RNA–Protein interactions for RNA: ENST00000420434.7

SP140-205, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 3,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-205ENST00000420434 NCOA1Q15788 1441 aa10.04□□□□□ -0.8
SP140-205ENST00000420434 STAG3Q9UJ98 1225 aa10.03□□□□□ -0.8
SP140-205ENST00000420434 MBD5Q9P267 1494 aa10.02□□□□□ -0.81
SP140-205ENST00000420434 VGFO15240 615 aaPredicted RBP10.02□□□□□ -0.81
SP140-205ENST00000420434 DENND4BO75064 1496 aaPredicted RBP10.01□□□□□ -0.81
SP140-205ENST00000420434 BRPF3Q9ULD4 1205 aa10.01□□□□□ -0.81
SP140-205ENST00000420434 SAMD9LQ8IVG5 1584 aa10.01□□□□□ -0.81
SP140-205ENST00000420434 CCDC141Q6ZP82 1450 aa10.01□□□□□ -0.81
SP140-205ENST00000420434 GRIPAP1Q4V328 841 aa10.01□□□□□ -0.81
SP140-205ENST00000420434 CDC42BPAQ5VT25 1732 aa10.01□□□□□ -0.81
SP140-205ENST00000420434 CLSTN1O94985 981 aa10□□□□□ -0.81
SP140-205ENST00000420434 CDC42BPBQ9Y5S2 1711 aa10□□□□□ -0.81
SP140-205ENST00000420434 CFAP65Q6ZU64 1925 aaKnown RBP10□□□□□ -0.81
SP140-205ENST00000420434 HSP90AA2PQ14568 343 aaPredicted RBP9.99□□□□□ -0.81
SP140-205ENST00000420434 NOP58Q9Y2X3 529 aaKnown RBP9.99□□□□□ -0.81
SP140-205ENST00000420434 DCAF11Q8TEB1 546 aa9.99□□□□□ -0.81
SP140-205ENST00000420434 WASHC2AQ641Q2 1341 aa9.99□□□□□ -0.81
SP140-205ENST00000420434 KCNG1Q9UIX4 513 aa9.98□□□□□ -0.81
SP140-205ENST00000420434 TONSLQ96HA7 1378 aa9.98□□□□□ -0.81
SP140-205ENST00000420434 PPP4R2Q9NY27 417 aa9.98□□□□□ -0.81
SP140-205ENST00000420434 HFM1A2PYH4 1435 aa9.97□□□□□ -0.81
SP140-205ENST00000420434 FAM43AQ8N2R8 423 aa9.97□□□□□ -0.81
SP140-205ENST00000420434 L3MBTL2Q969R5 705 aa9.96□□□□□ -0.82
SP140-205ENST00000420434 MYO5CQ9NQX4 1742 aa9.96□□□□□ -0.82
SP140-205ENST00000420434 TCOF1Q13428 1488 aaKnown RBP9.94□□□□□ -0.82
SP140-205ENST00000420434 KIAA1107Q9UPP5 1409 aa9.93□□□□□ -0.82
SP140-205ENST00000420434 ZNF518AQ6AHZ1 1483 aa9.93□□□□□ -0.82
SP140-205ENST00000420434 POGZQ7Z3K3 1410 aa9.93□□□□□ -0.82
SP140-205ENST00000420434 PAK3O75914 559 aaPredicted RBP9.93□□□□□ -0.82
SP140-205ENST00000420434 SAFB2Q14151 953 aaKnown RBP eCLIP9.93□□□□□ -0.82
SP140-205ENST00000420434 TEX14Q8IWB6 1497 aa9.93□□□□□ -0.82
SP140-205ENST00000420434 PREX2Q70Z35 1606 aa9.93□□□□□ -0.82
SP140-205ENST00000420434 DHX29Q7Z478 1369 aaKnown RBP9.92□□□□□ -0.82
SP140-205ENST00000420434 ZNF592Q92610 1267 aa9.92□□□□□ -0.82
SP140-205ENST00000420434 PRDM10Q9NQV6 1147 aa9.92□□□□□ -0.82
SP140-205ENST00000420434 ABCA9Q8IUA7 1624 aa9.92□□□□□ -0.82
SP140-205ENST00000420434 PPM1GO15355 546 aaPredicted RBP9.92□□□□□ -0.82
SP140-205ENST00000420434 WWC1Q8IX03 1113 aa9.92□□□□□ -0.82
SP140-205ENST00000420434 ITSN2Q9NZM3 1697 aa9.91□□□□□ -0.82
SP140-205ENST00000420434 KANK1Q14678 1352 aa9.91□□□□□ -0.82
SP140-205ENST00000420434 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.91□□□□□ -0.82
SP140-205ENST00000420434 NBR1Q14596 966 aa9.91□□□□□ -0.82
SP140-205ENST00000420434 TMED8Q6PL24 325 aaPredicted RBP9.91□□□□□ -0.82
SP140-205ENST00000420434 ABCC1P33527 1531 aa9.91□□□□□ -0.82
SP140-205ENST00000420434 RBM33Q96EV2 1170 aaKnown RBP9.9□□□□□ -0.82
SP140-205ENST00000420434 A2MP01023 1474 aa9.9□□□□□ -0.82
SP140-205ENST00000420434 IDI1Q13907 227 aa9.9□□□□□ -0.82
SP140-205ENST00000420434 CFAP44Q96MT7 982 aa9.9□□□□□ -0.82
SP140-205ENST00000420434 STK26Q9P289 416 aa9.9□□□□□ -0.82
SP140-205ENST00000420434 MCCP23508 829 aa9.89□□□□□ -0.83
SP140-205ENST00000420434 HSPA2P54652 639 aa9.89□□□□□ -0.83
SP140-205ENST00000420434 DNMT1P26358 1616 aaKnown RBP9.89□□□□□ -0.83
SP140-205ENST00000420434 MMP14P50281 582 aa9.89□□□□□ -0.83
SP140-205ENST00000420434 HNRNPUQ00839 825 aaKnown RBP eCLIP9.89□□□□□ -0.83
SP140-205ENST00000420434 RTL5Q5HYW3 569 aaPredicted RBP9.89□□□□□ -0.83
SP140-205ENST00000420434 RGS22Q8NE09 1264 aa9.89□□□□□ -0.83
SP140-205ENST00000420434 BCORL1Q5H9F3 1711 aa9.89□□□□□ -0.83
SP140-205ENST00000420434 IPO9Q96P70 1041 aaKnown RBP9.89□□□□□ -0.83
SP140-205ENST00000420434 ROCK1Q13464 1354 aa9.89□□□□□ -0.83
SP140-205ENST00000420434 ATP7AQ04656 1500 aa9.88□□□□□ -0.83
SP140-205ENST00000420434 TMEM132EQ6IEE7 984 aa9.88□□□□□ -0.83
SP140-205ENST00000420434 NEO1Q92859 1461 aa9.88□□□□□ -0.83
SP140-205ENST00000420434 PLCD4Q9BRC7 762 aa9.87□□□□□ -0.83
SP140-205ENST00000420434 PTMAP06454 111 aaKnown RBP9.87□□□□□ -0.83
SP140-205ENST00000420434 RGS3P49796 1198 aa9.86□□□□□ -0.83
SP140-205ENST00000420434 NBPF1Q3BBV0 1214 aa9.86□□□□□ -0.83
SP140-205ENST00000420434 NBPF8Q3BBV2 869 aa9.86□□□□□ -0.83
SP140-205ENST00000420434 NUTM2FA1L443 756 aa9.85□□□□□ -0.83
SP140-205ENST00000420434 ZNF830Q96NB3 372 aaPredicted RBP9.85□□□□□ -0.83
SP140-205ENST00000420434 NEFMP07197 916 aa9.85□□□□□ -0.83
SP140-205ENST00000420434 SLC26A8Q96RN1 970 aa9.85□□□□□ -0.83
SP140-205ENST00000420434 USP35Q9P2H5 1018 aa9.85□□□□□ -0.83
SP140-205ENST00000420434 IFNLR1Q8IU57 520 aaPredicted RBP9.84□□□□□ -0.83
SP140-205ENST00000420434 CLGNO14967 610 aa9.83□□□□□ -0.84
SP140-205ENST00000420434 CCDC144AA2RUR9 1427 aa9.83□□□□□ -0.84
SP140-205ENST00000420434 HSP90AA1P07900 732 aaKnown RBP9.83□□□□□ -0.84
SP140-205ENST00000420434 B4GALNT3Q6L9W6 998 aa9.83□□□□□ -0.84
SP140-205ENST00000420434 TMEM51Q9NW97 253 aa9.83□□□□□ -0.84
SP140-205ENST00000420434 ZFYVE16Q7Z3T8 1539 aa9.83□□□□□ -0.84
SP140-205ENST00000420434 ATP10AO60312 1499 aa9.83□□□□□ -0.84
SP140-205ENST00000420434 ZMYM3Q14202 1370 aa9.83□□□□□ -0.84
SP140-205ENST00000420434 CFAP70Q5T0N1 1121 aa9.83□□□□□ -0.84
SP140-205ENST00000420434 ANP32AP39687 249 aaKnown RBP9.82□□□□□ -0.84
SP140-205ENST00000420434 PSMD1Q99460 953 aa9.82□□□□□ -0.84
SP140-205ENST00000420434 PZPP20742 1482 aa9.82□□□□□ -0.84
SP140-205ENST00000420434 ANKRD30BQ9BXX2 1392 aa9.82□□□□□ -0.84
SP140-205ENST00000420434 FAM193AP78312 1265 aa9.81□□□□□ -0.84
SP140-205ENST00000420434 FAM43BQ6ZT52 329 aaPredicted RBP9.81□□□□□ -0.84
SP140-205ENST00000420434 CARD11Q9BXL7 1154 aa9.81□□□□□ -0.84
SP140-205ENST00000420434 ZBTB47Q9UFB7 747 aaPredicted RBP9.81□□□□□ -0.84
SP140-205ENST00000420434 TRAK1Q9UPV9 953 aa9.81□□□□□ -0.84
SP140-205ENST00000420434 UGGT1Q9NYU2 1555 aa9.81□□□□□ -0.84
SP140-205ENST00000420434 PREX1Q8TCU6 1659 aa9.81□□□□□ -0.84
SP140-205ENST00000420434 ARAP3Q8WWN8 1544 aa9.81□□□□□ -0.84
SP140-205ENST00000420434 EIF4G2P78344 907 aaKnown RBP eCLIP9.81□□□□□ -0.84
SP140-205ENST00000420434 SETQ01105 290 aaPredicted RBP9.81□□□□□ -0.84
SP140-205ENST00000420434 RTEL1-TNFRSF6BF6WH68 1400 aa9.81□□□□□ -0.84
SP140-205ENST00000420434 ZBED9Q6R2W3 1325 aa9.8□□□□□ -0.84
SP140-205ENST00000420434 MLH3Q9UHC1 1453 aa9.8□□□□□ -0.84
SP140-205ENST00000420434 KIDINS220Q9ULH0 1771 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms