RNA–Protein interactions for RNA: ENST00000399848.7

LDLRAD4-203, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-203ENST00000399848 NOL10Q9BSC4 688 aaKnown RBP16.35■□□□□ 0.21
LDLRAD4-203ENST00000399848 ARGLU1Q9NWB6 273 aaPredicted RBP16.35■□□□□ 0.21
LDLRAD4-203ENST00000399848 ZKSCAN2Q63HK3 967 aa16.34■□□□□ 0.21
LDLRAD4-203ENST00000399848 CCAR1Q8IX12 1150 aaKnown RBP16.34■□□□□ 0.21
LDLRAD4-203ENST00000399848 RNF20Q5VTR2 975 aa16.34■□□□□ 0.21
LDLRAD4-203ENST00000399848 PDE4AP27815 886 aa16.34■□□□□ 0.21
LDLRAD4-203ENST00000399848 NEXNQ0ZGT2 675 aa16.34■□□□□ 0.21
LDLRAD4-203ENST00000399848 EFCAB2Q5VUJ9 269 aa16.33■□□□□ 0.21
LDLRAD4-203ENST00000399848 VSIG10Q8N0Z9 540 aa16.33■□□□□ 0.21
LDLRAD4-203ENST00000399848 CPLX1O14810 134 aa16.32■□□□□ 0.2
LDLRAD4-203ENST00000399848 ZBED9Q6R2W3 1325 aa16.32■□□□□ 0.2
LDLRAD4-203ENST00000399848 FOXD4L6Q3SYB3 417 aaPredicted RBP16.32■□□□□ 0.2
LDLRAD4-203ENST00000399848 RSPH4AQ5TD94 716 aa16.32■□□□□ 0.2
LDLRAD4-203ENST00000399848 FOXD4L3Q6VB84 417 aaPredicted RBP16.32■□□□□ 0.2
LDLRAD4-203ENST00000399848 C1orf141Q5JVX7 400 aa16.32■□□□□ 0.2
LDLRAD4-203ENST00000399848 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.31■□□□□ 0.21e-6■■■□□ 18.7
LDLRAD4-203ENST00000399848 ABCC8Q09428 1581 aa16.31■□□□□ 0.2
LDLRAD4-203ENST00000399848 HSP90B2PQ58FF3 399 aa16.31■□□□□ 0.2
LDLRAD4-203ENST00000399848 TRDNQ13061 729 aa16.3■□□□□ 0.2
LDLRAD4-203ENST00000399848 MTERF4Q7Z6M4 381 aaKnown RBP16.3■□□□□ 0.2
LDLRAD4-203ENST00000399848 SASS6Q6UVJ0 657 aa16.3■□□□□ 0.2
LDLRAD4-203ENST00000399848 BICD2Q8TD16 824 aa16.3■□□□□ 0.2
LDLRAD4-203ENST00000399848 DDX19BQ9UMR2 479 aa16.3■□□□□ 0.2
LDLRAD4-203ENST00000399848 SOGA1O94964 1423 aa16.3■□□□□ 0.2
LDLRAD4-203ENST00000399848 CCDC144AA2RUR9 1427 aa16.29■□□□□ 0.2
LDLRAD4-203ENST00000399848 C9orf78Q9NZ63 289 aaPredicted RBP16.29■□□□□ 0.2
LDLRAD4-203ENST00000399848 ATF3P18847 181 aa16.29■□□□□ 0.2
LDLRAD4-203ENST00000399848 SMARCA2P51531 1590 aa16.29■□□□□ 0.2
LDLRAD4-203ENST00000399848 RRP1P56182 461 aaKnown RBP16.29■□□□□ 0.2
LDLRAD4-203ENST00000399848 NAT10Q9H0A0 1025 aaKnown RBP16.29■□□□□ 0.2
LDLRAD4-203ENST00000399848 WDHD1O75717 1129 aaPredicted RBP16.28■□□□□ 0.2
LDLRAD4-203ENST00000399848 NUCB2P80303 420 aa16.28■□□□□ 0.2
LDLRAD4-203ENST00000399848 FAM13BQ9NYF5 915 aa16.28■□□□□ 0.2
LDLRAD4-203ENST00000399848 NGEFQ8N5V2 710 aa16.28■□□□□ 0.2
LDLRAD4-203ENST00000399848 ANO2Q9NQ90 1003 aa16.27■□□□□ 0.2
LDLRAD4-203ENST00000399848 DCTN1Q14203 1278 aa16.27■□□□□ 0.2
LDLRAD4-203ENST00000399848 FAM43AQ8N2R8 423 aa16.27■□□□□ 0.19
LDLRAD4-203ENST00000399848 CYB5RLQ6IPT4 315 aa16.27■□□□□ 0.19
LDLRAD4-203ENST00000399848 PPP1R1BQ9UD71 204 aaPredicted RBP16.27■□□□□ 0.19
LDLRAD4-203ENST00000399848 ERICH2A1L162 156 aa16.26■□□□□ 0.19
LDLRAD4-203ENST00000399848 CWC15Q9P013 229 aaKnown RBP16.26■□□□□ 0.19
LDLRAD4-203ENST00000399848 LTV1Q96GA3 475 aaPredicted RBP16.26■□□□□ 0.19
LDLRAD4-203ENST00000399848 CHMP5Q9NZZ3 219 aa16.26■□□□□ 0.19
LDLRAD4-203ENST00000399848 CCDC43Q96MW1 224 aaKnown RBP16.26■□□□□ 0.19
LDLRAD4-203ENST00000399848 ODF2Q5BJF6 829 aa16.26■□□□□ 0.19
LDLRAD4-203ENST00000399848 CCDC173Q0VFZ6 552 aa16.26■□□□□ 0.19
LDLRAD4-203ENST00000399848 L3MBTL2Q969R5 705 aa16.26■□□□□ 0.19
LDLRAD4-203ENST00000399848 MYO6Q9UM54 1294 aa16.26■□□□□ 0.19
LDLRAD4-203ENST00000399848 APPP05067 770 aa16.25■□□□□ 0.19
LDLRAD4-203ENST00000399848 MNS1Q8NEH6 495 aa16.25■□□□□ 0.19
LDLRAD4-203ENST00000399848 RDXP35241 583 aaKnown RBP16.25■□□□□ 0.19
LDLRAD4-203ENST00000399848 CT47A1Q5JQC4 288 aaPredicted RBP16.25■□□□□ 0.19
LDLRAD4-203ENST00000399848 IFIT2P09913 472 aaKnown RBP16.25■□□□□ 0.19
LDLRAD4-203ENST00000399848 WASHC2CQ9Y4E1 1318 aa16.25■□□□□ 0.19
LDLRAD4-203ENST00000399848 SAFBQ15424 915 aaKnown RBP eCLIP16.25■□□□□ 0.19
LDLRAD4-203ENST00000399848 FANCIQ9NVI1 1328 aa16.25■□□□□ 0.19
LDLRAD4-203ENST00000399848 WWC1Q8IX03 1113 aa16.25■□□□□ 0.19
LDLRAD4-203ENST00000399848 COG3Q96JB2 828 aa16.25■□□□□ 0.19
LDLRAD4-203ENST00000399848 EVC2Q86UK5 1308 aa16.24■□□□□ 0.19
LDLRAD4-203ENST00000399848 KIF3BO15066 747 aa16.24■□□□□ 0.19
LDLRAD4-203ENST00000399848 TEFQ10587 303 aa16.24■□□□□ 0.19
LDLRAD4-203ENST00000399848 VPS37DQ86XT2 251 aa16.24■□□□□ 0.19
LDLRAD4-203ENST00000399848 IFT57Q9NWB7 429 aa16.24■□□□□ 0.19
LDLRAD4-203ENST00000399848 PRDM2Q13029 1718 aa16.24■□□□□ 0.19
LDLRAD4-203ENST00000399848 RRP7AQ9Y3A4 280 aaKnown RBP16.24■□□□□ 0.19
LDLRAD4-203ENST00000399848 INTS3Q68E01 1043 aaKnown RBP16.24■□□□□ 0.19
LDLRAD4-203ENST00000399848 NAP1L1P55209 391 aaKnown RBP16.24■□□□□ 0.19
LDLRAD4-203ENST00000399848 CCDC191Q8NCU4 936 aa16.23■□□□□ 0.19
LDLRAD4-203ENST00000399848 MAP7D2Q96T17 732 aa16.23■□□□□ 0.19
LDLRAD4-203ENST00000399848 CCDC73Q6ZRK6 1079 aa16.23■□□□□ 0.19
LDLRAD4-203ENST00000399848 TTC5Q8N0Z6 440 aa16.23■□□□□ 0.19
LDLRAD4-203ENST00000399848 EPS15P42566 896 aa16.23■□□□□ 0.19
LDLRAD4-203ENST00000399848 SMC3Q9UQE7 1217 aa16.23■□□□□ 0.19
LDLRAD4-203ENST00000399848 DDX58O95786 925 aaKnown RBP16.22■□□□□ 0.19
LDLRAD4-203ENST00000399848 NFXL1Q6ZNB6 911 aa16.22■□□□□ 0.19
LDLRAD4-203ENST00000399848 BCL2L13Q9BXK5 485 aa16.21■□□□□ 0.19
LDLRAD4-203ENST00000399848 CECR2Q9BXF3 1484 aa16.21■□□□□ 0.19
LDLRAD4-203ENST00000399848 ERCC4Q92889 916 aaPredicted RBP16.21■□□□□ 0.19
LDLRAD4-203ENST00000399848 OLFM4Q6UX06 510 aa16.21■□□□□ 0.19
LDLRAD4-203ENST00000399848 CRBNQ96SW2 442 aa16.21■□□□□ 0.19
LDLRAD4-203ENST00000399848 AAMPQ13685 434 aa16.21■□□□□ 0.19
LDLRAD4-203ENST00000399848 PANK3Q9H999 370 aa16.21■□□□□ 0.19
LDLRAD4-203ENST00000399848 KANK4Q5T7N3 995 aaPredicted RBP16.21■□□□□ 0.18
LDLRAD4-203ENST00000399848 ERC2O15083 957 aa16.2■□□□□ 0.18
LDLRAD4-203ENST00000399848 RAD21O60216 631 aa16.2■□□□□ 0.18
LDLRAD4-203ENST00000399848 BRMS1Q9HCU9 246 aa16.2■□□□□ 0.18
LDLRAD4-203ENST00000399848 DHX16O60231 1041 aaKnown RBP16.19■□□□□ 0.18
LDLRAD4-203ENST00000399848 CCDC39Q9UFE4 941 aa16.19■□□□□ 0.18
LDLRAD4-203ENST00000399848 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.19■□□□□ 0.18
LDLRAD4-203ENST00000399848 VPS37CA5D8V6 355 aaPredicted RBP16.19■□□□□ 0.18
LDLRAD4-203ENST00000399848 SLC4A3P48751 1232 aa16.19■□□□□ 0.18
LDLRAD4-203ENST00000399848 API5Q9BZZ5 524 aaKnown RBP16.19■□□□□ 0.18
LDLRAD4-203ENST00000399848 G3BP1Q13283 466 aaKnown RBP eCLIP16.18■□□□□ 0.18
LDLRAD4-203ENST00000399848 HSP90AB4PQ58FF6 505 aa16.18■□□□□ 0.18
LDLRAD4-203ENST00000399848 NINLQ9Y2I6 1382 aa16.18■□□□□ 0.18
LDLRAD4-203ENST00000399848 USP47Q96K76 1375 aa16.18■□□□□ 0.18
LDLRAD4-203ENST00000399848 FBXO3Q9UK99 471 aa16.18■□□□□ 0.18
LDLRAD4-203ENST00000399848 LETM1O95202 739 aaPredicted RBP16.18■□□□□ 0.18
LDLRAD4-203ENST00000399848 COG6Q9Y2V7 657 aa16.18■□□□□ 0.18
LDLRAD4-203ENST00000399848 H0YHG0 523 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms