RNA–Protein interactions for RNA: ENST00000410662.1

RN7SKP235-201, Transcript of RNA, 7SK small nuclear pseudogene 235, humanhuman

BASIC

Gene RN7SKP235, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP235-201ENST00000410662 FAM198AQ9UFP1 575 aa7.39□□□□□ -1.23
RN7SKP235-201ENST00000410662 TSKSQ9UJT2 592 aa7.39□□□□□ -1.23
RN7SKP235-201ENST00000410662 TIMELESSQ9UNS1 1208 aa7.39□□□□□ -1.23
RN7SKP235-201ENST00000410662 WRNQ14191 1432 aaPredicted RBP eCLIP7.38□□□□□ -1.23
RN7SKP235-201ENST00000410662 TRIM6-TRIM34B2RNG4 842 aa7.38□□□□□ -1.23
RN7SKP235-201ENST00000410662 ONECUT3O60422 494 aaPredicted RBP7.38□□□□□ -1.23
RN7SKP235-201ENST00000410662 EYA1Q99502 592 aa7.38□□□□□ -1.23
RN7SKP235-201ENST00000410662 TOP2BQ02880 1626 aa7.38□□□□□ -1.23
RN7SKP235-201ENST00000410662 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.37□□□□□ -1.23
RN7SKP235-201ENST00000410662 KCNH8Q96L42 1107 aa7.37□□□□□ -1.23
RN7SKP235-201ENST00000410662 FAM217BQ9NTX9 383 aaPredicted RBP7.37□□□□□ -1.23
RN7SKP235-201ENST00000410662 POLA1P09884 1462 aaPredicted RBP7.36□□□□□ -1.23
RN7SKP235-201ENST00000410662 FGD5Q6ZNL6 1462 aa7.36□□□□□ -1.23
RN7SKP235-201ENST00000410662 NBPF26B4DH59 902 aa7.36□□□□□ -1.23
RN7SKP235-201ENST00000410662 SSTR3P32745 418 aaPredicted RBP7.36□□□□□ -1.23
RN7SKP235-201ENST00000410662 PACS2Q86VP3 889 aa7.36□□□□□ -1.23
RN7SKP235-201ENST00000410662 KCNK17Q96T54 332 aa7.36□□□□□ -1.23
RN7SKP235-201ENST00000410662 TARBP1Q13395 1621 aaKnown RBP7.36□□□□□ -1.23
RN7SKP235-201ENST00000410662 ERBB3P21860 1342 aa7.35□□□□□ -1.23
RN7SKP235-201ENST00000410662 ST18O60284 1047 aa7.35□□□□□ -1.23
RN7SKP235-201ENST00000410662 RAD54L2Q9Y4B4 1467 aa7.35□□□□□ -1.23
RN7SKP235-201ENST00000410662 SOGA1O94964 1423 aa7.35□□□□□ -1.23
RN7SKP235-201ENST00000410662 RCCD1A6NED2 376 aa7.34□□□□□ -1.23
RN7SKP235-201ENST00000410662 VARS2Q5ST30 1063 aaKnown RBP7.34□□□□□ -1.23
RN7SKP235-201ENST00000410662 NUDT18Q6ZVK8 323 aa7.34□□□□□ -1.23
RN7SKP235-201ENST00000410662 NLRP7Q8WX94 980 aa7.34□□□□□ -1.23
RN7SKP235-201ENST00000410662 TATDN2Q93075 761 aa7.34□□□□□ -1.23
RN7SKP235-201ENST00000410662 ZBED2Q9BTP6 218 aa7.34□□□□□ -1.23
RN7SKP235-201ENST00000410662 IFT140Q96RY7 1462 aa7.34□□□□□ -1.23
RN7SKP235-201ENST00000410662 WDR97A6NE52 1622 aa7.34□□□□□ -1.24
RN7SKP235-201ENST00000410662 C3orf80F5H4A9 247 aa7.33□□□□□ -1.24
RN7SKP235-201ENST00000410662 ARHGAP33O14559 1287 aa7.33□□□□□ -1.24
RN7SKP235-201ENST00000410662 DNAJB2P25686 324 aa7.33□□□□□ -1.24
RN7SKP235-201ENST00000410662 PROX2Q3B8N5 592 aa7.33□□□□□ -1.24
RN7SKP235-201ENST00000410662 SLC4A5Q9BY07 1137 aa7.33□□□□□ -1.24
RN7SKP235-201ENST00000410662 PNMA3Q9UL41 463 aa7.33□□□□□ -1.24
RN7SKP235-201ENST00000410662 ZNF608Q9ULD9 1512 aaPredicted RBP7.32□□□□□ -1.24
RN7SKP235-201ENST00000410662 PBX2P40425 430 aa7.32□□□□□ -1.24
RN7SKP235-201ENST00000410662 SH3D19Q5HYK7 790 aa7.32□□□□□ -1.24
RN7SKP235-201ENST00000410662 BEGAINQ9BUH8 593 aa7.32□□□□□ -1.24
RN7SKP235-201ENST00000410662 RSPH6AQ9H0K4 717 aa7.32□□□□□ -1.24
RN7SKP235-201ENST00000410662 PSEN2P49810 448 aa7.31□□□□□ -1.24
RN7SKP235-201ENST00000410662 EMP3P54852 163 aa7.31□□□□□ -1.24
RN7SKP235-201ENST00000410662 POTEEQ6S8J3 1075 aa7.31□□□□□ -1.24
RN7SKP235-201ENST00000410662 ZNF687Q8N1G0 1237 aa7.31□□□□□ -1.24
RN7SKP235-201ENST00000410662 TMEM134Q9H6X4 195 aa7.31□□□□□ -1.24
RN7SKP235-201ENST00000410662 C14orf37Q86TY3 774 aa7.3□□□□□ -1.24
RN7SKP235-201ENST00000410662 SULF1Q8IWU6 871 aa7.3□□□□□ -1.24
RN7SKP235-201ENST00000410662 KIAA1468Q9P260 1216 aa7.3□□□□□ -1.24
RN7SKP235-201ENST00000410662 RABGEF1Q9UJ41 708 aa7.3□□□□□ -1.24
RN7SKP235-201ENST00000410662 ABCA10Q8WWZ4 1543 aa7.3□□□□□ -1.24
RN7SKP235-201ENST00000410662 AQRO60306 1485 aaKnown RBP eCLIP7.3□□□□□ -1.24
RN7SKP235-201ENST00000410662 EIF4G3O43432 1585 aaKnown RBP7.29□□□□□ -1.24
RN7SKP235-201ENST00000410662 SKIV2LQ15477 1246 aaKnown RBP7.29□□□□□ -1.24
RN7SKP235-201ENST00000410662 PCMTD1Q96MG8 357 aaPredicted RBP7.29□□□□□ -1.24
RN7SKP235-201ENST00000410662 TDRD9Q8NDG6 1382 aaKnown RBP7.29□□□□□ -1.24
RN7SKP235-201ENST00000410662 CD46P15529 392 aa7.28□□□□□ -1.24
RN7SKP235-201ENST00000410662 DIXDC1Q155Q3 683 aa7.28□□□□□ -1.24
RN7SKP235-201ENST00000410662 MARVELD3Q96A59 401 aa7.28□□□□□ -1.24
RN7SKP235-201ENST00000410662 PBRM1Q86U86 1689 aa7.28□□□□□ -1.24
RN7SKP235-201ENST00000410662 ABCA5Q8WWZ7 1642 aa7.27□□□□□ -1.25
RN7SKP235-201ENST00000410662 SMAPO00193 183 aa7.27□□□□□ -1.25
RN7SKP235-201ENST00000410662 DMRTA1Q5VZB9 504 aa7.27□□□□□ -1.25
RN7SKP235-201ENST00000410662 FAM205CA6NFA0 338 aa7.26□□□□□ -1.25
RN7SKP235-201ENST00000410662 MYSM1Q5VVJ2 828 aa7.26□□□□□ -1.25
RN7SKP235-201ENST00000410662 VPS9D1Q9Y2B5 631 aa7.26□□□□□ -1.25
RN7SKP235-201ENST00000410662 AXIN2Q9Y2T1 843 aa7.26□□□□□ -1.25
RN7SKP235-201ENST00000410662 GAPVD1Q14C86 1478 aa7.25□□□□□ -1.25
RN7SKP235-201ENST00000410662 FAM163AQ96GL9 167 aaPredicted RBP7.25□□□□□ -1.25
RN7SKP235-201ENST00000410662 HS3ST6Q96QI5 342 aa7.25□□□□□ -1.25
RN7SKP235-201ENST00000410662 TBC1D2Q9BYX2 928 aa7.25□□□□□ -1.25
RN7SKP235-201ENST00000410662 RUSC2Q8N2Y8 1516 aa7.24□□□□□ -1.25
RN7SKP235-201ENST00000410662 DDX11L8A8MPP1 907 aa7.24□□□□□ -1.25
RN7SKP235-201ENST00000410662 TK2O00142 265 aa7.24□□□□□ -1.25
RN7SKP235-201ENST00000410662 LAPTM4BQ86VI4 370 aa7.24□□□□□ -1.25
RN7SKP235-201ENST00000410662 POTEB3A0JP26 581 aa7.23□□□□□ -1.25
RN7SKP235-201ENST00000410662 BHMG1C9JSJ3 638 aaPredicted RBP7.23□□□□□ -1.25
RN7SKP235-201ENST00000410662 FAM98CQ17RN3 349 aaKnown RBP7.23□□□□□ -1.25
RN7SKP235-201ENST00000410662 LCE2DQ5TA82 110 aaPredicted RBP7.23□□□□□ -1.25
RN7SKP235-201ENST00000410662 POTEBQ6S5H4 581 aa7.23□□□□□ -1.25
RN7SKP235-201ENST00000410662 SPIRE2Q8WWL2 714 aa7.23□□□□□ -1.25
RN7SKP235-201ENST00000410662 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.23□□□□□ -1.25
RN7SKP235-201ENST00000410662 CHD1O14646 1710 aa7.23□□□□□ -1.25
RN7SKP235-201ENST00000410662 GRIN2BQ13224 1484 aa7.23□□□□□ -1.25
RN7SKP235-201ENST00000410662 CLK2P49760 499 aaKnown RBP7.22□□□□□ -1.25
RN7SKP235-201ENST00000410662 RSPH4AQ5TD94 716 aa7.22□□□□□ -1.25
RN7SKP235-201ENST00000410662 NBPF3Q9H094 633 aa7.22□□□□□ -1.25
RN7SKP235-201ENST00000410662 SEPT9Q9UHD8 586 aaPredicted RBP7.22□□□□□ -1.25
RN7SKP235-201ENST00000410662 SNAPC4Q5SXM2 1469 aa7.22□□□□□ -1.25
RN7SKP235-201ENST00000410662 KIF27Q86VH2 1401 aa7.21□□□□□ -1.25
RN7SKP235-201ENST00000410662 GJA5P36382 358 aa7.21□□□□□ -1.26
RN7SKP235-201ENST00000410662 FLIIQ13045 1269 aa7.21□□□□□ -1.26
RN7SKP235-201ENST00000410662 TUSC1Q2TAM9 212 aa7.21□□□□□ -1.26
RN7SKP235-201ENST00000410662 SWT1Q5T5J6 900 aaKnown RBP7.21□□□□□ -1.26
RN7SKP235-201ENST00000410662 PROCA1Q8NCQ7 364 aaPredicted RBP7.21□□□□□ -1.26
RN7SKP235-201ENST00000410662 POLR3EQ9NVU0 708 aa7.21□□□□□ -1.26
RN7SKP235-201ENST00000410662 ERICH3Q5RHP9 1530 aa7.21□□□□□ -1.26
RN7SKP235-201ENST00000410662 MAGI1Q96QZ7 1491 aaPredicted RBP7.2□□□□□ -1.26
RN7SKP235-201ENST00000410662 HDGFP51858 240 aaKnown RBP7.2□□□□□ -1.26
RN7SKP235-201ENST00000410662 NUTM1Q86Y26 1132 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms