RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 STAG3Q9UJ98 1225 aa17.38■□□□□ 0.37
HMGA2-204ENST00000403681 TPM2P07951 284 aa17.38■□□□□ 0.37
HMGA2-204ENST00000403681 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.38■□□□□ 0.37
HMGA2-204ENST00000403681 NASPP49321 788 aaPredicted RBP17.37■□□□□ 0.37
HMGA2-204ENST00000403681 KIAA2012Q0VF49 1180 aa17.37■□□□□ 0.37
HMGA2-204ENST00000403681 LNPKQ9C0E8 428 aa17.37■□□□□ 0.37
HMGA2-204ENST00000403681 ISY1Q9ULR0 285 aaKnown RBP17.37■□□□□ 0.37
HMGA2-204ENST00000403681 ERBINQ96RT1 1412 aa17.37■□□□□ 0.37
HMGA2-204ENST00000403681 PLEKHH2Q8IVE3 1493 aa17.37■□□□□ 0.37
HMGA2-204ENST00000403681 SAFB2Q14151 953 aaKnown RBP eCLIP17.37■□□□□ 0.37
HMGA2-204ENST00000403681 KANK1Q14678 1352 aa17.37■□□□□ 0.37
HMGA2-204ENST00000403681 IGHDP01880 384 aa17.36■□□□□ 0.37
HMGA2-204ENST00000403681 PRG4Q92954 1404 aaPredicted RBP17.36■□□□□ 0.37
HMGA2-204ENST00000403681 TCP11L2Q8N4U5 519 aa17.36■□□□□ 0.37
HMGA2-204ENST00000403681 UGGT2Q9NYU1 1516 aa17.35■□□□□ 0.37
HMGA2-204ENST00000403681 CHAF1AQ13111 956 aaPredicted RBP17.35■□□□□ 0.37
HMGA2-204ENST00000403681 SRPK2P78362 688 aaKnown RBP17.34■□□□□ 0.37
HMGA2-204ENST00000403681 PRDM2Q13029 1718 aa17.34■□□□□ 0.37
HMGA2-204ENST00000403681 XRCC6P12956 609 aaKnown RBP eCLIP17.34■□□□□ 0.37
HMGA2-204ENST00000403681 GRIN2BQ13224 1484 aa17.34■□□□□ 0.37
HMGA2-204ENST00000403681 R3HCC1Q9Y3T6 440 aaKnown RBP17.33■□□□□ 0.37
HMGA2-204ENST00000403681 PARD3Q8TEW0 1356 aa17.33■□□□□ 0.36
HMGA2-204ENST00000403681 TRAK1Q9UPV9 953 aa17.33■□□□□ 0.36
HMGA2-204ENST00000403681 NINLQ9Y2I6 1382 aa17.32■□□□□ 0.36
HMGA2-204ENST00000403681 FOXD4L5Q5VV16 416 aaPredicted RBP17.32■□□□□ 0.36
HMGA2-204ENST00000403681 FOXD4L4Q8WXT5 416 aaPredicted RBP17.32■□□□□ 0.36
HMGA2-204ENST00000403681 C9orf84Q5VXU9 1444 aa17.32■□□□□ 0.36
HMGA2-204ENST00000403681 EFCAB2Q5VUJ9 269 aa17.32■□□□□ 0.36
HMGA2-204ENST00000403681 SPATA31E1Q6ZUB1 1445 aa17.32■□□□□ 0.36
HMGA2-204ENST00000403681 SYAP1Q96A49 352 aaPredicted RBP17.31■□□□□ 0.36
HMGA2-204ENST00000403681 TROQ12816 1431 aaPredicted RBP17.31■□□□□ 0.36
HMGA2-204ENST00000403681 SNAPC4Q5SXM2 1469 aa17.31■□□□□ 0.36
HMGA2-204ENST00000403681 ST18O60284 1047 aa17.31■□□□□ 0.36
HMGA2-204ENST00000403681 PANK2Q9BZ23 570 aa17.31■□□□□ 0.36
HMGA2-204ENST00000403681 MRC2Q9UBG0 1479 aa17.3■□□□□ 0.36
HMGA2-204ENST00000403681 KIAA1211Q6ZU35 1233 aa17.3■□□□□ 0.36
HMGA2-204ENST00000403681 CLCN1P35523 988 aa17.3■□□□□ 0.36
HMGA2-204ENST00000403681 RRAGDQ9NQL2 400 aaPredicted RBP17.3■□□□□ 0.36
HMGA2-204ENST00000403681 MCCP23508 829 aa17.3■□□□□ 0.36
HMGA2-204ENST00000403681 CCDC173Q0VFZ6 552 aa17.3■□□□□ 0.36
HMGA2-204ENST00000403681 RBM10P98175 930 aaKnown RBP17.29■□□□□ 0.36
HMGA2-204ENST00000403681 MCTP1Q6DN14 999 aa17.29■□□□□ 0.36
HMGA2-204ENST00000403681 KDM2BQ8NHM5 1336 aa17.29■□□□□ 0.36
HMGA2-204ENST00000403681 TBC1D32Q96NH3 1257 aa17.29■□□□□ 0.36
HMGA2-204ENST00000403681 ZMYND15Q9H091 742 aa17.29■□□□□ 0.36
HMGA2-204ENST00000403681 WWC1Q8IX03 1113 aa17.29■□□□□ 0.36
HMGA2-204ENST00000403681 CUL7Q14999 1698 aa17.29■□□□□ 0.36
HMGA2-204ENST00000403681 NKTRP30414 1462 aaKnown RBP17.28■□□□□ 0.36
HMGA2-204ENST00000403681 TEX14Q8IWB6 1497 aa17.28■□□□□ 0.36
HMGA2-204ENST00000403681 TCOF1Q13428 1488 aaKnown RBP17.27■□□□□ 0.36
HMGA2-204ENST00000403681 RALGAPBQ86X10 1494 aa17.27■□□□□ 0.36
HMGA2-204ENST00000403681 KIF3BO15066 747 aa17.27■□□□□ 0.36
HMGA2-204ENST00000403681 SEC24BO95487 1268 aa17.27■□□□□ 0.36
HMGA2-204ENST00000403681 NUCB2P80303 420 aa17.27■□□□□ 0.35
HMGA2-204ENST00000403681 MVPQ14764 893 aaKnown RBP17.26■□□□□ 0.35
HMGA2-204ENST00000403681 CSPP1Q1MSJ5 1256 aa17.26■□□□□ 0.35
HMGA2-204ENST00000403681 MAP7D2Q96T17 732 aa17.26■□□□□ 0.35
HMGA2-204ENST00000403681 ELL2O00472 640 aaPredicted RBP17.26■□□□□ 0.35
HMGA2-204ENST00000403681 MTHFSP49914 203 aa17.25■□□□□ 0.35
HMGA2-204ENST00000403681 PER1O15534 1290 aaPredicted RBP17.25■□□□□ 0.35
HMGA2-204ENST00000403681 DISP3Q9P2K9 1392 aa17.25■□□□□ 0.35
HMGA2-204ENST00000403681 CAVIN1Q6NZI2 390 aaKnown RBP17.25■□□□□ 0.35
HMGA2-204ENST00000403681 STK26Q9P289 416 aa17.25■□□□□ 0.35
HMGA2-204ENST00000403681 ZNF608Q9ULD9 1512 aaPredicted RBP17.25■□□□□ 0.35
HMGA2-204ENST00000403681 RARSP54136 660 aaKnown RBP17.24■□□□□ 0.35
HMGA2-204ENST00000403681 CIZ1Q9ULV3 898 aaPredicted RBP17.24■□□□□ 0.35
HMGA2-204ENST00000403681 NOL8Q76FK4 1167 aaKnown RBP17.24■□□□□ 0.35
HMGA2-204ENST00000403681 SPAG9O60271 1321 aaKnown RBP17.24■□□□□ 0.35
HMGA2-204ENST00000403681 STAC3Q96MF2 364 aa17.24■□□□□ 0.35
HMGA2-204ENST00000403681 CAMSAP2Q08AD1 1489 aa17.23■□□□□ 0.35
HMGA2-204ENST00000403681 EXOSC9Q06265 439 aaKnown RBP17.23■□□□□ 0.35
HMGA2-204ENST00000403681 WDR63Q8IWG1 891 aa17.22■□□□□ 0.35
HMGA2-204ENST00000403681 KIF16BQ96L93 1317 aa17.22■□□□□ 0.35
HMGA2-204ENST00000403681 PLEKHH1Q9ULM0 1364 aa17.22■□□□□ 0.35
HMGA2-204ENST00000403681 THOC2Q8NI27 1593 aaKnown RBP17.22■□□□□ 0.35
HMGA2-204ENST00000403681 ZSCAN30Q86W11 494 aa17.22■□□□□ 0.35
HMGA2-204ENST00000403681 TSR2Q969E8 191 aaKnown RBP17.21■□□□□ 0.35
HMGA2-204ENST00000403681 RIPK4P57078 832 aa17.21■□□□□ 0.35
HMGA2-204ENST00000403681 FOXD4L6Q3SYB3 417 aaPredicted RBP17.21■□□□□ 0.35
HMGA2-204ENST00000403681 FOXD4L3Q6VB84 417 aaPredicted RBP17.21■□□□□ 0.35
HMGA2-204ENST00000403681 CFAP70Q5T0N1 1121 aa17.2■□□□□ 0.34
HMGA2-204ENST00000403681 PHF14O94880 888 aa17.2■□□□□ 0.34
HMGA2-204ENST00000403681 HAP1P54257 671 aaPredicted RBP17.2■□□□□ 0.34
HMGA2-204ENST00000403681 K7ELQ4 463 aaPredicted RBP17.19■□□□□ 0.34
HMGA2-204ENST00000403681 HDGFL2Q7Z4V5 671 aaPredicted RBP17.19■□□□□ 0.34
HMGA2-204ENST00000403681 DRC7Q8IY82 874 aa17.19■□□□□ 0.34
HMGA2-204ENST00000403681 CDK11BP21127 795 aaKnown RBP17.19■□□□□ 0.34
HMGA2-204ENST00000403681 PCDHB15Q9Y5E8 787 aa17.19■□□□□ 0.34
HMGA2-204ENST00000403681 RNF214Q8ND24 703 aa17.19■□□□□ 0.34
HMGA2-204ENST00000403681 TNPO1Q92973 898 aaKnown RBP17.19■□□□□ 0.34
HMGA2-204ENST00000403681 MTERF4Q7Z6M4 381 aaKnown RBP17.18■□□□□ 0.34
HMGA2-204ENST00000403681 GOLGA6L4A6NEF3 574 aa17.17■□□□□ 0.34
HMGA2-204ENST00000403681 CDC45O75419 566 aa17.17■□□□□ 0.34
HMGA2-204ENST00000403681 PDCL3Q9H2J4 239 aa17.17■□□□□ 0.34
HMGA2-204ENST00000403681 IFT140Q96RY7 1462 aa17.17■□□□□ 0.34
HMGA2-204ENST00000403681 ATF7IPQ6VMQ6 1270 aa17.17■□□□□ 0.34
HMGA2-204ENST00000403681 NOB1Q9ULX3 412 aaKnown RBP17.17■□□□□ 0.34
HMGA2-204ENST00000403681 GGT6Q6P531 493 aa17.17■□□□□ 0.34
HMGA2-204ENST00000403681 TERF2IPQ9NYB0 399 aa17.17■□□□□ 0.34
HMGA2-204ENST00000403681 PRPF40AO75400 957 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms