RNA–Protein interactions for RNA: ENST00000415068.1

ZNF3-206, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-206ENST00000415068 USP47Q96K76 1375 aa18.74■□□□□ 0.59
ZNF3-206ENST00000415068 ZNF326Q5BKZ1 582 aaKnown RBP18.74■□□□□ 0.59
ZNF3-206ENST00000415068 PPLO60437 1756 aa18.73■□□□□ 0.59
ZNF3-206ENST00000415068 ADGRF5Q8IZF2 1346 aa18.73■□□□□ 0.59
ZNF3-206ENST00000415068 HDGFP51858 240 aaKnown RBP18.72■□□□□ 0.59
ZNF3-206ENST00000415068 TNRQ92752 1358 aa18.71■□□□□ 0.59
ZNF3-206ENST00000415068 NLRP1Q9C000 1473 aa18.71■□□□□ 0.59
ZNF3-206ENST00000415068 NEXMIFQ5QGS0 1516 aa18.7■□□□□ 0.58
ZNF3-206ENST00000415068 PIK3C2GO75747 1445 aa18.7■□□□□ 0.58
ZNF3-206ENST00000415068 CHGAP10645 457 aaKnown RBP18.7■□□□□ 0.58
ZNF3-206ENST00000415068 A2ML1A8K2U0 1454 aa18.7■□□□□ 0.58
ZNF3-206ENST00000415068 SETBP1Q9Y6X0 1596 aa18.69■□□□□ 0.58
ZNF3-206ENST00000415068 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.69■□□□□ 0.58
ZNF3-206ENST00000415068 ST20-MTHFSA0A0A6YYL1 179 aa18.67■□□□□ 0.58
ZNF3-206ENST00000415068 WASHC2AQ641Q2 1341 aa18.67■□□□□ 0.58
ZNF3-206ENST00000415068 C11orf95C9JLR9 678 aaPredicted RBP18.66■□□□□ 0.58
ZNF3-206ENST00000415068 CFAP70Q5T0N1 1121 aa18.66■□□□□ 0.58
ZNF3-206ENST00000415068 HIRIP3Q9BW71 556 aaPredicted RBP18.66■□□□□ 0.58
ZNF3-206ENST00000415068 ADAMTSL3P82987 1691 aa18.66■□□□□ 0.58
ZNF3-206ENST00000415068 SCAF11Q99590 1463 aaKnown RBP18.65■□□□□ 0.58
ZNF3-206ENST00000415068 CCDC7Q96M83 1385 aa18.65■□□□□ 0.58
ZNF3-206ENST00000415068 TESK2Q96S53 571 aa18.64■□□□□ 0.57
ZNF3-206ENST00000415068 C3P01024 1663 aa18.63■□□□□ 0.57
ZNF3-206ENST00000415068 FER1L4A9Z1Z3 1794 aa18.63■□□□□ 0.57
ZNF3-206ENST00000415068 STAG3Q9UJ98 1225 aa18.63■□□□□ 0.57
ZNF3-206ENST00000415068 POLR1AO95602 1720 aaPredicted RBP18.63■□□□□ 0.57
ZNF3-206ENST00000415068 DDX10Q13206 875 aaKnown RBP18.62■□□□□ 0.57
ZNF3-206ENST00000415068 SETD1BQ9UPS6 1966 aaKnown RBP18.61■□□□□ 0.57
ZNF3-206ENST00000415068 IQGAP1P46940 1657 aa18.6■□□□□ 0.57
ZNF3-206ENST00000415068 KIF7Q2M1P5 1343 aa18.6■□□□□ 0.57
ZNF3-206ENST00000415068 MYO5BQ9ULV0 1848 aa18.6■□□□□ 0.57
ZNF3-206ENST00000415068 RIMS2Q9UQ26 1411 aa18.59■□□□□ 0.57
ZNF3-206ENST00000415068 TMEM2Q9UHN6 1383 aa18.59■□□□□ 0.57
ZNF3-206ENST00000415068 SBNO2Q9Y2G9 1366 aa18.59■□□□□ 0.57
ZNF3-206ENST00000415068 CEBPAP49715 358 aaPredicted RBP18.59■□□□□ 0.57
ZNF3-206ENST00000415068 THEMISQ8N1K5 641 aaPredicted RBP18.59■□□□□ 0.57
ZNF3-206ENST00000415068 ADGRB1O14514 1584 aa18.59■□□□□ 0.57
ZNF3-206ENST00000415068 EIF3AQ14152 1382 aaKnown RBP18.58■□□□□ 0.57
ZNF3-206ENST00000415068 PUS7Q96PZ0 661 aaKnown RBP18.58■□□□□ 0.56
ZNF3-206ENST00000415068 UBR1Q8IWV7 1749 aa18.57■□□□□ 0.56
ZNF3-206ENST00000415068 CDCA8Q53HL2 280 aa18.56■□□□□ 0.56
ZNF3-206ENST00000415068 SIRT1Q96EB6 747 aa18.56■□□□□ 0.56
ZNF3-206ENST00000415068 ARHGAP23Q9P227 1491 aa18.56■□□□□ 0.56
ZNF3-206ENST00000415068 TMF1P82094 1093 aa18.55■□□□□ 0.56
ZNF3-206ENST00000415068 SLIT1O75093 1534 aa18.54■□□□□ 0.56
ZNF3-206ENST00000415068 MIER1Q8N108 512 aa18.53■□□□□ 0.56
ZNF3-206ENST00000415068 MYO3AQ8NEV4 1616 aa18.52■□□□□ 0.55
ZNF3-206ENST00000415068 ALKQ9UM73 1620 aa18.52■□□□□ 0.55
ZNF3-206ENST00000415068 ABCC11Q96J66 1382 aa18.5■□□□□ 0.55
ZNF3-206ENST00000415068 EID1Q9Y6B2 187 aa18.49■□□□□ 0.55
ZNF3-206ENST00000415068 PLEKHG1Q9ULL1 1385 aa18.49■□□□□ 0.55
ZNF3-206ENST00000415068 TMEM132EQ6IEE7 984 aa18.48■□□□□ 0.55
ZNF3-206ENST00000415068 CENPJQ9HC77 1338 aaPredicted RBP18.48■□□□□ 0.55
ZNF3-206ENST00000415068 RIMS1Q86UR5 1692 aaKnown RBP18.47■□□□□ 0.55
ZNF3-206ENST00000415068 MED14O60244 1454 aa18.47■□□□□ 0.55
ZNF3-206ENST00000415068 LTKP29376 864 aa18.47■□□□□ 0.55
ZNF3-206ENST00000415068 TXNDC2Q86VQ3 553 aa18.47■□□□□ 0.55
ZNF3-206ENST00000415068 TBX22Q9Y458 520 aa18.47■□□□□ 0.55
ZNF3-206ENST00000415068 LRPPRCP42704 1394 aaKnown RBP18.46■□□□□ 0.55
ZNF3-206ENST00000415068 NUTM2DQ5VT03 806 aaPredicted RBP18.46■□□□□ 0.55
ZNF3-206ENST00000415068 CCER2I3L3R5 266 aa18.45■□□□□ 0.54
ZNF3-206ENST00000415068 YTHDC2Q9H6S0 1430 aaKnown RBP18.45■□□□□ 0.54
ZNF3-206ENST00000415068 DLC1Q96QB1 1528 aa18.44■□□□□ 0.54
ZNF3-206ENST00000415068 ANP32CO43423 234 aa18.44■□□□□ 0.54
ZNF3-206ENST00000415068 TRAK1Q9UPV9 953 aa18.44■□□□□ 0.54
ZNF3-206ENST00000415068 PTPRMP28827 1452 aa18.44■□□□□ 0.54
ZNF3-206ENST00000415068 DISP3Q9P2K9 1392 aa18.43■□□□□ 0.54
ZNF3-206ENST00000415068 PER1O15534 1290 aaPredicted RBP18.43■□□□□ 0.54
ZNF3-206ENST00000415068 ASXL1Q8IXJ9 1541 aa18.43■□□□□ 0.54
ZNF3-206ENST00000415068 SETD1AO15047 1707 aaKnown RBP18.43■□□□□ 0.54
ZNF3-206ENST00000415068 NRXN3Q9Y4C0 1643 aa18.42■□□□□ 0.54
ZNF3-206ENST00000415068 CEP170BQ9Y4F5 1589 aaPredicted RBP18.42■□□□□ 0.54
ZNF3-206ENST00000415068 TECPR2O15040 1411 aa18.41■□□□□ 0.54
ZNF3-206ENST00000415068 ADAMTS13Q76LX8 1427 aa18.41■□□□□ 0.54
ZNF3-206ENST00000415068 ZNF142P52746 1687 aaPredicted RBP18.41■□□□□ 0.54
ZNF3-206ENST00000415068 FAM135BQ49AJ0 1406 aa18.4■□□□□ 0.54
ZNF3-206ENST00000415068 KTN1Q86UP2 1357 aaKnown RBP18.4■□□□□ 0.54
ZNF3-206ENST00000415068 ANKLE2Q86XL3 938 aa18.39■□□□□ 0.53
ZNF3-206ENST00000415068 PIK3R4Q99570 1358 aa18.39■□□□□ 0.53
ZNF3-206ENST00000415068 ARHGEF28Q8N1W1 1705 aaKnown RBP18.37■□□□□ 0.53
ZNF3-206ENST00000415068 PRKRIP1Q9H875 184 aaPredicted RBP18.37■□□□□ 0.53
ZNF3-206ENST00000415068 EVC2Q86UK5 1308 aa18.37■□□□□ 0.53
ZNF3-206ENST00000415068 METP08581 1390 aa18.37■□□□□ 0.53
ZNF3-206ENST00000415068 DIP2AQ14689 1571 aa18.36■□□□□ 0.53
ZNF3-206ENST00000415068 NPC1L1Q9UHC9 1359 aa18.33■□□□□ 0.53
ZNF3-206ENST00000415068 PRAM1Q96QH2 718 aa18.33■□□□□ 0.52
ZNF3-206ENST00000415068 KNDC1Q76NI1 1749 aa18.32■□□□□ 0.52
ZNF3-206ENST00000415068 PANK3Q9H999 370 aa18.32■□□□□ 0.52
ZNF3-206ENST00000415068 POGKQ9P215 609 aa18.32■□□□□ 0.52
ZNF3-206ENST00000415068 STK26Q9P289 416 aa18.32■□□□□ 0.52
ZNF3-206ENST00000415068 QRICH2Q9H0J4 1663 aa18.31■□□□□ 0.52
ZNF3-206ENST00000415068 NINLQ9Y2I6 1382 aa18.31■□□□□ 0.52
ZNF3-206ENST00000415068 RALBP1Q15311 655 aa18.31■□□□□ 0.52
ZNF3-206ENST00000415068 KDM4FA0A1W2PPD8 638 aa18.3■□□□□ 0.52
ZNF3-206ENST00000415068 CPS1P31327 1500 aa18.28■□□□□ 0.52
ZNF3-206ENST00000415068 BCANQ96GW7 911 aa18.27■□□□□ 0.52
ZNF3-206ENST00000415068 POLR3GLQ9BT43 218 aa18.27■□□□□ 0.52
ZNF3-206ENST00000415068 PLPPR3Q6T4P5 718 aa18.26■□□□□ 0.51
ZNF3-206ENST00000415068 ATAD2Q6PL18 1390 aa18.26■□□□□ 0.51
ZNF3-206ENST00000415068 TULP4Q9NRJ4 1543 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms