RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 BCANQ96GW7 911 aa21.72■■□□□ 1.07
SSB-204ENST00000417292 LRP6O75581 1613 aa21.72■■□□□ 1.07
SSB-204ENST00000417292 CHD2O14647 1828 aaKnown RBP21.69■■□□□ 1.06
SSB-204ENST00000417292 UPF1Q92900 1129 aaKnown RBP eCLIP21.69■■□□□ 1.06
SSB-204ENST00000417292 SLC52A1Q9NWF4 448 aa21.69■■□□□ 1.06
SSB-204ENST00000417292 ZFYVE9O95405 1425 aa21.69■■□□□ 1.06
SSB-204ENST00000417292 CHIC2Q9UKJ5 165 aa21.68■■□□□ 1.06
SSB-204ENST00000417292 SRCAPQ6ZRS2 3230 aa21.67■■□□□ 1.06
SSB-204ENST00000417292 PLEKHG1Q9ULL1 1385 aa21.67■■□□□ 1.06
SSB-204ENST00000417292 ANKRD30AQ9BXX3 1397 aa21.66■■□□□ 1.06
SSB-204ENST00000417292 SPATA31A6Q5VVP1 1343 aa21.66■■□□□ 1.06
SSB-204ENST00000417292 FGD6Q6ZV73 1430 aa21.64■■□□□ 1.06
SSB-204ENST00000417292 LOC105371045A0A1W2PR82 267 aa21.64■■□□□ 1.05
SSB-204ENST00000417292 TRIM52Q96A61 297 aa21.64■■□□□ 1.05
SSB-204ENST00000417292 MYO5BQ9ULV0 1848 aa21.64■■□□□ 1.05
SSB-204ENST00000417292 ZNF772Q68DY9 489 aaPredicted RBP21.63■■□□□ 1.05
SSB-204ENST00000417292 RIMS2Q9UQ26 1411 aa21.63■■□□□ 1.05
SSB-204ENST00000417292 MEX3CQ5U5Q3 659 aaKnown RBP21.62■■□□□ 1.05
SSB-204ENST00000417292 NCOA3Q9Y6Q9 1424 aa21.62■■□□□ 1.05
SSB-204ENST00000417292 PPP1R15AO75807 674 aaPredicted RBP21.61■■□□□ 1.05
SSB-204ENST00000417292 TBX22Q9Y458 520 aa21.61■■□□□ 1.05
SSB-204ENST00000417292 AHDC1Q5TGY3 1603 aaPredicted RBP21.61■■□□□ 1.05
SSB-204ENST00000417292 RPRD2Q5VT52 1461 aaKnown RBP21.6■■□□□ 1.05
SSB-204ENST00000417292 TMEM131LA2VDJ0 1609 aa21.6■■□□□ 1.05
SSB-204ENST00000417292 SHPRHQ149N8 1683 aa21.6■■□□□ 1.05
SSB-204ENST00000417292 GCC2Q8IWJ2 1684 aa21.6■■□□□ 1.05
SSB-204ENST00000417292 C14orf37Q86TY3 774 aa21.59■■□□□ 1.05
SSB-204ENST00000417292 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.59■■□□□ 1.05
SSB-204ENST00000417292 ADAMTS13Q76LX8 1427 aa21.57■■□□□ 1.04
SSB-204ENST00000417292 CADPS2Q86UW7 1296 aa21.57■■□□□ 1.04
SSB-204ENST00000417292 HDGFP51858 240 aaKnown RBP21.56■■□□□ 1.04
SSB-204ENST00000417292 C19orf44Q9H6X5 657 aa21.56■■□□□ 1.04
SSB-204ENST00000417292 RXRBP28702 533 aa21.55■■□□□ 1.04
SSB-204ENST00000417292 ADGRL2O95490 1459 aa21.55■■□□□ 1.04
SSB-204ENST00000417292 DIP2AQ14689 1571 aa21.54■■□□□ 1.04
SSB-204ENST00000417292 ATF3P18847 181 aa21.54■■□□□ 1.04
SSB-204ENST00000417292 NUTM2DQ5VT03 806 aaPredicted RBP21.54■■□□□ 1.04
SSB-204ENST00000417292 BRINP3Q76B58 766 aa21.52■■□□□ 1.04
SSB-204ENST00000417292 ANKRD50Q9ULJ7 1429 aa21.52■■□□□ 1.04
SSB-204ENST00000417292 NUTM2BA6NNL0 878 aaPredicted RBP21.51■■□□□ 1.03
SSB-204ENST00000417292 NUTM2EB1AL46 878 aaPredicted RBP21.51■■□□□ 1.03
SSB-204ENST00000417292 NUTM2AQ8IVF1 878 aaPredicted RBP21.51■■□□□ 1.03
SSB-204ENST00000417292 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.51■■□□□ 1.03
SSB-204ENST00000417292 CDK12Q9NYV4 1490 aaPredicted RBP21.51■■□□□ 1.03
SSB-204ENST00000417292 PIK3R4Q99570 1358 aa21.5■■□□□ 1.03
SSB-204ENST00000417292 CHGAP10645 457 aaKnown RBP21.5■■□□□ 1.03
SSB-204ENST00000417292 PTPRUQ92729 1446 aa21.48■■□□□ 1.03
SSB-204ENST00000417292 APLP2Q06481 763 aa21.48■■□□□ 1.03
SSB-204ENST00000417292 AFF2P51816 1311 aa21.48■■□□□ 1.03
SSB-204ENST00000417292 AMOTL2Q9Y2J4 779 aa21.47■■□□□ 1.03
SSB-204ENST00000417292 ASXL1Q8IXJ9 1541 aa21.45■■□□□ 1.02
SSB-204ENST00000417292 SETD5Q9C0A6 1442 aa21.45■■□□□ 1.02
SSB-204ENST00000417292 TRPM2O94759 1503 aa21.45■■□□□ 1.02
SSB-204ENST00000417292 E9PCH4 1651 aa21.44■■□□□ 1.02
SSB-204ENST00000417292 DCCP43146 1447 aa21.43■■□□□ 1.02
SSB-204ENST00000417292 UNC13BO14795 1591 aa21.42■■□□□ 1.02
SSB-204ENST00000417292 RGS12O14924 1447 aa21.42■■□□□ 1.02
SSB-204ENST00000417292 MST1RQ04912 1400 aa21.41■■□□□ 1.02
SSB-204ENST00000417292 FAM50AQ14320 339 aaKnown RBP21.41■■□□□ 1.02
SSB-204ENST00000417292 NHSL1Q5SYE7 1610 aa21.4■■□□□ 1.02
SSB-204ENST00000417292 XRN1Q8IZH2 1706 aaKnown RBP21.38■■□□□ 1.01
SSB-204ENST00000417292 DDX17Q92841 729 aaKnown RBP21.38■■□□□ 1.01
SSB-204ENST00000417292 LRRC59Q96AG4 307 aaKnown RBP21.38■■□□□ 1.01
SSB-204ENST00000417292 C8orf37Q96NL8 207 aa21.38■■□□□ 1.01
SSB-204ENST00000417292 QTRT2Q9H974 415 aaKnown RBP21.38■■□□□ 1.01
SSB-204ENST00000417292 NRXN3Q9Y4C0 1643 aa21.37■■□□□ 1.01
SSB-204ENST00000417292 RBM6P78332 1123 aaKnown RBP21.37■■□□□ 1.01
SSB-204ENST00000417292 PNPLA6Q8IY17 1366 aa21.36■■□□□ 1.01
SSB-204ENST00000417292 EP400Q96L91 3159 aa21.35■■□□□ 1.01
SSB-204ENST00000417292 IQGAP3Q86VI3 1631 aa21.34■■□□□ 1.01
SSB-204ENST00000417292 SETBP1Q9Y6X0 1596 aa21.33■■□□□ 1.01
SSB-204ENST00000417292 METP08581 1390 aa21.33■■□□□ 1
SSB-204ENST00000417292 ADGRL3Q9HAR2 1447 aa21.29■■□□□ 1
SSB-204ENST00000417292 ADAMTS2O95450 1211 aa21.29■■□□□ 1
SSB-204ENST00000417292 NGLY1Q96IV0 654 aa21.28■■□□□ 1
SSB-204ENST00000417292 NALCNQ8IZF0 1738 aa21.28■■□□□ 1
SSB-204ENST00000417292 NUP155O75694 1391 aa21.27■■□□□ 1
SSB-204ENST00000417292 ROCK1Q13464 1354 aa21.25■□□□□ 0.99
SSB-204ENST00000417292 ATAD2Q6PL18 1390 aa21.25■□□□□ 0.99
SSB-204ENST00000417292 C1orf167Q5SNV9 1468 aa21.24■□□□□ 0.99
SSB-204ENST00000417292 ZNF326Q5BKZ1 582 aaKnown RBP21.23■□□□□ 0.99
SSB-204ENST00000417292 LAMC1P11047 1609 aa21.22■□□□□ 0.99
SSB-204ENST00000417292 USP21Q9UK80 565 aa21.22■□□□□ 0.99
SSB-204ENST00000417292 SOS2Q07890 1332 aaPredicted RBP21.21■□□□□ 0.99
SSB-204ENST00000417292 SPHKAPQ2M3C7 1700 aa21.21■□□□□ 0.99
SSB-204ENST00000417292 ORAI2Q96SN7 254 aa21.2■□□□□ 0.98
SSB-204ENST00000417292 FNBP4Q8N3X1 1017 aaPredicted RBP21.19■□□□□ 0.98
SSB-204ENST00000417292 TRPC5Q9UL62 973 aaPredicted RBP21.19■□□□□ 0.98
SSB-204ENST00000417292 NEXMIFQ5QGS0 1516 aa21.19■□□□□ 0.98
SSB-204ENST00000417292 ZRANB1Q9UGI0 708 aa21.17■□□□□ 0.98
SSB-204ENST00000417292 ATRNO75882 1429 aa21.17■□□□□ 0.98
SSB-204ENST00000417292 PTCH1Q13635 1447 aa21.16■□□□□ 0.98
SSB-204ENST00000417292 ROBO2Q9HCK4 1378 aa21.14■□□□□ 0.98
SSB-204ENST00000417292 CLTCL1P53675 1640 aa21.13■□□□□ 0.97
SSB-204ENST00000417292 COL22A1Q8NFW1 1626 aaPredicted RBP21.13■□□□□ 0.97
SSB-204ENST00000417292 ITGAEP38570 1179 aa21.11■□□□□ 0.97
SSB-204ENST00000417292 BCL9LQ86UU0 1499 aa21.11■□□□□ 0.97
SSB-204ENST00000417292 MYOM2P54296 1465 aa21.1■□□□□ 0.97
SSB-204ENST00000417292 FOXD1Q16676 465 aa21.1■□□□□ 0.97
SSB-204ENST00000417292 CCDC125Q86Z20 511 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms