RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 REC8O95072 547 aa14.15□□□□□ -0.14
HLCS-202ENST00000399120 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.15□□□□□ -0.14
HLCS-202ENST00000399120 VPS37DQ86XT2 251 aa14.15□□□□□ -0.14
HLCS-202ENST00000399120 TSHZ2Q9NRE2 1034 aa14.15□□□□□ -0.14
HLCS-202ENST00000399120 PHLDB1Q86UU1 1377 aa14.15□□□□□ -0.15
HLCS-202ENST00000399120 FBXW7Q969H0 707 aa14.14□□□□□ -0.15
HLCS-202ENST00000399120 EPS15P42566 896 aa14.14□□□□□ -0.15
HLCS-202ENST00000399120 RNF20Q5VTR2 975 aa14.13□□□□□ -0.15
HLCS-202ENST00000399120 H0YHG0 523 aa14.13□□□□□ -0.15
HLCS-202ENST00000399120 NLRP13Q86W25 1043 aa14.13□□□□□ -0.15
HLCS-202ENST00000399120 IFT57Q9NWB7 429 aa14.13□□□□□ -0.15
HLCS-202ENST00000399120 IFIT2P09913 472 aaKnown RBP14.13□□□□□ -0.15
HLCS-202ENST00000399120 OFD1O75665 1012 aa14.12□□□□□ -0.15
HLCS-202ENST00000399120 MYO6Q9UM54 1294 aa14.12□□□□□ -0.15
HLCS-202ENST00000399120 SLC4A3P48751 1232 aa14.12□□□□□ -0.15
HLCS-202ENST00000399120 C9orf78Q9NZ63 289 aaPredicted RBP14.12□□□□□ -0.15
HLCS-202ENST00000399120 SAFBQ15424 915 aaKnown RBP eCLIP14.12□□□□□ -0.15
HLCS-202ENST00000399120 EVA1CP58658 441 aa14.12□□□□□ -0.15
HLCS-202ENST00000399120 CAGE1Q8TC20 777 aa14.12□□□□□ -0.15
HLCS-202ENST00000399120 NGEFQ8N5V2 710 aa14.11□□□□□ -0.15
HLCS-202ENST00000399120 RRP7AQ9Y3A4 280 aaKnown RBP14.11□□□□□ -0.15
HLCS-202ENST00000399120 ELL2O00472 640 aaPredicted RBP14.11□□□□□ -0.15
HLCS-202ENST00000399120 TTC5Q8N0Z6 440 aa14.11□□□□□ -0.15
HLCS-202ENST00000399120 ARHGAP35Q9NRY4 1499 aa14.11□□□□□ -0.15
HLCS-202ENST00000399120 ZKSCAN2Q63HK3 967 aa14.11□□□□□ -0.15
HLCS-202ENST00000399120 CCDC73Q6ZRK6 1079 aa14.11□□□□□ -0.15
HLCS-202ENST00000399120 ERCC4Q92889 916 aaPredicted RBP14.1□□□□□ -0.15
HLCS-202ENST00000399120 CWC15Q9P013 229 aaKnown RBP14.1□□□□□ -0.15
HLCS-202ENST00000399120 VPS37CA5D8V6 355 aaPredicted RBP14.1□□□□□ -0.15
HLCS-202ENST00000399120 TEFQ10587 303 aa14.1□□□□□ -0.15
HLCS-202ENST00000399120 NUP155O75694 1391 aa14.1□□□□□ -0.15
HLCS-202ENST00000399120 PDE4AP27815 886 aa14.09□□□□□ -0.15
HLCS-202ENST00000399120 SAMD1Q6SPF0 538 aaPredicted RBP14.09□□□□□ -0.15
HLCS-202ENST00000399120 SMC3Q9UQE7 1217 aa14.09□□□□□ -0.15
HLCS-202ENST00000399120 OLFM4Q6UX06 510 aa14.09□□□□□ -0.15
HLCS-202ENST00000399120 NUTM2FA1L443 756 aa14.09□□□□□ -0.15
HLCS-202ENST00000399120 CGNL1Q0VF96 1302 aa14.09□□□□□ -0.15
HLCS-202ENST00000399120 PAF1Q8N7H5 531 aa14.08□□□□□ -0.15
HLCS-202ENST00000399120 BCL2L13Q9BXK5 485 aa14.08□□□□□ -0.15
HLCS-202ENST00000399120 FOSBP53539 338 aa14.08□□□□□ -0.16
HLCS-202ENST00000399120 MPHOSPH9Q99550 1183 aa14.08□□□□□ -0.16
HLCS-202ENST00000399120 ZRSR2Q15696 482 aaKnown RBP14.08□□□□□ -0.16
HLCS-202ENST00000399120 PDILTQ8N807 584 aa14.08□□□□□ -0.16
HLCS-202ENST00000399120 EIF2S2P20042 333 aaKnown RBP14.07□□□□□ -0.16
HLCS-202ENST00000399120 FAM43AQ8N2R8 423 aa14.07□□□□□ -0.16
HLCS-202ENST00000399120 NUTM2DQ5VT03 806 aaPredicted RBP14.07□□□□□ -0.16
HLCS-202ENST00000399120 NAT10Q9H0A0 1025 aaKnown RBP14.07□□□□□ -0.16
HLCS-202ENST00000399120 BRMS1Q9HCU9 246 aa14.07□□□□□ -0.16
HLCS-202ENST00000399120 PLCD4Q9BRC7 762 aa14.06□□□□□ -0.16
HLCS-202ENST00000399120 CHMP5Q9NZZ3 219 aa14.06□□□□□ -0.16
HLCS-202ENST00000399120 G3BP1Q13283 466 aaKnown RBP eCLIP14.06□□□□□ -0.16
HLCS-202ENST00000399120 SKIDA1Q1XH10 827 aa14.06□□□□□ -0.16
HLCS-202ENST00000399120 DDX58O95786 925 aaKnown RBP14.05□□□□□ -0.16
HLCS-202ENST00000399120 COG3Q96JB2 828 aa14.05□□□□□ -0.16
HLCS-202ENST00000399120 E9PSI1 815 aa14.05□□□□□ -0.16
HLCS-202ENST00000399120 ANKRD30AQ9BXX3 1397 aa14.04□□□□□ -0.16
HLCS-202ENST00000399120 NUCB2P80303 420 aa14.04□□□□□ -0.16
HLCS-202ENST00000399120 BCL11BQ9C0K0 894 aaPredicted RBP14.04□□□□□ -0.16
HLCS-202ENST00000399120 KIF15Q9NS87 1388 aa14.04□□□□□ -0.16
HLCS-202ENST00000399120 WWC2Q6AWC2 1192 aa14.04□□□□□ -0.16
HLCS-202ENST00000399120 TTLL5Q6EMB2 1281 aa14.04□□□□□ -0.16
HLCS-202ENST00000399120 NEFHP12036 1026 aa14.04□□□□□ -0.16
HLCS-202ENST00000399120 TSPYL1Q9H0U9 437 aa14.04□□□□□ -0.16
HLCS-202ENST00000399120 EFCAB2Q5VUJ9 269 aa14.03□□□□□ -0.16
HLCS-202ENST00000399120 RALYLQ86SE5 291 aaKnown RBP14.03□□□□□ -0.16
HLCS-202ENST00000399120 KIF3BO15066 747 aa14.03□□□□□ -0.16
HLCS-202ENST00000399120 XBP1P17861 261 aa14.03□□□□□ -0.16
HLCS-202ENST00000399120 TMEM132AQ24JP5 1023 aa14.03□□□□□ -0.16
HLCS-202ENST00000399120 ROCK1Q13464 1354 aa14.03□□□□□ -0.16
HLCS-202ENST00000399120 RBM33Q96EV2 1170 aaKnown RBP14.03□□□□□ -0.16
HLCS-202ENST00000399120 INTS3Q68E01 1043 aaKnown RBP14.02□□□□□ -0.16
HLCS-202ENST00000399120 DDX19BQ9UMR2 479 aa14.02□□□□□ -0.16
HLCS-202ENST00000399120 MYBBP1AQ9BQG0 1328 aaKnown RBP14.02□□□□□ -0.16
HLCS-202ENST00000399120 BAZ1BQ9UIG0 1483 aaKnown RBP14.02□□□□□ -0.17
HLCS-202ENST00000399120 CRBNQ96SW2 442 aa14.02□□□□□ -0.17
HLCS-202ENST00000399120 CCDC39Q9UFE4 941 aa14.02□□□□□ -0.17
HLCS-202ENST00000399120 COG6Q9Y2V7 657 aa14.02□□□□□ -0.17
HLCS-202ENST00000399120 PLIN1O60240 522 aa14.01□□□□□ -0.17
HLCS-202ENST00000399120 TRAK1Q9UPV9 953 aa14.01□□□□□ -0.17
HLCS-202ENST00000399120 CCDC66A2RUB6 948 aa14.01□□□□□ -0.17
HLCS-202ENST00000399120 ERC2O15083 957 aa14□□□□□ -0.17
HLCS-202ENST00000399120 SYCP1Q15431 976 aa14□□□□□ -0.17
HLCS-202ENST00000399120 SMARCE1Q969G3 411 aa14□□□□□ -0.17
HLCS-202ENST00000399120 MYO15BQ96JP2 1530 aa14□□□□□ -0.17
HLCS-202ENST00000399120 NECTIN2Q92692 538 aa14□□□□□ -0.17
HLCS-202ENST00000399120 FYB1O15117 783 aa14□□□□□ -0.17
HLCS-202ENST00000399120 SYTL4Q96C24 671 aaPredicted RBP14□□□□□ -0.17
HLCS-202ENST00000399120 MTERF4Q7Z6M4 381 aaKnown RBP14□□□□□ -0.17
HLCS-202ENST00000399120 API5Q9BZZ5 524 aaKnown RBP14□□□□□ -0.17
HLCS-202ENST00000399120 LEKR1Q6ZMV7 388 aa14□□□□□ -0.17
HLCS-202ENST00000399120 WASHC2CQ9Y4E1 1318 aa14□□□□□ -0.17
HLCS-202ENST00000399120 RRP1P56182 461 aaKnown RBP13.99□□□□□ -0.17
HLCS-202ENST00000399120 ANKRD18AQ8IVF6 992 aa13.99□□□□□ -0.17
HLCS-202ENST00000399120 ERLIN2O94905 339 aa13.99□□□□□ -0.17
HLCS-202ENST00000399120 HSP90AB3PQ58FF7 597 aa13.99□□□□□ -0.17
HLCS-202ENST00000399120 AXDND1Q5T1B0 1012 aaPredicted RBP13.99□□□□□ -0.17
HLCS-202ENST00000399120 SDF4Q9BRK5 362 aa13.99□□□□□ -0.17
HLCS-202ENST00000399120 CCDC27Q2M243 656 aa13.99□□□□□ -0.17
HLCS-202ENST00000399120 HSP90AB4PQ58FF6 505 aa13.99□□□□□ -0.17
HLCS-202ENST00000399120 IKQ13123 557 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms