RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 SETD1AO15047 1707 aaKnown RBP15.54■□□□□ 0.08
HDLBP-206ENST00000417540 RIMS2Q9UQ26 1411 aa15.53■□□□□ 0.08
HDLBP-206ENST00000417540 IFT172Q9UG01 1749 aa15.53■□□□□ 0.08
HDLBP-206ENST00000417540 PPLO60437 1756 aa15.52■□□□□ 0.08
HDLBP-206ENST00000417540 THEMISQ8N1K5 641 aaPredicted RBP15.52■□□□□ 0.08
HDLBP-206ENST00000417540 LRRC7Q96NW7 1537 aa15.52■□□□□ 0.07
HDLBP-206ENST00000417540 ANKLE2Q86XL3 938 aa15.51■□□□□ 0.07
HDLBP-206ENST00000417540 CHD2O14647 1828 aaKnown RBP15.5■□□□□ 0.07
HDLBP-206ENST00000417540 XRN1Q8IZH2 1706 aaKnown RBP15.48■□□□□ 0.07
HDLBP-206ENST00000417540 DIP2AQ14689 1571 aa15.48■□□□□ 0.07
HDLBP-206ENST00000417540 NUTM2DQ5VT03 806 aaPredicted RBP15.47■□□□□ 0.07
HDLBP-206ENST00000417540 ADAMTS13Q76LX8 1427 aa15.47■□□□□ 0.07
HDLBP-206ENST00000417540 STAG3Q9UJ98 1225 aa15.47■□□□□ 0.07
HDLBP-206ENST00000417540 SETBP1Q9Y6X0 1596 aa15.47■□□□□ 0.07
HDLBP-206ENST00000417540 FOXD1Q16676 465 aa15.46■□□□□ 0.07
HDLBP-206ENST00000417540 TXNDC2Q86VQ3 553 aa15.46■□□□□ 0.07
HDLBP-206ENST00000417540 RAB3GAP2Q9H2M9 1393 aa15.46■□□□□ 0.07
HDLBP-206ENST00000417540 CHGAP10645 457 aaKnown RBP15.45■□□□□ 0.06
HDLBP-206ENST00000417540 PLEKHG1Q9ULL1 1385 aa15.45■□□□□ 0.06
HDLBP-206ENST00000417540 SLC52A1Q9NWF4 448 aa15.44■□□□□ 0.06
HDLBP-206ENST00000417540 TRIM52Q96A61 297 aa15.43■□□□□ 0.06
HDLBP-206ENST00000417540 NKTRP30414 1462 aaKnown RBP15.43■□□□□ 0.06
HDLBP-206ENST00000417540 SETD5Q9C0A6 1442 aa15.43■□□□□ 0.06
HDLBP-206ENST00000417540 NALCNQ8IZF0 1738 aa15.42■□□□□ 0.06
HDLBP-206ENST00000417540 UBAP1LF5GYI3 381 aa15.41■□□□□ 0.06
HDLBP-206ENST00000417540 SLC26A8Q96RN1 970 aa15.41■□□□□ 0.06
HDLBP-206ENST00000417540 ASXL1Q8IXJ9 1541 aa15.41■□□□□ 0.06
HDLBP-206ENST00000417540 PTPRUQ92729 1446 aa15.41■□□□□ 0.06
HDLBP-206ENST00000417540 EID1Q9Y6B2 187 aa15.39■□□□□ 0.05
HDLBP-206ENST00000417540 RBM33Q96EV2 1170 aaKnown RBP15.38■□□□□ 0.05
HDLBP-206ENST00000417540 SLC4A1APQ9BWU0 796 aaKnown RBP15.38■□□□□ 0.05
HDLBP-206ENST00000417540 ROBO1Q9Y6N7 1651 aa15.37■□□□□ 0.05
HDLBP-206ENST00000417540 SPATA31E1Q6ZUB1 1445 aa15.36■□□□□ 0.05
HDLBP-206ENST00000417540 PPP1R15AO75807 674 aaPredicted RBP15.36■□□□□ 0.05
HDLBP-206ENST00000417540 TMEM94Q12767 1356 aa15.36■□□□□ 0.05
HDLBP-206ENST00000417540 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.35■□□□□ 0.05
HDLBP-206ENST00000417540 CCDC144AA2RUR9 1427 aa15.34■□□□□ 0.05
HDLBP-206ENST00000417540 KNDC1Q76NI1 1749 aa15.32■□□□□ 0.04
HDLBP-206ENST00000417540 HSPA1LP34931 641 aa15.32■□□□□ 0.04
HDLBP-206ENST00000417540 METP08581 1390 aa15.32■□□□□ 0.04
HDLBP-206ENST00000417540 ZNF326Q5BKZ1 582 aaKnown RBP15.31■□□□□ 0.04
HDLBP-206ENST00000417540 BCANQ96GW7 911 aa15.31■□□□□ 0.04
HDLBP-206ENST00000417540 MPHOSPH9Q99550 1183 aa15.31■□□□□ 0.04
HDLBP-206ENST00000417540 SCAF1Q9H7N4 1312 aaKnown RBP15.31■□□□□ 0.04
HDLBP-206ENST00000417540 PIP4K2BP78356 416 aa15.3■□□□□ 0.04
HDLBP-206ENST00000417540 MED1Q15648 1581 aaPredicted RBP15.3■□□□□ 0.04
HDLBP-206ENST00000417540 KCNA6P17658 529 aa15.28■□□□□ 0.04
HDLBP-206ENST00000417540 PIK3C2GO75747 1445 aa15.26■□□□□ 0.03
HDLBP-206ENST00000417540 PHLPP1O60346 1717 aa15.26■□□□□ 0.03
HDLBP-206ENST00000417540 LAMC1P11047 1609 aa15.26■□□□□ 0.03
HDLBP-206ENST00000417540 MYOM2P54296 1465 aa15.26■□□□□ 0.03
HDLBP-206ENST00000417540 COL16A1Q07092 1604 aaPredicted RBP15.25■□□□□ 0.03
HDLBP-206ENST00000417540 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.25■□□□□ 0.03
HDLBP-206ENST00000417540 NRXN1Q9ULB1 1477 aa15.24■□□□□ 0.03
HDLBP-206ENST00000417540 PTCH1Q13635 1447 aa15.24■□□□□ 0.03
HDLBP-206ENST00000417540 ADGRF5Q8IZF2 1346 aa15.23■□□□□ 0.03
HDLBP-206ENST00000417540 NHSL1Q5SYE7 1610 aa15.23■□□□□ 0.03
HDLBP-206ENST00000417540 PIK3R4Q99570 1358 aa15.23■□□□□ 0.03
HDLBP-206ENST00000417540 ANKRD30BQ9BXX2 1392 aa15.23■□□□□ 0.03
HDLBP-206ENST00000417540 PRAG1Q86YV5 1406 aa15.22■□□□□ 0.03
HDLBP-206ENST00000417540 ROBO2Q9HCK4 1378 aa15.22■□□□□ 0.03
HDLBP-206ENST00000417540 PROSER2Q86WR7 435 aaPredicted RBP15.21■□□□□ 0.03
HDLBP-206ENST00000417540 TBX22Q9Y458 520 aa15.21■□□□□ 0.03
HDLBP-206ENST00000417540 MSH6P52701 1360 aa15.21■□□□□ 0.02
HDLBP-206ENST00000417540 ADGRL3Q9HAR2 1447 aa15.2■□□□□ 0.02
HDLBP-206ENST00000417540 AHDC1Q5TGY3 1603 aaPredicted RBP15.19■□□□□ 0.02
HDLBP-206ENST00000417540 RGL3Q3MIN7 710 aa15.19■□□□□ 0.02
HDLBP-206ENST00000417540 ADGRB1O14514 1584 aa15.19■□□□□ 0.02
HDLBP-206ENST00000417540 CDC42BPGQ6DT37 1551 aa15.19■□□□□ 0.02
HDLBP-206ENST00000417540 ARHGEF28Q8N1W1 1705 aaKnown RBP15.18■□□□□ 0.02
HDLBP-206ENST00000417540 TOM1O60784 492 aa15.18■□□□□ 0.02
HDLBP-206ENST00000417540 AMOTL2Q9Y2J4 779 aa15.18■□□□□ 0.02
HDLBP-206ENST00000417540 MST1RQ04912 1400 aa15.17■□□□□ 0.02
HDLBP-206ENST00000417540 FMN2Q9NZ56 1722 aa15.17■□□□□ 0.02
HDLBP-206ENST00000417540 PLEKHH1Q9ULM0 1364 aa15.15■□□□□ 0.02
HDLBP-206ENST00000417540 TECPR2O15040 1411 aa15.15■□□□□ 0.02
HDLBP-206ENST00000417540 DCCP43146 1447 aa15.15■□□□□ 0.02
HDLBP-206ENST00000417540 SHPRHQ149N8 1683 aa15.14■□□□□ 0.01
HDLBP-206ENST00000417540 HDGFP51858 240 aaKnown RBP15.14■□□□□ 0.01
HDLBP-206ENST00000417540 RGPD8O14715 1765 aaPredicted RBP15.13■□□□□ 0.01
HDLBP-206ENST00000417540 DHX57Q6P158 1386 aaKnown RBP15.13■□□□□ 0.01
HDLBP-206ENST00000417540 FAM135BQ49AJ0 1406 aa15.13■□□□□ 0.01
HDLBP-206ENST00000417540 RPGRIP1LQ68CZ1 1315 aa15.13■□□□□ 0.01
HDLBP-206ENST00000417540 NCOA3Q9Y6Q9 1424 aa15.12■□□□□ 0.01
HDLBP-206ENST00000417540 YTHDC2Q9H6S0 1430 aaKnown RBP15.11■□□□□ 0.01
HDLBP-206ENST00000417540 LRP6O75581 1613 aa15.11■□□□□ 0.01
HDLBP-206ENST00000417540 USP32Q8NFA0 1604 aa15.11■□□□□ 0.01
HDLBP-206ENST00000417540 C14orf37Q86TY3 774 aa15.11■□□□□ 0.01
HDLBP-206ENST00000417540 PHF23Q9BUL5 403 aaPredicted RBP15.1■□□□□ 0.01
HDLBP-206ENST00000417540 RGS17Q9UGC6 210 aaPredicted RBP15.1■□□□□ 0.01
HDLBP-206ENST00000417540 ADGRB2O60241 1585 aa15.1■□□□□ 0.01
HDLBP-206ENST00000417540 LRPPRCP42704 1394 aaKnown RBP15.1■□□□□ 0.01
HDLBP-206ENST00000417540 VGFO15240 615 aaPredicted RBP15.09■□□□□ 0.01
HDLBP-206ENST00000417540 KIAA1210Q9ULL0 1709 aa15.09■□□□□ 0.01
HDLBP-206ENST00000417540 TMEM132EQ6IEE7 984 aa15.08■□□□□ 0
HDLBP-206ENST00000417540 C1orf167Q5SNV9 1468 aa15.08■□□□□ 0
HDLBP-206ENST00000417540 DLC1Q96QB1 1528 aa15.07■□□□□ 0
HDLBP-206ENST00000417540 TRPM1Q7Z4N2 1603 aa15.07■□□□□ 0
HDLBP-206ENST00000417540 CFAP70Q5T0N1 1121 aa15.06■□□□□ 0
HDLBP-206ENST00000417540 STK26Q9P289 416 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms