RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 PRAG1Q86YV5 1406 aa29.28■■■□□ 2.28
CHKB-201ENST00000406938 STAC3Q96MF2 364 aa29.25■■■□□ 2.27
CHKB-201ENST00000406938 CEP170BQ9Y4F5 1589 aaPredicted RBP29.25■■■□□ 2.27
CHKB-201ENST00000406938 ZNF142P52746 1687 aaPredicted RBP29.22■■■□□ 2.27
CHKB-201ENST00000406938 NRXN1Q9ULB1 1477 aa29.22■■■□□ 2.27
CHKB-201ENST00000406938 ADGRF5Q8IZF2 1346 aa29.2■■■□□ 2.27
CHKB-201ENST00000406938 RIMS2Q9UQ26 1411 aa29.2■■■□□ 2.26
CHKB-201ENST00000406938 RALGAPBQ86X10 1494 aa29.19■■■□□ 2.26
CHKB-201ENST00000406938 ZFYVE9O95405 1425 aa29.19■■■□□ 2.26
CHKB-201ENST00000406938 NUTM2DQ5VT03 806 aaPredicted RBP29.18■■■□□ 2.26
CHKB-201ENST00000406938 SETD1BQ9UPS6 1966 aaKnown RBP29.18■■■□□ 2.26
CHKB-201ENST00000406938 TMEM2Q9UHN6 1383 aa29.17■■■□□ 2.26
CHKB-201ENST00000406938 TRPM1Q7Z4N2 1603 aa29.17■■■□□ 2.26
CHKB-201ENST00000406938 VGFO15240 615 aaPredicted RBP29.16■■■□□ 2.26
CHKB-201ENST00000406938 PIK3C2GO75747 1445 aa29.16■■■□□ 2.26
CHKB-201ENST00000406938 SLIT1O75093 1534 aa29.13■■■□□ 2.25
CHKB-201ENST00000406938 ARHGAP23Q9P227 1491 aa29.12■■■□□ 2.25
CHKB-201ENST00000406938 THEMISQ8N1K5 641 aaPredicted RBP29.11■■■□□ 2.25
CHKB-201ENST00000406938 ROCK2O75116 1388 aaKnown RBP29.09■■■□□ 2.25
CHKB-201ENST00000406938 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.09■■■□□ 2.25
CHKB-201ENST00000406938 KIAA1210Q9ULL0 1709 aa29.08■■■□□ 2.25
CHKB-201ENST00000406938 HDGFP51858 240 aaKnown RBP29.05■■■□□ 2.24
CHKB-201ENST00000406938 GPRASP1Q5JY77 1395 aa29.05■■■□□ 2.24
CHKB-201ENST00000406938 NBPF1Q3BBV0 1214 aa29.05■■■□□ 2.24
CHKB-201ENST00000406938 CFAP70Q5T0N1 1121 aa29.04■■■□□ 2.24
CHKB-201ENST00000406938 LAMC1P11047 1609 aa29.03■■■□□ 2.24
CHKB-201ENST00000406938 LTKP29376 864 aa29.02■■■□□ 2.24
CHKB-201ENST00000406938 CARD11Q9BXL7 1154 aa29.02■■■□□ 2.24
CHKB-201ENST00000406938 SENP3Q9H4L4 574 aaPredicted RBP29.02■■■□□ 2.24
CHKB-201ENST00000406938 EID1Q9Y6B2 187 aa29.02■■■□□ 2.24
CHKB-201ENST00000406938 TXNDC2Q86VQ3 553 aa29.01■■■□□ 2.23
CHKB-201ENST00000406938 C14orf93Q9H972 538 aaKnown RBP29.01■■■□□ 2.23
CHKB-201ENST00000406938 SCAF11Q99590 1463 aaKnown RBP29■■■□□ 2.23
CHKB-201ENST00000406938 SETBP1Q9Y6X0 1596 aa29■■■□□ 2.23
CHKB-201ENST00000406938 NRXN3Q9Y4C0 1643 aa28.99■■■□□ 2.23
CHKB-201ENST00000406938 PLEKHG1Q9ULL1 1385 aa28.98■■■□□ 2.23
CHKB-201ENST00000406938 IQGAP1P46940 1657 aa28.97■■■□□ 2.23
CHKB-201ENST00000406938 ALKQ9UM73 1620 aa28.97■■■□□ 2.23
CHKB-201ENST00000406938 ADGRB1O14514 1584 aa28.96■■■□□ 2.23
CHKB-201ENST00000406938 USP47Q96K76 1375 aa28.96■■■□□ 2.23
CHKB-201ENST00000406938 EIF4G2P78344 907 aaKnown RBP eCLIP28.94■■■□□ 2.22
CHKB-201ENST00000406938 LMTK3Q96Q04 1460 aa28.94■■■□□ 2.22
CHKB-201ENST00000406938 ASXL1Q8IXJ9 1541 aa28.94■■■□□ 2.22
CHKB-201ENST00000406938 SETD1AO15047 1707 aaKnown RBP28.92■■■□□ 2.22
CHKB-201ENST00000406938 HSPA5P11021 654 aaKnown RBP28.91■■■□□ 2.22
CHKB-201ENST00000406938 ANKLE2Q86XL3 938 aa28.91■■■□□ 2.22
CHKB-201ENST00000406938 BCANQ96GW7 911 aa28.9■■■□□ 2.22
CHKB-201ENST00000406938 ADAMTS13Q76LX8 1427 aa28.9■■■□□ 2.22
CHKB-201ENST00000406938 TMEM132EQ6IEE7 984 aa28.89■■■□□ 2.22
CHKB-201ENST00000406938 HIRIP3Q9BW71 556 aaPredicted RBP28.88■■■□□ 2.21
CHKB-201ENST00000406938 POLR1AO95602 1720 aaPredicted RBP28.87■■■□□ 2.21
CHKB-201ENST00000406938 ZNF316A6NFI3 1004 aaPredicted RBP28.87■■■□□ 2.21
CHKB-201ENST00000406938 MED14O60244 1454 aa28.85■■■□□ 2.21
CHKB-201ENST00000406938 DIP2AQ14689 1571 aa28.84■■■□□ 2.21
CHKB-201ENST00000406938 HSPA2P54652 639 aa28.83■■■□□ 2.21
CHKB-201ENST00000406938 METP08581 1390 aa28.83■■■□□ 2.21
CHKB-201ENST00000406938 NPHP4O75161 1426 aaPredicted RBP28.8■■■□□ 2.2
CHKB-201ENST00000406938 YTHDC2Q9H6S0 1430 aaKnown RBP28.8■■■□□ 2.2
CHKB-201ENST00000406938 EIF3AQ14152 1382 aaKnown RBP28.8■■■□□ 2.2
CHKB-201ENST00000406938 SLC26A8Q96RN1 970 aa28.8■■■□□ 2.2
CHKB-201ENST00000406938 NCKAP5LQ9HCH0 1330 aa28.8■■■□□ 2.2
CHKB-201ENST00000406938 ST20-MTHFSA0A0A6YYL1 179 aa28.8■■■□□ 2.2
CHKB-201ENST00000406938 TRAK1Q9UPV9 953 aa28.77■■■□□ 2.2
CHKB-201ENST00000406938 TBX22Q9Y458 520 aa28.76■■■□□ 2.2
CHKB-201ENST00000406938 ARHGEF28Q8N1W1 1705 aaKnown RBP28.75■■■□□ 2.19
CHKB-201ENST00000406938 LRPPRCP42704 1394 aaKnown RBP28.75■■■□□ 2.19
CHKB-201ENST00000406938 STK26Q9P289 416 aa28.75■■■□□ 2.19
CHKB-201ENST00000406938 ABCC11Q96J66 1382 aa28.7■■■□□ 2.19
CHKB-201ENST00000406938 KNDC1Q76NI1 1749 aa28.7■■■□□ 2.19
CHKB-201ENST00000406938 DLC1Q96QB1 1528 aa28.7■■■□□ 2.18
CHKB-201ENST00000406938 TECPR2O15040 1411 aa28.69■■■□□ 2.18
CHKB-201ENST00000406938 PTPRUQ92729 1446 aa28.69■■■□□ 2.18
CHKB-201ENST00000406938 TESK2Q96S53 571 aa28.69■■■□□ 2.18
CHKB-201ENST00000406938 CENPJQ9HC77 1338 aaPredicted RBP28.68■■■□□ 2.18
CHKB-201ENST00000406938 CPS1P31327 1500 aa28.67■■■□□ 2.18
CHKB-201ENST00000406938 PIK3R4Q99570 1358 aa28.67■■■□□ 2.18
CHKB-201ENST00000406938 STRCQ7RTU9 1775 aa28.67■■■□□ 2.18
CHKB-201ENST00000406938 QRICH2Q9H0J4 1663 aa28.66■■■□□ 2.18
CHKB-201ENST00000406938 XRN1Q8IZH2 1706 aaKnown RBP28.64■■■□□ 2.17
CHKB-201ENST00000406938 C11orf95C9JLR9 678 aaPredicted RBP28.63■■■□□ 2.17
CHKB-201ENST00000406938 PRAM1Q96QH2 718 aa28.63■■■□□ 2.17
CHKB-201ENST00000406938 SBNO2Q9Y2G9 1366 aa28.63■■■□□ 2.17
CHKB-201ENST00000406938 WASHC2AQ641Q2 1341 aa28.61■■■□□ 2.17
CHKB-201ENST00000406938 AMOTL2Q9Y2J4 779 aa28.61■■■□□ 2.17
CHKB-201ENST00000406938 FAM135BQ49AJ0 1406 aa28.6■■■□□ 2.17
CHKB-201ENST00000406938 ROBO2Q9HCK4 1378 aa28.6■■■□□ 2.17
CHKB-201ENST00000406938 DISP3Q9P2K9 1392 aa28.6■■■□□ 2.17
CHKB-201ENST00000406938 PTCH1Q13635 1447 aa28.59■■■□□ 2.17
CHKB-201ENST00000406938 POGKQ9P215 609 aa28.59■■■□□ 2.17
CHKB-201ENST00000406938 CCDC7Q96M83 1385 aa28.59■■■□□ 2.17
CHKB-201ENST00000406938 PLEKHH1Q9ULM0 1364 aa28.59■■■□□ 2.17
CHKB-201ENST00000406938 KIF7Q2M1P5 1343 aa28.58■■■□□ 2.17
CHKB-201ENST00000406938 SAFB2Q14151 953 aaKnown RBP eCLIP28.58■■■□□ 2.17
CHKB-201ENST00000406938 CHD2O14647 1828 aaKnown RBP28.58■■■□□ 2.17
CHKB-201ENST00000406938 TMF1P82094 1093 aa28.57■■■□□ 2.16
CHKB-201ENST00000406938 WAPLQ7Z5K2 1190 aa28.57■■■□□ 2.16
CHKB-201ENST00000406938 SIRT1Q96EB6 747 aa28.57■■■□□ 2.16
CHKB-201ENST00000406938 NWD1Q149M9 1564 aa28.55■■■□□ 2.16
CHKB-201ENST00000406938 KCNA6P17658 529 aa28.54■■■□□ 2.16
CHKB-201ENST00000406938 SLC24A1O60721 1099 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms