RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 CIZ1Q9ULV3 898 aaPredicted RBP17.22■□□□□ 0.35
CLTCL1-201ENST00000412649 NUCB2P80303 420 aa17.22■□□□□ 0.35
CLTCL1-201ENST00000412649 AMER1Q5JTC6 1135 aaPredicted RBP17.21■□□□□ 0.35
CLTCL1-201ENST00000412649 ANKRD45Q5TZF3 282 aa17.21■□□□□ 0.35
CLTCL1-201ENST00000412649 TBC1D32Q96NH3 1257 aa17.21■□□□□ 0.35
CLTCL1-201ENST00000412649 PHF14O94880 888 aa17.2■□□□□ 0.34
CLTCL1-201ENST00000412649 KDM2BQ8NHM5 1336 aa17.2■□□□□ 0.34
CLTCL1-201ENST00000412649 MCCP23508 829 aa17.2■□□□□ 0.34
CLTCL1-201ENST00000412649 CCDC39Q9UFE4 941 aa17.2■□□□□ 0.34
CLTCL1-201ENST00000412649 UQCRHLA0A096LP55 91 aa17.2■□□□□ 0.34
CLTCL1-201ENST00000412649 UQCRHP07919 91 aa17.2■□□□□ 0.34
CLTCL1-201ENST00000412649 IGHDP01880 384 aa17.19■□□□□ 0.34
CLTCL1-201ENST00000412649 CAVIN1Q6NZI2 390 aaKnown RBP17.19■□□□□ 0.34
CLTCL1-201ENST00000412649 LNPKQ9C0E8 428 aa17.19■□□□□ 0.34
CLTCL1-201ENST00000412649 GAPVD1Q14C86 1478 aa17.19■□□□□ 0.34
CLTCL1-201ENST00000412649 RUNDC1Q96C34 613 aa17.18■□□□□ 0.34
CLTCL1-201ENST00000412649 FOXD4L5Q5VV16 416 aaPredicted RBP17.18■□□□□ 0.34
CLTCL1-201ENST00000412649 FOXD4L4Q8WXT5 416 aaPredicted RBP17.18■□□□□ 0.34
CLTCL1-201ENST00000412649 NKTRP30414 1462 aaKnown RBP17.17■□□□□ 0.34
CLTCL1-201ENST00000412649 HECW1Q76N89 1606 aa17.17■□□□□ 0.34
CLTCL1-201ENST00000412649 PARD3Q8TEW0 1356 aa17.16■□□□□ 0.34
CLTCL1-201ENST00000412649 ERBINQ96RT1 1412 aa17.16■□□□□ 0.34
CLTCL1-201ENST00000412649 DRC7Q8IY82 874 aa17.16■□□□□ 0.34
CLTCL1-201ENST00000412649 APBB1O00213 710 aa17.15■□□□□ 0.34
CLTCL1-201ENST00000412649 ABCC5O15440 1437 aa17.15■□□□□ 0.34
CLTCL1-201ENST00000412649 RSPH4AQ5TD94 716 aa17.15■□□□□ 0.34
CLTCL1-201ENST00000412649 HMGXB3Q12766 1538 aa17.15■□□□□ 0.34
CLTCL1-201ENST00000412649 EPRSP07814 1512 aaKnown RBP17.13■□□□□ 0.33
CLTCL1-201ENST00000412649 SEC24BO95487 1268 aa17.13■□□□□ 0.33
CLTCL1-201ENST00000412649 TNPO1Q92973 898 aaKnown RBP17.13■□□□□ 0.33
CLTCL1-201ENST00000412649 SPATA31E1Q6ZUB1 1445 aa17.12■□□□□ 0.33
CLTCL1-201ENST00000412649 GOLGA6L6A8MZA4 724 aa17.12■□□□□ 0.33
CLTCL1-201ENST00000412649 K7ELQ4 463 aaPredicted RBP17.12■□□□□ 0.33
CLTCL1-201ENST00000412649 ZNF771Q7L3S4 317 aaPredicted RBP17.12■□□□□ 0.33
CLTCL1-201ENST00000412649 TCP11L2Q8N4U5 519 aa17.11■□□□□ 0.33
CLTCL1-201ENST00000412649 UGGT2Q9NYU1 1516 aa17.11■□□□□ 0.33
CLTCL1-201ENST00000412649 RNF214Q8ND24 703 aa17.11■□□□□ 0.33
CLTCL1-201ENST00000412649 RALGAPBQ86X10 1494 aa17.11■□□□□ 0.33
CLTCL1-201ENST00000412649 MVPQ14764 893 aaKnown RBP17.1■□□□□ 0.33
CLTCL1-201ENST00000412649 TEX14Q8IWB6 1497 aa17.1■□□□□ 0.33
CLTCL1-201ENST00000412649 BICRAQ9NZM4 1560 aa17.1■□□□□ 0.33
CLTCL1-201ENST00000412649 CDK13Q14004 1512 aaKnown RBP17.1■□□□□ 0.33
CLTCL1-201ENST00000412649 CARMIL2Q6F5E8 1435 aa17.1■□□□□ 0.33
CLTCL1-201ENST00000412649 KIF16BQ96L93 1317 aa17.1■□□□□ 0.33
CLTCL1-201ENST00000412649 HMGN5P82970 282 aaKnown RBP17.09■□□□□ 0.33
CLTCL1-201ENST00000412649 GOLGA6L4A6NEF3 574 aa17.09■□□□□ 0.33
CLTCL1-201ENST00000412649 PRPF40AO75400 957 aaKnown RBP17.08■□□□□ 0.32
CLTCL1-201ENST00000412649 NOL8Q76FK4 1167 aaKnown RBP17.08■□□□□ 0.32
CLTCL1-201ENST00000412649 WWC1Q8IX03 1113 aa17.07■□□□□ 0.32
CLTCL1-201ENST00000412649 CDC45O75419 566 aa17.07■□□□□ 0.32
CLTCL1-201ENST00000412649 KANK1Q14678 1352 aa17.07■□□□□ 0.32
CLTCL1-201ENST00000412649 PRDM2Q13029 1718 aa17.06■□□□□ 0.32
CLTCL1-201ENST00000412649 XPCQ01831 940 aaPredicted RBP17.06■□□□□ 0.32
CLTCL1-201ENST00000412649 POLA1P09884 1462 aaPredicted RBP17.06■□□□□ 0.32
CLTCL1-201ENST00000412649 GRIN2BQ13224 1484 aa17.06■□□□□ 0.32
CLTCL1-201ENST00000412649 TCOF1Q13428 1488 aaKnown RBP17.06■□□□□ 0.32
CLTCL1-201ENST00000412649 CUL7Q14999 1698 aa17.05■□□□□ 0.32
CLTCL1-201ENST00000412649 PDS5BQ9NTI5 1447 aa17.05■□□□□ 0.32
CLTCL1-201ENST00000412649 MBD3O95983 291 aa17.05■□□□□ 0.32
CLTCL1-201ENST00000412649 FOXD4L6Q3SYB3 417 aaPredicted RBP17.05■□□□□ 0.32
CLTCL1-201ENST00000412649 FOXD4L3Q6VB84 417 aaPredicted RBP17.05■□□□□ 0.32
CLTCL1-201ENST00000412649 PRDM10Q9NQV6 1147 aa17.05■□□□□ 0.32
CLTCL1-201ENST00000412649 RARSP54136 660 aaKnown RBP17.05■□□□□ 0.32
CLTCL1-201ENST00000412649 ABCA10Q8WWZ4 1543 aa17.05■□□□□ 0.32
CLTCL1-201ENST00000412649 THOC2Q8NI27 1593 aaKnown RBP17.05■□□□□ 0.32
CLTCL1-201ENST00000412649 RABEP1Q15276 862 aa17.05■□□□□ 0.32
CLTCL1-201ENST00000412649 UNC13AQ9UPW8 1703 aa17.04■□□□□ 0.32
CLTCL1-201ENST00000412649 REC8O95072 547 aa17.04■□□□□ 0.32
CLTCL1-201ENST00000412649 SASS6Q6UVJ0 657 aa17.04■□□□□ 0.32
CLTCL1-201ENST00000412649 SENP3Q9H4L4 574 aaPredicted RBP17.04■□□□□ 0.32
CLTCL1-201ENST00000412649 WDR63Q8IWG1 891 aa17.04■□□□□ 0.32
CLTCL1-201ENST00000412649 DIAPH3Q9NSV4 1193 aa17.04■□□□□ 0.32
CLTCL1-201ENST00000412649 SNAPC4Q5SXM2 1469 aa17.04■□□□□ 0.32
CLTCL1-201ENST00000412649 PLEKHH1Q9ULM0 1364 aa17.03■□□□□ 0.32
CLTCL1-201ENST00000412649 ZRSR1Q15695 479 aaKnown RBP17.03■□□□□ 0.32
CLTCL1-201ENST00000412649 C9orf84Q5VXU9 1444 aa17.03■□□□□ 0.32
CLTCL1-201ENST00000412649 OFD1O75665 1012 aa17.03■□□□□ 0.32
CLTCL1-201ENST00000412649 HAP1P54257 671 aaPredicted RBP17.03■□□□□ 0.32
CLTCL1-201ENST00000412649 INTS3Q68E01 1043 aaKnown RBP17.02■□□□□ 0.32
CLTCL1-201ENST00000412649 DYNC1I1O14576 645 aa17.01■□□□□ 0.31
CLTCL1-201ENST00000412649 SRPK2P78362 688 aaKnown RBP17.01■□□□□ 0.31
CLTCL1-201ENST00000412649 TSPY26PQ9H489 355 aa17.01■□□□□ 0.31
CLTCL1-201ENST00000412649 NRDCO43847 1150 aa17.01■□□□□ 0.31
CLTCL1-201ENST00000412649 SSFA2P28290 1259 aa17.01■□□□□ 0.31
CLTCL1-201ENST00000412649 DISP3Q9P2K9 1392 aa17.01■□□□□ 0.31
CLTCL1-201ENST00000412649 ZHX1Q9UKY1 873 aaPredicted RBP17■□□□□ 0.31
CLTCL1-201ENST00000412649 PCDHB15Q9Y5E8 787 aa17■□□□□ 0.31
CLTCL1-201ENST00000412649 TOPBP1Q92547 1522 aa17■□□□□ 0.31
CLTCL1-201ENST00000412649 EXOSC9Q06265 439 aaKnown RBP17■□□□□ 0.31
CLTCL1-201ENST00000412649 KLHL40Q2TBA0 621 aa17■□□□□ 0.31
CLTCL1-201ENST00000412649 CWC22Q9HCG8 908 aaKnown RBP17■□□□□ 0.31
CLTCL1-201ENST00000412649 ZMYM4Q5VZL5 1548 aa17■□□□□ 0.31
CLTCL1-201ENST00000412649 CC2D2AQ9P2K1 1620 aa16.99■□□□□ 0.31
CLTCL1-201ENST00000412649 PER1O15534 1290 aaPredicted RBP16.99■□□□□ 0.31
CLTCL1-201ENST00000412649 CHD1LQ86WJ1 897 aa16.99■□□□□ 0.31
CLTCL1-201ENST00000412649 FSD2A1L4K1 749 aa16.99■□□□□ 0.31
CLTCL1-201ENST00000412649 TROQ12816 1431 aaPredicted RBP16.98■□□□□ 0.31
CLTCL1-201ENST00000412649 ATF7IPQ6VMQ6 1270 aa16.98■□□□□ 0.31
CLTCL1-201ENST00000412649 HMMRO75330 724 aa16.98■□□□□ 0.31
CLTCL1-201ENST00000412649 INSRP06213 1382 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms