RNA–Protein interactions for RNA: ENST00000418988.2

PSMA1-202, Transcript of proteasome subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PSMA1, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-202ENST00000418988 ADGRB3O60242 1522 aa21.19■□□□□ 0.98
PSMA1-202ENST00000418988 RBM33Q96EV2 1170 aaKnown RBP21.17■□□□□ 0.98
PSMA1-202ENST00000418988 TMEM2Q9UHN6 1383 aa21.16■□□□□ 0.98
PSMA1-202ENST00000418988 IDI1Q13907 227 aa21.14■□□□□ 0.97
PSMA1-202ENST00000418988 SLC26A8Q96RN1 970 aa21.14■□□□□ 0.97
PSMA1-202ENST00000418988 NUP155O75694 1391 aa21.12■□□□□ 0.97
PSMA1-202ENST00000418988 TMEM94Q12767 1356 aa21.12■□□□□ 0.97
PSMA1-202ENST00000418988 SPHKAPQ2M3C7 1700 aa21.12■□□□□ 0.97
PSMA1-202ENST00000418988 PROSER2Q86WR7 435 aaPredicted RBP21.11■□□□□ 0.97
PSMA1-202ENST00000418988 KCNA6P17658 529 aa21.1■□□□□ 0.97
PSMA1-202ENST00000418988 FAM135BQ49AJ0 1406 aa21.1■□□□□ 0.97
PSMA1-202ENST00000418988 SLC52A1Q9NWF4 448 aa21.09■□□□□ 0.97
PSMA1-202ENST00000418988 ROBO1Q9Y6N7 1651 aa21.09■□□□□ 0.97
PSMA1-202ENST00000418988 BCANQ96GW7 911 aa21.08■□□□□ 0.97
PSMA1-202ENST00000418988 POTEAQ6S8J7 498 aa21.07■□□□□ 0.96
PSMA1-202ENST00000418988 TMEM131LA2VDJ0 1609 aa21.07■□□□□ 0.96
PSMA1-202ENST00000418988 TRPM2O94759 1503 aa21.05■□□□□ 0.96
PSMA1-202ENST00000418988 MYO5BQ9ULV0 1848 aa21.04■□□□□ 0.96
PSMA1-202ENST00000418988 ACIN1Q9UKV3 1341 aaKnown RBP21.02■□□□□ 0.95
PSMA1-202ENST00000418988 ZFYVE9O95405 1425 aa20.99■□□□□ 0.95
PSMA1-202ENST00000418988 PHLPP1O60346 1717 aa20.98■□□□□ 0.95
PSMA1-202ENST00000418988 NWD1Q149M9 1564 aa20.98■□□□□ 0.95
PSMA1-202ENST00000418988 MSH6P52701 1360 aa20.97■□□□□ 0.95
PSMA1-202ENST00000418988 NKTRP30414 1462 aaKnown RBP20.97■□□□□ 0.95
PSMA1-202ENST00000418988 SLAIN2Q9P270 581 aa20.97■□□□□ 0.95
PSMA1-202ENST00000418988 CHD2O14647 1828 aaKnown RBP20.96■□□□□ 0.95
PSMA1-202ENST00000418988 CLTCL1P53675 1640 aa20.96■□□□□ 0.95
PSMA1-202ENST00000418988 PPP1R15AO75807 674 aaPredicted RBP20.94■□□□□ 0.94
PSMA1-202ENST00000418988 SETD1AO15047 1707 aaKnown RBP20.94■□□□□ 0.94
PSMA1-202ENST00000418988 RIMS2Q9UQ26 1411 aa20.93■□□□□ 0.94
PSMA1-202ENST00000418988 DIP2AQ14689 1571 aa20.93■□□□□ 0.94
PSMA1-202ENST00000418988 CHGAP10645 457 aaKnown RBP20.92■□□□□ 0.94
PSMA1-202ENST00000418988 NUTM2DQ5VT03 806 aaPredicted RBP20.92■□□□□ 0.94
PSMA1-202ENST00000418988 SETD5Q9C0A6 1442 aa20.92■□□□□ 0.94
PSMA1-202ENST00000418988 KIF1BO60333 1816 aa20.91■□□□□ 0.94
PSMA1-202ENST00000418988 PLEKHG1Q9ULL1 1385 aa20.91■□□□□ 0.94
PSMA1-202ENST00000418988 JCADQ9P266 1359 aa20.89■□□□□ 0.93
PSMA1-202ENST00000418988 C14orf37Q86TY3 774 aa20.89■□□□□ 0.93
PSMA1-202ENST00000418988 HDGFP51858 240 aaKnown RBP20.87■□□□□ 0.93
PSMA1-202ENST00000418988 TRIM52Q96A61 297 aa20.87■□□□□ 0.93
PSMA1-202ENST00000418988 SLC4A1APQ9BWU0 796 aaKnown RBP20.86■□□□□ 0.93
PSMA1-202ENST00000418988 COL16A1Q07092 1604 aaPredicted RBP20.86■□□□□ 0.93
PSMA1-202ENST00000418988 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.85■□□□□ 0.93
PSMA1-202ENST00000418988 TBX22Q9Y458 520 aa20.85■□□□□ 0.93
PSMA1-202ENST00000418988 RAB3GAP2Q9H2M9 1393 aa20.85■□□□□ 0.93
PSMA1-202ENST00000418988 NEXMIFQ5QGS0 1516 aa20.84■□□□□ 0.93
PSMA1-202ENST00000418988 SETBP1Q9Y6X0 1596 aa20.84■□□□□ 0.93
PSMA1-202ENST00000418988 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.84■□□□□ 0.93
PSMA1-202ENST00000418988 MEX3CQ5U5Q3 659 aaKnown RBP20.82■□□□□ 0.92
PSMA1-202ENST00000418988 LRP6O75581 1613 aa20.82■□□□□ 0.92
PSMA1-202ENST00000418988 ADAMTS13Q76LX8 1427 aa20.81■□□□□ 0.92
PSMA1-202ENST00000418988 NRXN3Q9Y4C0 1643 aa20.81■□□□□ 0.92
PSMA1-202ENST00000418988 CCDC144AA2RUR9 1427 aa20.79■□□□□ 0.92
PSMA1-202ENST00000418988 ATF3P18847 181 aa20.79■□□□□ 0.92
PSMA1-202ENST00000418988 CADPS2Q86UW7 1296 aa20.78■□□□□ 0.92
PSMA1-202ENST00000418988 C19orf44Q9H6X5 657 aa20.78■□□□□ 0.92
PSMA1-202ENST00000418988 NCOA3Q9Y6Q9 1424 aa20.78■□□□□ 0.92
PSMA1-202ENST00000418988 PIK3R4Q99570 1358 aa20.77■□□□□ 0.92
PSMA1-202ENST00000418988 PPLO60437 1756 aa20.77■□□□□ 0.91
PSMA1-202ENST00000418988 SPATA31A6Q5VVP1 1343 aa20.77■□□□□ 0.91
PSMA1-202ENST00000418988 HRCP23327 699 aa20.76■□□□□ 0.91
PSMA1-202ENST00000418988 MPHOSPH9Q99550 1183 aa20.76■□□□□ 0.91
PSMA1-202ENST00000418988 AMOTL2Q9Y2J4 779 aa20.76■□□□□ 0.91
PSMA1-202ENST00000418988 IFT172Q9UG01 1749 aa20.75■□□□□ 0.91
PSMA1-202ENST00000418988 NUTM2BA6NNL0 878 aaPredicted RBP20.75■□□□□ 0.91
PSMA1-202ENST00000418988 NUTM2EB1AL46 878 aaPredicted RBP20.75■□□□□ 0.91
PSMA1-202ENST00000418988 NUTM2AQ8IVF1 878 aaPredicted RBP20.75■□□□□ 0.91
PSMA1-202ENST00000418988 AHDC1Q5TGY3 1603 aaPredicted RBP20.75■□□□□ 0.91
PSMA1-202ENST00000418988 SHPRHQ149N8 1683 aa20.74■□□□□ 0.91
PSMA1-202ENST00000418988 PTPRUQ92729 1446 aa20.74■□□□□ 0.91
PSMA1-202ENST00000418988 ZNF772Q68DY9 489 aaPredicted RBP20.73■□□□□ 0.91
PSMA1-202ENST00000418988 XRN1Q8IZH2 1706 aaKnown RBP20.73■□□□□ 0.91
PSMA1-202ENST00000418988 BRINP3Q76B58 766 aa20.72■□□□□ 0.91
PSMA1-202ENST00000418988 SPATA31E1Q6ZUB1 1445 aa20.71■□□□□ 0.91
PSMA1-202ENST00000418988 UPF1Q92900 1129 aaKnown RBP eCLIP20.71■□□□□ 0.91
PSMA1-202ENST00000418988 RPGRIP1LQ68CZ1 1315 aa20.7■□□□□ 0.9
PSMA1-202ENST00000418988 ZNF326Q5BKZ1 582 aaKnown RBP20.69■□□□□ 0.9
PSMA1-202ENST00000418988 RXRBP28702 533 aa20.67■□□□□ 0.9
PSMA1-202ENST00000418988 PRAG1Q86YV5 1406 aa20.66■□□□□ 0.9
PSMA1-202ENST00000418988 FOXD1Q16676 465 aa20.65■□□□□ 0.9
PSMA1-202ENST00000418988 ASXL1Q8IXJ9 1541 aa20.64■□□□□ 0.9
PSMA1-202ENST00000418988 ANKRD30BQ9BXX2 1392 aa20.64■□□□□ 0.89
PSMA1-202ENST00000418988 AFF2P51816 1311 aa20.64■□□□□ 0.89
PSMA1-202ENST00000418988 DDX17Q92841 729 aaKnown RBP20.64■□□□□ 0.89
PSMA1-202ENST00000418988 VGFO15240 615 aaPredicted RBP20.63■□□□□ 0.89
PSMA1-202ENST00000418988 LAMC1P11047 1609 aa20.63■□□□□ 0.89
PSMA1-202ENST00000418988 MYOM2P54296 1465 aa20.62■□□□□ 0.89
PSMA1-202ENST00000418988 MST1RQ04912 1400 aa20.62■□□□□ 0.89
PSMA1-202ENST00000418988 METP08581 1390 aa20.62■□□□□ 0.89
PSMA1-202ENST00000418988 NHSL1Q5SYE7 1610 aa20.61■□□□□ 0.89
PSMA1-202ENST00000418988 DCCP43146 1447 aa20.61■□□□□ 0.89
PSMA1-202ENST00000418988 PTCH1Q13635 1447 aa20.6■□□□□ 0.89
PSMA1-202ENST00000418988 C8orf37Q96NL8 207 aa20.59■□□□□ 0.89
PSMA1-202ENST00000418988 NRXN1Q9ULB1 1477 aa20.58■□□□□ 0.89
PSMA1-202ENST00000418988 LRRC59Q96AG4 307 aaKnown RBP20.58■□□□□ 0.89
PSMA1-202ENST00000418988 PIK3C2GO75747 1445 aa20.58■□□□□ 0.88
PSMA1-202ENST00000418988 NALCNQ8IZF0 1738 aa20.56■□□□□ 0.88
PSMA1-202ENST00000418988 KNDC1Q76NI1 1749 aa20.56■□□□□ 0.88
PSMA1-202ENST00000418988 QTRT2Q9H974 415 aaKnown RBP20.55■□□□□ 0.88
PSMA1-202ENST00000418988 ADGRL3Q9HAR2 1447 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms