RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 ATP7AQ04656 1500 aa16.47■□□□□ 0.23
ATG9A-203ENST00000409033 UHRF1BP1Q6BDS2 1440 aa16.47■□□□□ 0.23
ATG9A-203ENST00000409033 U2AF1L5P0DN76 240 aaPredicted RBP16.47■□□□□ 0.23
ATG9A-203ENST00000409033 U2AF1Q01081 240 aaKnown RBP eCLIP16.47■□□□□ 0.23
ATG9A-203ENST00000409033 SLC24A1O60721 1099 aa16.45■□□□□ 0.22
ATG9A-203ENST00000409033 GGNBP2Q9H3C7 697 aa16.45■□□□□ 0.22
ATG9A-203ENST00000409033 CLASP1Q7Z460 1538 aa16.45■□□□□ 0.22
ATG9A-203ENST00000409033 MAST1Q9Y2H9 1570 aa16.45■□□□□ 0.22
ATG9A-203ENST00000409033 CFAP53Q96M91 514 aa16.44■□□□□ 0.22
ATG9A-203ENST00000409033 LAS1LQ9Y4W2 734 aaKnown RBP16.44■□□□□ 0.22
ATG9A-203ENST00000409033 KDM5CP41229 1560 aa16.43■□□□□ 0.22
ATG9A-203ENST00000409033 PER1O15534 1290 aaPredicted RBP16.43■□□□□ 0.22
ATG9A-203ENST00000409033 BCL2L13Q9BXK5 485 aa16.43■□□□□ 0.22
ATG9A-203ENST00000409033 UHRF1BP1LA0JNW5 1464 aa16.43■□□□□ 0.22
ATG9A-203ENST00000409033 PRAM1Q96QH2 718 aa16.42■□□□□ 0.22
ATG9A-203ENST00000409033 ZNF518AQ6AHZ1 1483 aa16.42■□□□□ 0.22
ATG9A-203ENST00000409033 RRP1P56182 461 aaKnown RBP16.42■□□□□ 0.22
ATG9A-203ENST00000409033 SHROOM2Q13796 1616 aa16.42■□□□□ 0.22
ATG9A-203ENST00000409033 RGS3P49796 1198 aa16.41■□□□□ 0.22
ATG9A-203ENST00000409033 ATP10AO60312 1499 aa16.41■□□□□ 0.22
ATG9A-203ENST00000409033 NEFMP07197 916 aa16.41■□□□□ 0.22
ATG9A-203ENST00000409033 GOLGA2Q08379 1002 aa16.41■□□□□ 0.22
ATG9A-203ENST00000409033 SKAP1Q86WV1 359 aa16.41■□□□□ 0.22
ATG9A-203ENST00000409033 EVC2Q86UK5 1308 aa16.39■□□□□ 0.21
ATG9A-203ENST00000409033 KDM5DQ9BY66 1539 aa16.39■□□□□ 0.21
ATG9A-203ENST00000409033 C14orf37Q86TY3 774 aa16.39■□□□□ 0.21
ATG9A-203ENST00000409033 MTHFSP49914 203 aa16.38■□□□□ 0.21
ATG9A-203ENST00000409033 CRBNQ96SW2 442 aa16.38■□□□□ 0.21
ATG9A-203ENST00000409033 RTEL1-TNFRSF6BF6WH68 1400 aa16.38■□□□□ 0.21
ATG9A-203ENST00000409033 ZBTB7CA1YPR0 619 aa16.38■□□□□ 0.21
ATG9A-203ENST00000409033 SCAF11Q99590 1463 aaKnown RBP16.38■□□□□ 0.21
ATG9A-203ENST00000409033 CLUAP1Q96AJ1 413 aa16.37■□□□□ 0.21
ATG9A-203ENST00000409033 ZFYVE16Q7Z3T8 1539 aa16.37■□□□□ 0.21
ATG9A-203ENST00000409033 ANP32AP39687 249 aaKnown RBP16.37■□□□□ 0.21
ATG9A-203ENST00000409033 WAPLQ7Z5K2 1190 aa16.37■□□□□ 0.21
ATG9A-203ENST00000409033 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.36■□□□□ 0.21
ATG9A-203ENST00000409033 NBR1Q14596 966 aa16.36■□□□□ 0.21
ATG9A-203ENST00000409033 FBLN1P23142 703 aa16.35■□□□□ 0.21
ATG9A-203ENST00000409033 AMER1Q5JTC6 1135 aaPredicted RBP16.35■□□□□ 0.21
ATG9A-203ENST00000409033 YEATS2Q9ULM3 1422 aa16.35■□□□□ 0.21
ATG9A-203ENST00000409033 MAPK8IP3Q9UPT6 1336 aa16.35■□□□□ 0.21
ATG9A-203ENST00000409033 CARD14Q9BXL6 1004 aa16.34■□□□□ 0.21
ATG9A-203ENST00000409033 DAXXQ9UER7 740 aaPredicted RBP16.34■□□□□ 0.21
ATG9A-203ENST00000409033 CGNL1Q0VF96 1302 aa16.34■□□□□ 0.21
ATG9A-203ENST00000409033 COL17A1Q9UMD9 1497 aaPredicted RBP16.34■□□□□ 0.21
ATG9A-203ENST00000409033 TXNDC2Q86VQ3 553 aa16.34■□□□□ 0.21
ATG9A-203ENST00000409033 CEBPAP49715 358 aaPredicted RBP16.34■□□□□ 0.21
ATG9A-203ENST00000409033 STAC3Q96MF2 364 aa16.34■□□□□ 0.21
ATG9A-203ENST00000409033 NSD3Q9BZ95 1437 aa16.34■□□□□ 0.21
ATG9A-203ENST00000409033 HDGFL2Q7Z4V5 671 aaPredicted RBP16.33■□□□□ 0.21
ATG9A-203ENST00000409033 PARD3Q8TEW0 1356 aa16.33■□□□□ 0.2
ATG9A-203ENST00000409033 SMG6Q86US8 1419 aaKnown RBP16.33■□□□□ 0.2
ATG9A-203ENST00000409033 NPATQ14207 1427 aa16.32■□□□□ 0.2
ATG9A-203ENST00000409033 PDE3BQ13370 1112 aa16.32■□□□□ 0.2
ATG9A-203ENST00000409033 C20orf194Q5TEA3 1177 aa16.31■□□□□ 0.2
ATG9A-203ENST00000409033 POGZQ7Z3K3 1410 aa16.31■□□□□ 0.2
ATG9A-203ENST00000409033 C14orf93Q9H972 538 aaKnown RBP16.31■□□□□ 0.2
ATG9A-203ENST00000409033 TERF2IPQ9NYB0 399 aa16.31■□□□□ 0.2
ATG9A-203ENST00000409033 CABP1Q9NZU7 370 aa16.31■□□□□ 0.2
ATG9A-203ENST00000409033 PLXNC1O60486 1568 aa16.3■□□□□ 0.2
ATG9A-203ENST00000409033 GPRASP1Q5JY77 1395 aa16.3■□□□□ 0.2
ATG9A-203ENST00000409033 SLC52A1Q9NWF4 448 aa16.3■□□□□ 0.2
ATG9A-203ENST00000409033 IQGAP3Q86VI3 1631 aa16.29■□□□□ 0.2
ATG9A-203ENST00000409033 SLC26A8Q96RN1 970 aa16.29■□□□□ 0.2
ATG9A-203ENST00000409033 ERICH6BQ5W0A0 696 aa16.29■□□□□ 0.2
ATG9A-203ENST00000409033 UNC13BO14795 1591 aa16.28■□□□□ 0.2
ATG9A-203ENST00000409033 BCAR3O75815 825 aa16.28■□□□□ 0.2
ATG9A-203ENST00000409033 TSPOAP1O95153 1857 aa16.27■□□□□ 0.2
ATG9A-203ENST00000409033 PRDM15P57071 1507 aaPredicted RBP16.27■□□□□ 0.2
ATG9A-203ENST00000409033 TCP11L2Q8N4U5 519 aa16.27■□□□□ 0.19
ATG9A-203ENST00000409033 CDK19Q9BWU1 502 aa16.27■□□□□ 0.19
ATG9A-203ENST00000409033 HMOX1P09601 288 aa16.27■□□□□ 0.19
ATG9A-203ENST00000409033 MAGI2Q86UL8 1455 aa16.26■□□□□ 0.19
ATG9A-203ENST00000409033 CLTCL1P53675 1640 aa16.26■□□□□ 0.19
ATG9A-203ENST00000409033 ELL2O00472 640 aaPredicted RBP16.26■□□□□ 0.19
ATG9A-203ENST00000409033 E9PCH4 1651 aa16.26■□□□□ 0.19
ATG9A-203ENST00000409033 TCERG1O14776 1098 aaKnown RBP16.26■□□□□ 0.19
ATG9A-203ENST00000409033 COG6Q9Y2V7 657 aa16.25■□□□□ 0.19
ATG9A-203ENST00000409033 EIF2AK4Q9P2K8 1649 aaKnown RBP16.25■□□□□ 0.19
ATG9A-203ENST00000409033 LMOD2Q6P5Q4 547 aa16.24■□□□□ 0.19
ATG9A-203ENST00000409033 TRPM1Q7Z4N2 1603 aa16.24■□□□□ 0.19
ATG9A-203ENST00000409033 FTSJ3Q8IY81 847 aaKnown RBP16.24■□□□□ 0.19
ATG9A-203ENST00000409033 NCKAP5LQ9HCH0 1330 aa16.23■□□□□ 0.19
ATG9A-203ENST00000409033 PANK1Q8TE04 598 aa16.23■□□□□ 0.19
ATG9A-203ENST00000409033 TRPM2O94759 1503 aa16.22■□□□□ 0.19
ATG9A-203ENST00000409033 RBM33Q96EV2 1170 aaKnown RBP16.22■□□□□ 0.19
ATG9A-203ENST00000409033 TSR2Q969E8 191 aaKnown RBP16.22■□□□□ 0.19
ATG9A-203ENST00000409033 ANP32EQ9BTT0 268 aa16.22■□□□□ 0.19
ATG9A-203ENST00000409033 SPINK5Q9NQ38 1064 aaPredicted RBP16.21■□□□□ 0.19
ATG9A-203ENST00000409033 RPGRIP1LQ68CZ1 1315 aa16.21■□□□□ 0.19
ATG9A-203ENST00000409033 ZBTB47Q9UFB7 747 aaPredicted RBP16.21■□□□□ 0.19
ATG9A-203ENST00000409033 PLEKHH1Q9ULM0 1364 aa16.21■□□□□ 0.19
ATG9A-203ENST00000409033 PAK3O75914 559 aaPredicted RBP16.21■□□□□ 0.19
ATG9A-203ENST00000409033 NUTM2GQ5VZR2 741 aa16.2■□□□□ 0.18
ATG9A-203ENST00000409033 DMRT2Q9Y5R5 561 aa16.2■□□□□ 0.18
ATG9A-203ENST00000409033 LRPPRCP42704 1394 aaKnown RBP16.2■□□□□ 0.18
ATG9A-203ENST00000409033 PTPRTO14522 1441 aa16.2■□□□□ 0.18
ATG9A-203ENST00000409033 ABCA9Q8IUA7 1624 aa16.2■□□□□ 0.18
ATG9A-203ENST00000409033 E9PSI1 815 aa16.19■□□□□ 0.18
ATG9A-203ENST00000409033 RUNDC1Q96C34 613 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms