□□ -1.26
CNGA1-203ENST00000420489 RALGAPBQ86X10 1494 aa7.2□□□□□ -1.26
CNGA1-203ENST00000420489 ROBO1Q9Y6N7 1651 aa7.19□□□□□ -1.26
CNGA1-203ENST00000420489 RBM6P78332 1123 aaKnown RBP7.19□□□□□ -1.26
CNGA1-203ENST00000420489 BLMP54132 1417 aaPredicted RBP7.19□□□□□ -1.26
CNGA1-203ENST00000420489 DIP2CQ9Y2E4 1556 aa7.19□□□□□ -1.26
CNGA1-203ENST00000420489 MLH3Q9UHC1 1453 aa7.18□□□□□ -1.26
CNGA1-203ENST00000420489 STK24Q9Y6E0 443 aa7.17□□□□□ -1.26
CNGA1-203ENST00000420489 BCL11BQ9C0K0 894 aaPredicted RBP7.17□□□□□ -1.26
CNGA1-203ENST00000420489 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.17□□□□□ -1.26
CNGA1-203ENST00000420489 STRCP1A6NGW2 1772 aa7.17□□□□□ -1.26
CNGA1-203ENST00000420489 FAM163AQ96GL9 167 aaPredicted RBP7.16□□□□□ -1.26
CNGA1-203ENST00000420489 NCOA3Q9Y6Q9 1424 aa7.16□□□□□ -1.26
CNGA1-203ENST00000420489 STK25O00506 426 aa7.16□□□□□ -1.26
CNGA1-203ENST00000420489 NPHP4O75161 1426 aaPredicted RBP7.16□□□□□ -1.26
CNGA1-203ENST00000420489 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.16□□□□□ -1.26
CNGA1-203ENST00000420489 NGLY1Q96IV0 654 aa7.16□□□□□ -1.26
CNGA1-203ENST00000420489 TMEM121BQ9BXQ6 578 aaPredicted RBP7.16□□□□□ -1.26
CNGA1-203ENST00000420489 ZC3H13Q5T200 1668 aaKnown RBP7.16□□□□□ -1.26
CNGA1-203ENST00000420489 RTEL1-TNFRSF6BF6WH68 1400 aa7.15□□□□□ -1.26
CNGA1-203ENST00000420489 LRP6O75581 1613 aa7.15□□□□□ -1.26
CNGA1-203ENST00000420489 ZNF518AQ6AHZ1 1483 aa7.15□□□□□ -1.26
CNGA1-203ENST00000420489 RYDENQ9NUL5 291 aaKnown RBP7.14□□□□□ -1.27
CNGA1-203ENST00000420489 SCAF11Q99590 1463 aaKnown RBP7.14□□□□□ -1.27
CNGA1-203ENST00000420489 DIP2AQ14689 1571 aa7.13□□□□□ -1.27
CNGA1-203ENST00000420489 RGL2O15211 777 aa7.13□□□□□ -1.27
CNGA1-203ENST00000420489 NLRP1Q9C000 1473 aa7.13□□□□□ -1.27
CNGA1-203ENST00000420489 POTEMA6NI47 508 aa7.13□□□□□ -1.27
CNGA1-203ENST00000420489 POTEGQ6S5H5 508 aa7.12□□□□□ -1.27
CNGA1-203ENST00000420489 HS6ST3Q8IZP7 471 aa7.11□□□□□ -1.27
CNGA1-203ENST00000420489 ZNF784Q8NCA9 323 aaPredicted RBP7.11□□□□□ -1.27
CNGA1-203ENST00000420489 PHF8Q9UPP1 1060 aa7.11□□□□□ -1.27
CNGA1-203ENST00000420489 MROH1Q8NDA8 1641 aa7.1□□□□□ -1.27
CNGA1-203ENST00000420489 CHD4Q14839 1912 aa7.1□□□□□ -1.27
CNGA1-203ENST00000420489 DOK7Q18PE1 504 aa7.1□□□□□ -1.27
CNGA1-203ENST00000420489 DPY19L2Q6NUT2 758 aa7.1□□□□□ -1.27
CNGA1-203ENST00000420489 DISP2A7MBM2 1401 aa7.1□□□□□ -1.27
CNGA1-203ENST00000420489 NKTRP30414 1462 aaKnown RBP7.1□□□□□ -1.27
CNGA1-203ENST00000420489 CEBPAP49715 358 aaPredicted RBP7.1□□□□□ -1.27
CNGA1-203ENST00000420489 MICALL2Q8IY33 904 aa7.1□□□□□ -1.27
CNGA1-203ENST00000420489 TRIM52Q96A61 297 aa7.1□□□□□ -1.27
CNGA1-203ENST00000420489 RIMBP2O15034 1052 aa7.09□□□□□ -1.27
CNGA1-203ENST00000420489 HRCP23327 699 aa7.09□□□□□ -1.27
CNGA1-203ENST00000420489 FAM9AQ8IZU1 332 aaPredicted RBP7.09□□□□□ -1.27
CNGA1-203ENST00000420489 FBXO22Q8NEZ5 403 aa7.09□□□□□ -1.27
CNGA1-203ENST00000420489 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.09□□□□□ -1.28
CNGA1-203ENST00000420489 ESF1Q9H501 851 aaKnown RBP7.08□□□□□ -1.28
CNGA1-203ENST00000420489 ZMYM3Q14202 1370 aa7.08□□□□□ -1.28
CNGA1-203ENST00000420489 ABCA6Q8N139 1617 aa7.07□□□□□ -1.28
CNGA1-203ENST00000420489 IGF1RP08069 1367 aa7.07□□□□□ -1.28
CNGA1-203ENST00000420489 ANKLE2Q86XL3 938 aa7.07□□□□□ -1.28
CNGA1-203ENST00000420489 MS4A4AQ96JQ5 239 aa7.07□□□□□ -1.28
CNGA1-203ENST00000420489 ZSWIM6Q9HCJ5 1215 aa7.07□□□□□ -1.28
CNGA1-203ENST00000420489 TIAM1Q13009 1591 aa7.07□□□□□ -1.28
CNGA1-203ENST00000420489 ST18O60284 1047 aa7.07□□□□□ -1.28
CNGA1-203ENST00000420489 MAP3K1Q13233 1512 aa7.06□□□□□ -1.28
CNGA1-203ENST00000420489 PLCH2O75038 1416 aa7.06□□□□□ -1.28
CNGA1-203ENST00000420489 MFRPQ9BY79 579 aa7.06□□□□□ -1.28
CNGA1-203ENST00000420489 ATRNO75882 1429 aa7.05□□□□□ -1.28
CNGA1-203ENST00000420489 RGPD1P0DJD0 1748 aa7.05□□□□□ -1.28
CNGA1-203ENST00000420489 PARD3Q8TEW0 1356 aa7.05□□□□□ -1.28
CNGA1-203ENST00000420489 CAMSAP2Q08AD1 1489 aa7.05□□□□□ -1.28
CNGA1-203ENST00000420489 KDM5AP29375 1690 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms