RNA–Protein interactions for RNA: ENST00000412908.6

PSMA3-202, Transcript of proteasome subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene PSMA3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-202ENST00000412908 LRCH3Q96II8 777 aa12.34□□□□□ -0.43
PSMA3-202ENST00000412908 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.34□□□□□ -0.43
PSMA3-202ENST00000412908 RNF40O75150 1001 aa12.33□□□□□ -0.44
PSMA3-202ENST00000412908 SWT1Q5T5J6 900 aaKnown RBP12.33□□□□□ -0.44
PSMA3-202ENST00000412908 THSD4Q6ZMP0 1018 aa12.33□□□□□ -0.44
PSMA3-202ENST00000412908 PHOX2BQ99453 314 aa12.33□□□□□ -0.44
PSMA3-202ENST00000412908 SOWAHBA6NEL2 793 aa12.32□□□□□ -0.44
PSMA3-202ENST00000412908 TPRNQ4KMQ1 711 aa12.32□□□□□ -0.44
PSMA3-202ENST00000412908 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.31□□□□□ -0.44
PSMA3-202ENST00000412908 SLC24A3Q9HC58 644 aa12.31□□□□□ -0.44
PSMA3-202ENST00000412908 TMEM134Q9H6X4 195 aa12.3□□□□□ -0.44
PSMA3-202ENST00000412908 HPS5Q9UPZ3 1129 aa12.28□□□□□ -0.44
PSMA3-202ENST00000412908 AK7Q96M32 723 aa12.27□□□□□ -0.45
PSMA3-202ENST00000412908 CECR2Q9BXF3 1484 aa12.27□□□□□ -0.45
PSMA3-202ENST00000412908 SLC4A3P48751 1232 aa12.26□□□□□ -0.45
PSMA3-202ENST00000412908 HCSTQ9UBK5 93 aa12.26□□□□□ -0.45
PSMA3-202ENST00000412908 MYO15BQ96JP2 1530 aa12.26□□□□□ -0.45
PSMA3-202ENST00000412908 PPP4CP60510 307 aa12.25□□□□□ -0.45
PSMA3-202ENST00000412908 MDM2Q00987 491 aaPredicted RBP12.25□□□□□ -0.45
PSMA3-202ENST00000412908 SLF2Q8IX21 1173 aa12.25□□□□□ -0.45
PSMA3-202ENST00000412908 WBP1LQ9NX94 342 aa12.25□□□□□ -0.45
PSMA3-202ENST00000412908 TSR3Q9UJK0 312 aaKnown RBP12.25□□□□□ -0.45
PSMA3-202ENST00000412908 CC2D2AQ9P2K1 1620 aa12.24□□□□□ -0.45
PSMA3-202ENST00000412908 DAXXQ9UER7 740 aaPredicted RBP12.23□□□□□ -0.45
PSMA3-202ENST00000412908 TRIM66O15016 1216 aa12.22□□□□□ -0.45
PSMA3-202ENST00000412908 PRKCSHP14314 528 aaPredicted RBP12.21□□□□□ -0.45
PSMA3-202ENST00000412908 DDX11L8A8MPP1 907 aa12.2□□□□□ -0.46
PSMA3-202ENST00000412908 SHROOM4Q9ULL8 1493 aa12.2□□□□□ -0.46
PSMA3-202ENST00000412908 TTLL12Q14166 644 aaPredicted RBP12.19□□□□□ -0.46
PSMA3-202ENST00000412908 CLCN1P35523 988 aa12.18□□□□□ -0.46
PSMA3-202ENST00000412908 RDH13Q8NBN7 331 aa12.18□□□□□ -0.46
PSMA3-202ENST00000412908 SLC10A3P09131 477 aa12.17□□□□□ -0.46
PSMA3-202ENST00000412908 GPCPD1Q9NPB8 672 aa12.17□□□□□ -0.46
PSMA3-202ENST00000412908 RSPH4AQ5TD94 716 aa12.16□□□□□ -0.46
PSMA3-202ENST00000412908 REPIN1Q9BWE0 567 aaKnown RBP12.16□□□□□ -0.46
PSMA3-202ENST00000412908 AMHR2Q16671 573 aa12.15□□□□□ -0.46
PSMA3-202ENST00000412908 NECTIN2Q92692 538 aa12.15□□□□□ -0.46
PSMA3-202ENST00000412908 PDE4DQ08499 809 aa12.14□□□□□ -0.47
PSMA3-202ENST00000412908 SULF1Q8IWU6 871 aa12.14□□□□□ -0.47
PSMA3-202ENST00000412908 APLP1P51693 650 aa12.13□□□□□ -0.47
PSMA3-202ENST00000412908 CFHP08603 1231 aa12.12□□□□□ -0.47
PSMA3-202ENST00000412908 NYAP1Q6ZVC0 841 aa12.12□□□□□ -0.47
PSMA3-202ENST00000412908 TMUB1Q9BVT8 246 aa12.12□□□□□ -0.47
PSMA3-202ENST00000412908 EIF4G1Q04637 1599 aaKnown RBP12.11□□□□□ -0.47
PSMA3-202ENST00000412908 GIGYF2Q6Y7W6 1299 aaKnown RBP12.11□□□□□ -0.47
PSMA3-202ENST00000412908 PARP9Q8IXQ6 854 aa12.11□□□□□ -0.47
PSMA3-202ENST00000412908 SSTR3P32745 418 aaPredicted RBP12.1□□□□□ -0.47
PSMA3-202ENST00000412908 FAM217BQ9NTX9 383 aaPredicted RBP12.1□□□□□ -0.47
PSMA3-202ENST00000412908 KMT5BQ4FZB7 885 aa12.09□□□□□ -0.47
PSMA3-202ENST00000412908 CD46P15529 392 aa12.07□□□□□ -0.48
PSMA3-202ENST00000412908 PRR14Q9BWN1 585 aa12.07□□□□□ -0.48
PSMA3-202ENST00000412908 GCGRP47871 477 aa12.06□□□□□ -0.48
PSMA3-202ENST00000412908 ACTN4O43707 911 aaKnown RBP12.04□□□□□ -0.48
PSMA3-202ENST00000412908 PCDHB3Q9Y5E6 796 aa12.04□□□□□ -0.48
PSMA3-202ENST00000412908 COPS2P61201 443 aa12.03□□□□□ -0.48
PSMA3-202ENST00000412908 GPBP1L1Q9HC44 474 aaPredicted RBP12.03□□□□□ -0.48
PSMA3-202ENST00000412908 MS4A1P11836 297 aa12.02□□□□□ -0.49
PSMA3-202ENST00000412908 FUT2Q10981 343 aa12.01□□□□□ -0.49
PSMA3-202ENST00000412908 PUS10Q3MIT2 529 aaKnown RBP12.01□□□□□ -0.49
PSMA3-202ENST00000412908 MTRQ99707 1265 aa12.01□□□□□ -0.49
PSMA3-202ENST00000412908 BEGAINQ9BUH8 593 aa12□□□□□ -0.49
PSMA3-202ENST00000412908 PLA2G2EQ9NZK7 142 aa12□□□□□ -0.49
PSMA3-202ENST00000412908 NEUROD2Q15784 382 aa11.99□□□□□ -0.49
PSMA3-202ENST00000412908 TJAP1Q5JTD0 557 aa11.99□□□□□ -0.49
PSMA3-202ENST00000412908 BLOC1S3Q6QNY0 202 aa11.99□□□□□ -0.49
PSMA3-202ENST00000412908 KDM4AO75164 1064 aa11.98□□□□□ -0.49
PSMA3-202ENST00000412908 NUTM1Q86Y26 1132 aa11.98□□□□□ -0.49
PSMA3-202ENST00000412908 KDM4CQ9H3R0 1056 aa11.98□□□□□ -0.49
PSMA3-202ENST00000412908 ATP6V1AP38606 617 aa11.97□□□□□ -0.49
PSMA3-202ENST00000412908 ZNF516Q92618 1163 aa11.97□□□□□ -0.49
PSMA3-202ENST00000412908 IL21Q9HBE4 155 aa11.97□□□□□ -0.49
PSMA3-202ENST00000412908 KCNC4Q03721 635 aa11.96□□□□□ -0.49
PSMA3-202ENST00000412908 ITGBL1O95965 494 aaPredicted RBP11.94□□□□□ -0.5
PSMA3-202ENST00000412908 SCRIBQ14160 1630 aa11.93□□□□□ -0.5
PSMA3-202ENST00000412908 DCAF1Q9Y4B6 1507 aa11.93□□□□□ -0.5
PSMA3-202ENST00000412908 GRIPAP1Q4V328 841 aa11.93□□□□□ -0.5
PSMA3-202ENST00000412908 NR1I2O75469 434 aa11.92□□□□□ -0.5
PSMA3-202ENST00000412908 BRPF1P55201 1214 aaPredicted RBP11.92□□□□□ -0.5
PSMA3-202ENST00000412908 MORN1Q5T089 497 aa11.92□□□□□ -0.5
PSMA3-202ENST00000412908 SCUBE3Q8IX30 993 aa11.92□□□□□ -0.5
PSMA3-202ENST00000412908 SPIRE2Q8WWL2 714 aa11.92□□□□□ -0.5
PSMA3-202ENST00000412908 HLA-CQ95604 372 aa11.92□□□□□ -0.5
PSMA3-202ENST00000412908 ZPR1O75312 459 aa11.91□□□□□ -0.5
PSMA3-202ENST00000412908 USP46P62068 366 aa11.91□□□□□ -0.5
PSMA3-202ENST00000412908 NKX2-3Q8TAU0 364 aa11.9□□□□□ -0.5
PSMA3-202ENST00000412908 TBC1D2Q9BYX2 928 aa11.9□□□□□ -0.5
PSMA3-202ENST00000412908 FAM117AQ9C073 453 aa11.9□□□□□ -0.5
PSMA3-202ENST00000412908 SLC27A5Q9Y2P5 690 aa11.9□□□□□ -0.5
PSMA3-202ENST00000412908 ZCCHC6Q5VYS8 1495 aaKnown RBP11.89□□□□□ -0.51
PSMA3-202ENST00000412908 HOXA2O43364 376 aa11.89□□□□□ -0.51
PSMA3-202ENST00000412908 GUCA2AQ02747 115 aa11.89□□□□□ -0.51
PSMA3-202ENST00000412908 CUX2O14529 1486 aa11.89□□□□□ -0.51
PSMA3-202ENST00000412908 TLL1O43897 1013 aa11.88□□□□□ -0.51
PSMA3-202ENST00000412908 NDUFV2P19404 249 aa11.88□□□□□ -0.51
PSMA3-202ENST00000412908 MOXD2PA6NHM9 499 aa11.87□□□□□ -0.51
PSMA3-202ENST00000412908 DIXDC1Q155Q3 683 aa11.85□□□□□ -0.51
PSMA3-202ENST00000412908 IL27Q8NEV9 243 aa11.85□□□□□ -0.51
PSMA3-202ENST00000412908 DDRGK1Q96HY6 314 aa11.85□□□□□ -0.51
PSMA3-202ENST00000412908 FDX1P10109 184 aa11.84□□□□□ -0.51
PSMA3-202ENST00000412908 IFFO2Q5TF58 517 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms