RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 MYO5BQ9ULV0 1848 aa32.05■■■□□ 2.72
CPNE1-211ENST00000420363 TRPM2O94759 1503 aa32.04■■■□□ 2.72
CPNE1-211ENST00000420363 ACIN1Q9UKV3 1341 aaKnown RBP32.02■■■□□ 2.72
CPNE1-211ENST00000420363 STRCP1A6NGW2 1772 aa32.02■■■□□ 2.72
CPNE1-211ENST00000420363 SETD5Q9C0A6 1442 aa32■■■□□ 2.71
CPNE1-211ENST00000420363 TRIM52Q96A61 297 aa31.99■■■□□ 2.71
CPNE1-211ENST00000420363 ZFYVE9O95405 1425 aa31.99■■■□□ 2.71
CPNE1-211ENST00000420363 SENP3Q9H4L4 574 aaPredicted RBP31.98■■■□□ 2.71
CPNE1-211ENST00000420363 ALKQ9UM73 1620 aa31.97■■■□□ 2.71
CPNE1-211ENST00000420363 CLTCL1P53675 1640 aa31.94■■■□□ 2.7
CPNE1-211ENST00000420363 SLC4A1APQ9BWU0 796 aaKnown RBP31.93■■■□□ 2.7
CPNE1-211ENST00000420363 RIMS2Q9UQ26 1411 aa31.91■■■□□ 2.7
CPNE1-211ENST00000420363 MED1Q15648 1581 aaPredicted RBP31.9■■■□□ 2.7
CPNE1-211ENST00000420363 SLC26A8Q96RN1 970 aa31.88■■■□□ 2.69
CPNE1-211ENST00000420363 KIF1BO60333 1816 aa31.87■■■□□ 2.69
CPNE1-211ENST00000420363 RAB3GAP2Q9H2M9 1393 aa31.87■■■□□ 2.69
CPNE1-211ENST00000420363 BCANQ96GW7 911 aa31.87■■■□□ 2.69
CPNE1-211ENST00000420363 PHF23Q9BUL5 403 aaPredicted RBP31.87■■■□□ 2.69
CPNE1-211ENST00000420363 PLEKHG1Q9ULL1 1385 aa31.85■■■□□ 2.69
CPNE1-211ENST00000420363 KCNA6P17658 529 aa31.85■■■□□ 2.69
CPNE1-211ENST00000420363 HDGFP51858 240 aaKnown RBP31.85■■■□□ 2.69
CPNE1-211ENST00000420363 CHGAP10645 457 aaKnown RBP31.83■■■□□ 2.69
CPNE1-211ENST00000420363 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.83■■■□□ 2.69
CPNE1-211ENST00000420363 PROSER2Q86WR7 435 aaPredicted RBP31.82■■■□□ 2.68
CPNE1-211ENST00000420363 TMEM94Q12767 1356 aa31.8■■■□□ 2.68
CPNE1-211ENST00000420363 DIP2AQ14689 1571 aa31.79■■■□□ 2.68
CPNE1-211ENST00000420363 MPHOSPH9Q99550 1183 aa31.79■■■□□ 2.68
CPNE1-211ENST00000420363 PPP1R15AO75807 674 aaPredicted RBP31.76■■■□□ 2.67
CPNE1-211ENST00000420363 NWD1Q149M9 1564 aa31.76■■■□□ 2.67
CPNE1-211ENST00000420363 NEXMIFQ5QGS0 1516 aa31.75■■■□□ 2.67
CPNE1-211ENST00000420363 HRCP23327 699 aa31.75■■■□□ 2.67
CPNE1-211ENST00000420363 RBM33Q96EV2 1170 aaKnown RBP31.75■■■□□ 2.67
CPNE1-211ENST00000420363 XIRP1Q702N8 1843 aaKnown RBP31.73■■■□□ 2.67
CPNE1-211ENST00000420363 CCDC144AA2RUR9 1427 aa31.72■■■□□ 2.67
CPNE1-211ENST00000420363 FAM135BQ49AJ0 1406 aa31.71■■■□□ 2.67
CPNE1-211ENST00000420363 SETBP1Q9Y6X0 1596 aa31.71■■■□□ 2.67
CPNE1-211ENST00000420363 NKTRP30414 1462 aaKnown RBP31.69■■■□□ 2.66
CPNE1-211ENST00000420363 ADAMTS13Q76LX8 1427 aa31.68■■■□□ 2.66
CPNE1-211ENST00000420363 NRXN3Q9Y4C0 1643 aa31.67■■■□□ 2.66
CPNE1-211ENST00000420363 FOXD1Q16676 465 aa31.67■■■□□ 2.66
CPNE1-211ENST00000420363 CHD2O14647 1828 aaKnown RBP31.66■■■□□ 2.66
CPNE1-211ENST00000420363 ZNF326Q5BKZ1 582 aaKnown RBP31.66■■■□□ 2.66
CPNE1-211ENST00000420363 PPLO60437 1756 aa31.64■■■□□ 2.66
CPNE1-211ENST00000420363 TBX22Q9Y458 520 aa31.63■■■□□ 2.65
CPNE1-211ENST00000420363 PIK3R4Q99570 1358 aa31.63■■■□□ 2.65
CPNE1-211ENST00000420363 MSH6P52701 1360 aa31.62■■■□□ 2.65
CPNE1-211ENST00000420363 SPATA31E1Q6ZUB1 1445 aa31.61■■■□□ 2.65
CPNE1-211ENST00000420363 RPGRIP1LQ68CZ1 1315 aa31.61■■■□□ 2.65
CPNE1-211ENST00000420363 NUTM2DQ5VT03 806 aaPredicted RBP31.61■■■□□ 2.65
CPNE1-211ENST00000420363 SLAIN2Q9P270 581 aa31.58■■■□□ 2.65
CPNE1-211ENST00000420363 IFT172Q9UG01 1749 aa31.58■■■□□ 2.65
CPNE1-211ENST00000420363 ROBO1Q9Y6N7 1651 aa31.53■■■□□ 2.64
CPNE1-211ENST00000420363 VGFO15240 615 aaPredicted RBP31.52■■■□□ 2.64
CPNE1-211ENST00000420363 C14orf37Q86TY3 774 aa31.52■■■□□ 2.64
CPNE1-211ENST00000420363 RGS17Q9UGC6 210 aaPredicted RBP31.52■■■□□ 2.64
CPNE1-211ENST00000420363 SETD1AO15047 1707 aaKnown RBP31.52■■■□□ 2.64
CPNE1-211ENST00000420363 XRN1Q8IZH2 1706 aaKnown RBP31.52■■■□□ 2.64
CPNE1-211ENST00000420363 ANKRD30BQ9BXX2 1392 aa31.51■■■□□ 2.63
CPNE1-211ENST00000420363 NCOA3Q9Y6Q9 1424 aa31.49■■■□□ 2.63
CPNE1-211ENST00000420363 PTPRUQ92729 1446 aa31.45■■■□□ 2.63
CPNE1-211ENST00000420363 C19orf44Q9H6X5 657 aa31.42■■■□□ 2.62
CPNE1-211ENST00000420363 ATF3P18847 181 aa31.41■■■□□ 2.62
CPNE1-211ENST00000420363 CADPS2Q86UW7 1296 aa31.41■■■□□ 2.62
CPNE1-211ENST00000420363 AMOTL2Q9Y2J4 779 aa31.41■■■□□ 2.62
CPNE1-211ENST00000420363 METP08581 1390 aa31.41■■■□□ 2.62
CPNE1-211ENST00000420363 MYOM2P54296 1465 aa31.4■■■□□ 2.62
CPNE1-211ENST00000420363 PRAG1Q86YV5 1406 aa31.4■■■□□ 2.62
CPNE1-211ENST00000420363 RGL3Q3MIN7 710 aa31.38■■■□□ 2.61
CPNE1-211ENST00000420363 JCADQ9P266 1359 aa31.37■■■□□ 2.61
CPNE1-211ENST00000420363 PIK3C2GO75747 1445 aa31.37■■■□□ 2.61
CPNE1-211ENST00000420363 NRXN1Q9ULB1 1477 aa31.36■■■□□ 2.61
CPNE1-211ENST00000420363 POTEAQ6S8J7 498 aa31.36■■■□□ 2.61
CPNE1-211ENST00000420363 PHLPP1O60346 1717 aa31.35■■■□□ 2.61
CPNE1-211ENST00000420363 PTCH1Q13635 1447 aa31.33■■■□□ 2.61
CPNE1-211ENST00000420363 ADGRF5Q8IZF2 1346 aa31.33■■■□□ 2.61
CPNE1-211ENST00000420363 LAMC1P11047 1609 aa31.33■■■□□ 2.61
CPNE1-211ENST00000420363 TRIM26Q12899 539 aaPredicted RBP31.3■■■□□ 2.6
CPNE1-211ENST00000420363 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.28■■■□□ 2.6
CPNE1-211ENST00000420363 DCCP43146 1447 aa31.27■■■□□ 2.6
CPNE1-211ENST00000420363 ASXL1Q8IXJ9 1541 aa31.25■■■□□ 2.59
CPNE1-211ENST00000420363 KNDC1Q76NI1 1749 aa31.25■■■□□ 2.59
CPNE1-211ENST00000420363 SPATA31A6Q5VVP1 1343 aa31.23■■■□□ 2.59
CPNE1-211ENST00000420363 NALCNQ8IZF0 1738 aa31.22■■■□□ 2.59
CPNE1-211ENST00000420363 COL16A1Q07092 1604 aaPredicted RBP31.22■■■□□ 2.59
CPNE1-211ENST00000420363 TECPR2O15040 1411 aa31.22■■■□□ 2.59
CPNE1-211ENST00000420363 MEX3CQ5U5Q3 659 aaKnown RBP31.21■■■□□ 2.59
CPNE1-211ENST00000420363 BRINP3Q76B58 766 aa31.21■■■□□ 2.59
CPNE1-211ENST00000420363 STAC3Q96MF2 364 aa31.21■■■□□ 2.59
CPNE1-211ENST00000420363 ADGRL3Q9HAR2 1447 aa31.21■■■□□ 2.59
CPNE1-211ENST00000420363 ROBO2Q9HCK4 1378 aa31.18■■■□□ 2.58
CPNE1-211ENST00000420363 LRPPRCP42704 1394 aaKnown RBP31.17■■■□□ 2.58
CPNE1-211ENST00000420363 AHDC1Q5TGY3 1603 aaPredicted RBP31.16■■■□□ 2.58
CPNE1-211ENST00000420363 DHX57Q6P158 1386 aaKnown RBP31.16■■■□□ 2.58
CPNE1-211ENST00000420363 C14orf93Q9H972 538 aaKnown RBP31.15■■■□□ 2.58
CPNE1-211ENST00000420363 ABCC11Q96J66 1382 aa31.13■■■□□ 2.57
CPNE1-211ENST00000420363 YTHDC2Q9H6S0 1430 aaKnown RBP31.12■■■□□ 2.57
CPNE1-211ENST00000420363 ZNF772Q68DY9 489 aaPredicted RBP31.11■■■□□ 2.57
CPNE1-211ENST00000420363 LRP6O75581 1613 aa31.09■■■□□ 2.57
CPNE1-211ENST00000420363 ADGRB1O14514 1584 aa31.09■■■□□ 2.57
CPNE1-211ENST00000420363 NUTM2BA6NNL0 878 aaPredicted RBP31.09■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms