RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 FAM135BQ49AJ0 1406 aa23.99■■□□□ 1.43
SBDSP1-201ENST00000415772 MSH6P52701 1360 aa23.97■■□□□ 1.43
SBDSP1-201ENST00000415772 RBM33Q96EV2 1170 aaKnown RBP23.97■■□□□ 1.43
SBDSP1-201ENST00000415772 TET3O43151 1660 aa23.96■■□□□ 1.43
SBDSP1-201ENST00000415772 NKTRP30414 1462 aaKnown RBP23.96■■□□□ 1.43
SBDSP1-201ENST00000415772 GCC2Q8IWJ2 1684 aa23.93■■□□□ 1.42
SBDSP1-201ENST00000415772 ROBO1Q9Y6N7 1651 aa23.93■■□□□ 1.42
SBDSP1-201ENST00000415772 C14orf37Q86TY3 774 aa23.92■■□□□ 1.42
SBDSP1-201ENST00000415772 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.92■■□□□ 1.42
SBDSP1-201ENST00000415772 RIMS2Q9UQ26 1411 aa23.92■■□□□ 1.42
SBDSP1-201ENST00000415772 PLEKHG1Q9ULL1 1385 aa23.91■■□□□ 1.42
SBDSP1-201ENST00000415772 NWD1Q149M9 1564 aa23.91■■□□□ 1.42
SBDSP1-201ENST00000415772 UNC13BO14795 1591 aa23.87■■□□□ 1.41
SBDSP1-201ENST00000415772 MYO5BQ9ULV0 1848 aa23.87■■□□□ 1.41
SBDSP1-201ENST00000415772 ZFYVE9O95405 1425 aa23.86■■□□□ 1.41
SBDSP1-201ENST00000415772 ITGAEP38570 1179 aa23.86■■□□□ 1.41
SBDSP1-201ENST00000415772 SLAIN2Q9P270 581 aa23.86■■□□□ 1.41
SBDSP1-201ENST00000415772 TMEM131LA2VDJ0 1609 aa23.85■■□□□ 1.41
SBDSP1-201ENST00000415772 NUTM2DQ5VT03 806 aaPredicted RBP23.83■■□□□ 1.41
SBDSP1-201ENST00000415772 TBX22Q9Y458 520 aa23.83■■□□□ 1.41
SBDSP1-201ENST00000415772 CHD2O14647 1828 aaKnown RBP23.82■■□□□ 1.4
SBDSP1-201ENST00000415772 PHLPP1O60346 1717 aa23.82■■□□□ 1.4
SBDSP1-201ENST00000415772 RGS17Q9UGC6 210 aaPredicted RBP23.82■■□□□ 1.4
SBDSP1-201ENST00000415772 ROCK1Q13464 1354 aa23.81■■□□□ 1.4
SBDSP1-201ENST00000415772 E9PCH4 1651 aa23.81■■□□□ 1.4
SBDSP1-201ENST00000415772 NUP155O75694 1391 aa23.8■■□□□ 1.4
SBDSP1-201ENST00000415772 IQGAP3Q86VI3 1631 aa23.79■■□□□ 1.4
SBDSP1-201ENST00000415772 JCADQ9P266 1359 aa23.78■■□□□ 1.4
SBDSP1-201ENST00000415772 ATF3P18847 181 aa23.78■■□□□ 1.4
SBDSP1-201ENST00000415772 DIP2AQ14689 1571 aa23.78■■□□□ 1.4
SBDSP1-201ENST00000415772 NCOA3Q9Y6Q9 1424 aa23.76■■□□□ 1.39
SBDSP1-201ENST00000415772 POTEAQ6S8J7 498 aa23.75■■□□□ 1.39
SBDSP1-201ENST00000415772 CADPS2Q86UW7 1296 aa23.75■■□□□ 1.39
SBDSP1-201ENST00000415772 PIK3R4Q99570 1358 aa23.75■■□□□ 1.39
SBDSP1-201ENST00000415772 MEX3CQ5U5Q3 659 aaKnown RBP23.74■■□□□ 1.39
SBDSP1-201ENST00000415772 TRPM2O94759 1503 aa23.74■■□□□ 1.39
SBDSP1-201ENST00000415772 ZNF326Q5BKZ1 582 aaKnown RBP23.73■■□□□ 1.39
SBDSP1-201ENST00000415772 C19orf44Q9H6X5 657 aa23.73■■□□□ 1.39
SBDSP1-201ENST00000415772 ADAMTS13Q76LX8 1427 aa23.71■■□□□ 1.39
SBDSP1-201ENST00000415772 PPARGC1BQ86YN6 1023 aaKnown RBP23.7■■□□□ 1.38
SBDSP1-201ENST00000415772 AMOTL2Q9Y2J4 779 aa23.7■■□□□ 1.38
SBDSP1-201ENST00000415772 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.68■■□□□ 1.38
SBDSP1-201ENST00000415772 SPATA31A6Q5VVP1 1343 aa23.67■■□□□ 1.38
SBDSP1-201ENST00000415772 COL16A1Q07092 1604 aaPredicted RBP23.66■■□□□ 1.38
SBDSP1-201ENST00000415772 SPHKAPQ2M3C7 1700 aa23.64■■□□□ 1.38
SBDSP1-201ENST00000415772 ZNF772Q68DY9 489 aaPredicted RBP23.61■■□□□ 1.37
SBDSP1-201ENST00000415772 AHDC1Q5TGY3 1603 aaPredicted RBP23.61■■□□□ 1.37
SBDSP1-201ENST00000415772 PTPRUQ92729 1446 aa23.59■■□□□ 1.37
SBDSP1-201ENST00000415772 DCCP43146 1447 aa23.59■■□□□ 1.37
SBDSP1-201ENST00000415772 NUTM2BA6NNL0 878 aaPredicted RBP23.58■■□□□ 1.37
SBDSP1-201ENST00000415772 NUTM2EB1AL46 878 aaPredicted RBP23.58■■□□□ 1.37
SBDSP1-201ENST00000415772 BRINP3Q76B58 766 aa23.58■■□□□ 1.37
SBDSP1-201ENST00000415772 NUTM2AQ8IVF1 878 aaPredicted RBP23.58■■□□□ 1.37
SBDSP1-201ENST00000415772 SHPRHQ149N8 1683 aa23.57■■□□□ 1.36
SBDSP1-201ENST00000415772 SETBP1Q9Y6X0 1596 aa23.57■■□□□ 1.36
SBDSP1-201ENST00000415772 SETD1AO15047 1707 aaKnown RBP23.56■■□□□ 1.36
SBDSP1-201ENST00000415772 LRP6O75581 1613 aa23.55■■□□□ 1.36
SBDSP1-201ENST00000415772 XRN1Q8IZH2 1706 aaKnown RBP23.54■■□□□ 1.36
SBDSP1-201ENST00000415772 TRIM52Q96A61 297 aa23.54■■□□□ 1.36
SBDSP1-201ENST00000415772 NRXN3Q9Y4C0 1643 aa23.53■■□□□ 1.36
SBDSP1-201ENST00000415772 ASXL1Q8IXJ9 1541 aa23.52■■□□□ 1.36
SBDSP1-201ENST00000415772 CLTCL1P53675 1640 aa23.51■■□□□ 1.35
SBDSP1-201ENST00000415772 METP08581 1390 aa23.51■■□□□ 1.35
SBDSP1-201ENST00000415772 KIF1BO60333 1816 aa23.5■■□□□ 1.35
SBDSP1-201ENST00000415772 LRRC59Q96AG4 307 aaKnown RBP23.5■■□□□ 1.35
SBDSP1-201ENST00000415772 MST1RQ04912 1400 aa23.49■■□□□ 1.35
SBDSP1-201ENST00000415772 RXRBP28702 533 aa23.48■■□□□ 1.35
SBDSP1-201ENST00000415772 ADGRL3Q9HAR2 1447 aa23.48■■□□□ 1.35
SBDSP1-201ENST00000415772 NEXMIFQ5QGS0 1516 aa23.48■■□□□ 1.35
SBDSP1-201ENST00000415772 VGFO15240 615 aaPredicted RBP23.46■■□□□ 1.35
SBDSP1-201ENST00000415772 SETD5Q9C0A6 1442 aa23.45■■□□□ 1.34
SBDSP1-201ENST00000415772 NHSL1Q5SYE7 1610 aa23.44■■□□□ 1.34
SBDSP1-201ENST00000415772 NAIPQ13075 1403 aa23.43■■□□□ 1.34
SBDSP1-201ENST00000415772 RRBP1Q9P2E9 1410 aaKnown RBP23.43■■□□□ 1.34
SBDSP1-201ENST00000415772 AFF2P51816 1311 aa23.43■■□□□ 1.34
SBDSP1-201ENST00000415772 NALCNQ8IZF0 1738 aa23.42■■□□□ 1.34
SBDSP1-201ENST00000415772 C8orf37Q96NL8 207 aa23.42■■□□□ 1.34
SBDSP1-201ENST00000415772 SLC4A1APQ9BWU0 796 aaKnown RBP23.41■■□□□ 1.34
SBDSP1-201ENST00000415772 DDX17Q92841 729 aaKnown RBP23.4■■□□□ 1.34
SBDSP1-201ENST00000415772 UPF1Q92900 1129 aaKnown RBP eCLIP23.38■■□□□ 1.33
SBDSP1-201ENST00000415772 RPGRIP1LQ68CZ1 1315 aa23.37■■□□□ 1.33
SBDSP1-201ENST00000415772 PTCH1Q13635 1447 aa23.36■■□□□ 1.33
SBDSP1-201ENST00000415772 PNPLA6Q8IY17 1366 aa23.36■■□□□ 1.33
SBDSP1-201ENST00000415772 C1orf167Q5SNV9 1468 aa23.36■■□□□ 1.33
SBDSP1-201ENST00000415772 NGLY1Q96IV0 654 aa23.35■■□□□ 1.33
SBDSP1-201ENST00000415772 CDK12Q9NYV4 1490 aaPredicted RBP23.35■■□□□ 1.33
SBDSP1-201ENST00000415772 ADAMTS2O95450 1211 aa23.34■■□□□ 1.33
SBDSP1-201ENST00000415772 QTRT2Q9H974 415 aaKnown RBP23.34■■□□□ 1.33
SBDSP1-201ENST00000415772 HFM1A2PYH4 1435 aa23.33■■□□□ 1.33
SBDSP1-201ENST00000415772 ROBO2Q9HCK4 1378 aa23.31■■□□□ 1.32
SBDSP1-201ENST00000415772 RBM6P78332 1123 aaKnown RBP23.31■■□□□ 1.32
SBDSP1-201ENST00000415772 ORAI2Q96SN7 254 aa23.3■■□□□ 1.32
SBDSP1-201ENST00000415772 PPLO60437 1756 aa23.27■■□□□ 1.32
SBDSP1-201ENST00000415772 CCDC144AA2RUR9 1427 aa23.25■■□□□ 1.31
SBDSP1-201ENST00000415772 RGL3Q3MIN7 710 aa23.25■■□□□ 1.31
SBDSP1-201ENST00000415772 ESCO1Q5FWF5 840 aa23.25■■□□□ 1.31
SBDSP1-201ENST00000415772 USP21Q9UK80 565 aa23.25■■□□□ 1.31
SBDSP1-201ENST00000415772 SOS2Q07890 1332 aaPredicted RBP23.25■■□□□ 1.31
SBDSP1-201ENST00000415772 FOXD1Q16676 465 aa23.24■■□□□ 1.31
SBDSP1-201ENST00000415772 NPHP3Q7Z494 1330 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms