RNA–Protein interactions for RNA: ENST00000412870.1

CASKP1-201, Transcript of calcium/calmodulin dependent serine protein kinase pseudogene 1, humanhuman

BASIC

Gene CASKP1, Length 582 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASKP1-201ENST00000412870 FBXW7Q969H0 707 aa12.67□□□□□ -0.38
CASKP1-201ENST00000412870 PHOX2BQ99453 314 aa12.66□□□□□ -0.38
CASKP1-201ENST00000412870 TMUB1Q9BVT8 246 aa12.65□□□□□ -0.38
CASKP1-201ENST00000412870 NYAP1Q6ZVC0 841 aa12.64□□□□□ -0.39
CASKP1-201ENST00000412870 C6orf132Q5T0Z8 1188 aa12.63□□□□□ -0.39
CASKP1-201ENST00000412870 FAM161AQ3B820 660 aa12.62□□□□□ -0.39
CASKP1-201ENST00000412870 HPS5Q9UPZ3 1129 aa12.61□□□□□ -0.39
CASKP1-201ENST00000412870 TRIM6-TRIM34B2RNG4 842 aa12.6□□□□□ -0.39
CASKP1-201ENST00000412870 MDM2Q00987 491 aaPredicted RBP12.6□□□□□ -0.39
CASKP1-201ENST00000412870 PADI6Q6TGC4 694 aa12.6□□□□□ -0.39
CASKP1-201ENST00000412870 SUPT5HO00267 1087 aaKnown RBP12.59□□□□□ -0.39
CASKP1-201ENST00000412870 ONECUT3O60422 494 aaPredicted RBP12.58□□□□□ -0.4
CASKP1-201ENST00000412870 CLCN1P35523 988 aa12.58□□□□□ -0.4
CASKP1-201ENST00000412870 FAM98CQ17RN3 349 aaKnown RBP12.58□□□□□ -0.4
CASKP1-201ENST00000412870 GPCPD1Q9NPB8 672 aa12.58□□□□□ -0.4
CASKP1-201ENST00000412870 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.58□□□□□ -0.4
CASKP1-201ENST00000412870 GFRA3O60609 400 aa12.57□□□□□ -0.4
CASKP1-201ENST00000412870 METTL3Q86U44 580 aaKnown RBP12.57□□□□□ -0.4
CASKP1-201ENST00000412870 NLRP7Q8WX94 980 aa12.57□□□□□ -0.4
CASKP1-201ENST00000412870 TSR3Q9UJK0 312 aaKnown RBP12.57□□□□□ -0.4
CASKP1-201ENST00000412870 CERKQ8TCT0 537 aa12.56□□□□□ -0.4
CASKP1-201ENST00000412870 GOPCQ9HD26 462 aa12.56□□□□□ -0.4
CASKP1-201ENST00000412870 ADGRG1Q9Y653 693 aa12.56□□□□□ -0.4
CASKP1-201ENST00000412870 TTC13Q8NBP0 860 aa12.55□□□□□ -0.4
CASKP1-201ENST00000412870 LRCH3Q96II8 777 aa12.55□□□□□ -0.4
CASKP1-201ENST00000412870 TRAF7Q6Q0C0 670 aa12.54□□□□□ -0.4
CASKP1-201ENST00000412870 PXYLP1Q8TE99 480 aa12.53□□□□□ -0.4
CASKP1-201ENST00000412870 OATP04181 439 aa12.52□□□□□ -0.41
CASKP1-201ENST00000412870 SSTR3P32745 418 aaPredicted RBP12.52□□□□□ -0.41
CASKP1-201ENST00000412870 LAPTM4AQ15012 233 aa12.52□□□□□ -0.41
CASKP1-201ENST00000412870 RBM27Q9P2N5 1060 aaKnown RBP12.52□□□□□ -0.41
CASKP1-201ENST00000412870 TSKSQ9UJT2 592 aa12.52□□□□□ -0.41
CASKP1-201ENST00000412870 PRSS12P56730 875 aa12.5□□□□□ -0.41
CASKP1-201ENST00000412870 ZMYND15Q9H091 742 aa12.5□□□□□ -0.41
CASKP1-201ENST00000412870 FAM217BQ9NTX9 383 aaPredicted RBP12.5□□□□□ -0.41
CASKP1-201ENST00000412870 SH3D19Q5HYK7 790 aa12.49□□□□□ -0.41
CASKP1-201ENST00000412870 TJAP1Q5JTD0 557 aa12.49□□□□□ -0.41
CASKP1-201ENST00000412870 ARXQ96QS3 562 aa12.49□□□□□ -0.41
CASKP1-201ENST00000412870 CDCA7LQ96GN5 454 aa12.48□□□□□ -0.41
CASKP1-201ENST00000412870 PCMTD1Q96MG8 357 aaPredicted RBP12.48□□□□□ -0.41
CASKP1-201ENST00000412870 PRKD2Q9BZL6 878 aa12.48□□□□□ -0.41
CASKP1-201ENST00000412870 FAM198AQ9UFP1 575 aa12.48□□□□□ -0.41
CASKP1-201ENST00000412870 BEGAINQ9BUH8 593 aa12.47□□□□□ -0.41
CASKP1-201ENST00000412870 SMAPO00193 183 aa12.46□□□□□ -0.41
CASKP1-201ENST00000412870 C3orf80F5H4A9 247 aa12.45□□□□□ -0.42
CASKP1-201ENST00000412870 PPP4CP60510 307 aa12.44□□□□□ -0.42
CASKP1-201ENST00000412870 SAMD7Q7Z3H4 446 aa12.43□□□□□ -0.42
CASKP1-201ENST00000412870 PPP1R18Q6NYC8 613 aa12.42□□□□□ -0.42
CASKP1-201ENST00000412870 NRG2O14511 850 aaPredicted RBP12.41□□□□□ -0.42
CASKP1-201ENST00000412870 SKIV2LQ15477 1246 aaKnown RBP12.41□□□□□ -0.42
CASKP1-201ENST00000412870 RBM46Q8TBY0 533 aaKnown RBP12.41□□□□□ -0.42
CASKP1-201ENST00000412870 MTRQ99707 1265 aa12.41□□□□□ -0.42
CASKP1-201ENST00000412870 RSPH6AQ9H0K4 717 aa12.41□□□□□ -0.42
CASKP1-201ENST00000412870 FLIIQ13045 1269 aa12.4□□□□□ -0.42
CASKP1-201ENST00000412870 PACS2Q86VP3 889 aa12.4□□□□□ -0.42
CASKP1-201ENST00000412870 ZNF516Q92618 1163 aa12.4□□□□□ -0.42
CASKP1-201ENST00000412870 PROCA1Q8NCQ7 364 aaPredicted RBP12.39□□□□□ -0.43
CASKP1-201ENST00000412870 EYA1Q99502 592 aa12.39□□□□□ -0.43
CASKP1-201ENST00000412870 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.37□□□□□ -0.43
CASKP1-201ENST00000412870 RCCD1A6NED2 376 aa12.37□□□□□ -0.43
CASKP1-201ENST00000412870 MYSM1Q5VVJ2 828 aa12.37□□□□□ -0.43
CASKP1-201ENST00000412870 POLR3EQ9NVU0 708 aa12.37□□□□□ -0.43
CASKP1-201ENST00000412870 IL21Q9HBE4 155 aa12.35□□□□□ -0.43
CASKP1-201ENST00000412870 HOMEZQ8IX15 550 aa12.34□□□□□ -0.43
CASKP1-201ENST00000412870 NKX2-3Q8TAU0 364 aa12.34□□□□□ -0.43
CASKP1-201ENST00000412870 TBC1D2Q9BYX2 928 aa12.34□□□□□ -0.43
CASKP1-201ENST00000412870 NUDT18Q6ZVK8 323 aa12.33□□□□□ -0.44
CASKP1-201ENST00000412870 V9GY48 417 aaPredicted RBP12.33□□□□□ -0.44
CASKP1-201ENST00000412870 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.32□□□□□ -0.44
CASKP1-201ENST00000412870 CLK2P49760 499 aaKnown RBP12.31□□□□□ -0.44
CASKP1-201ENST00000412870 APLP1P51693 650 aa12.31□□□□□ -0.44
CASKP1-201ENST00000412870 MCM6Q14566 821 aa12.31□□□□□ -0.44
CASKP1-201ENST00000412870 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.31□□□□□ -0.44
CASKP1-201ENST00000412870 CD46P15529 392 aa12.3□□□□□ -0.44
CASKP1-201ENST00000412870 ZNF787Q6DD87 383 aa12.3□□□□□ -0.44
CASKP1-201ENST00000412870 TATDN2Q93075 761 aa12.3□□□□□ -0.44
CASKP1-201ENST00000412870 PNMA3Q9UL41 463 aa12.3□□□□□ -0.44
CASKP1-201ENST00000412870 NBPF26B4DH59 902 aa12.29□□□□□ -0.44
CASKP1-201ENST00000412870 C1orf115Q9H7X2 142 aa12.29□□□□□ -0.44
CASKP1-201ENST00000412870 PDZRN3Q9UPQ7 1066 aa12.29□□□□□ -0.44
CASKP1-201ENST00000412870 RNF40O75150 1001 aa12.28□□□□□ -0.44
CASKP1-201ENST00000412870 DNAJB2P25686 324 aa12.28□□□□□ -0.44
CASKP1-201ENST00000412870 FBXO31Q5XUX0 539 aaPredicted RBP12.28□□□□□ -0.44
CASKP1-201ENST00000412870 CLUAP1Q96AJ1 413 aa12.28□□□□□ -0.44
CASKP1-201ENST00000412870 ATP1B4Q9UN42 357 aaPredicted RBP12.28□□□□□ -0.44
CASKP1-201ENST00000412870 SPIRE2Q8WWL2 714 aa12.27□□□□□ -0.45
CASKP1-201ENST00000412870 LIMD1Q9UGP4 676 aa12.27□□□□□ -0.45
CASKP1-201ENST00000412870 ZNF775Q96BV0 537 aaPredicted RBP12.26□□□□□ -0.45
CASKP1-201ENST00000412870 TMEM134Q9H6X4 195 aa12.26□□□□□ -0.45
CASKP1-201ENST00000412870 DDX11L8A8MPP1 907 aa12.25□□□□□ -0.45
CASKP1-201ENST00000412870 DIXDC1Q155Q3 683 aa12.25□□□□□ -0.45
CASKP1-201ENST00000412870 A6NJR5 290 aa12.24□□□□□ -0.45
CASKP1-201ENST00000412870 ARID3CA6NKF2 412 aa12.23□□□□□ -0.45
CASKP1-201ENST00000412870 UBTFP17480 764 aaKnown RBP12.23□□□□□ -0.45
CASKP1-201ENST00000412870 SULF1Q8IWU6 871 aa12.23□□□□□ -0.45
CASKP1-201ENST00000412870 COPS2P61201 443 aa12.22□□□□□ -0.45
CASKP1-201ENST00000412870 RIC3Q7Z5B4 369 aa12.22□□□□□ -0.45
CASKP1-201ENST00000412870 RFC5P40937 340 aa12.21□□□□□ -0.45
CASKP1-201ENST00000412870 SPTLC1O15269 473 aa12.2□□□□□ -0.46
CASKP1-201ENST00000412870 TRIM67Q6ZTA4 783 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms