RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 ERVK-7P63135 1459 aa32.31■■■□□ 2.76
CDH23-206ENST00000398842 SLC52A1Q9NWF4 448 aa32.31■■■□□ 2.76
CDH23-206ENST00000398842 ADGRF5Q8IZF2 1346 aa32.3■■■□□ 2.76
CDH23-206ENST00000398842 ANP32CO43423 234 aa32.3■■■□□ 2.76
CDH23-206ENST00000398842 RPGRIP1LQ68CZ1 1315 aa32.29■■■□□ 2.76
CDH23-206ENST00000398842 IDI1Q13907 227 aa32.28■■■□□ 2.76
CDH23-206ENST00000398842 FBXO31Q5XUX0 539 aaPredicted RBP32.25■■■□□ 2.75
CDH23-206ENST00000398842 SPATA31D1Q6ZQQ2 1576 aa32.24■■■□□ 2.75
CDH23-206ENST00000398842 TMEM131LA2VDJ0 1609 aa32.24■■■□□ 2.75
CDH23-206ENST00000398842 NEXMIFQ5QGS0 1516 aa32.23■■■□□ 2.75
CDH23-206ENST00000398842 MYO5BQ9ULV0 1848 aa32.23■■■□□ 2.75
CDH23-206ENST00000398842 SCAF11Q99590 1463 aaKnown RBP32.22■■■□□ 2.75
CDH23-206ENST00000398842 PIK3C2GO75747 1445 aa32.2■■■□□ 2.75
CDH23-206ENST00000398842 TESK2Q96S53 571 aa32.19■■■□□ 2.74
CDH23-206ENST00000398842 CFAP70Q5T0N1 1121 aa32.19■■■□□ 2.74
CDH23-206ENST00000398842 CCER2I3L3R5 266 aa32.17■■■□□ 2.74
CDH23-206ENST00000398842 YTHDC1Q96MU7 727 aaKnown RBP32.17■■■□□ 2.74
CDH23-206ENST00000398842 SETBP1Q9Y6X0 1596 aa32.16■■■□□ 2.74
CDH23-206ENST00000398842 ZMYM3Q14202 1370 aa32.13■■■□□ 2.73
CDH23-206ENST00000398842 POLR3GLQ9BT43 218 aa32.12■■■□□ 2.73
CDH23-206ENST00000398842 ZFYVE9O95405 1425 aa32.12■■■□□ 2.73
CDH23-206ENST00000398842 ESF1Q9H501 851 aaKnown RBP32.12■■■□□ 2.73
CDH23-206ENST00000398842 VGFO15240 615 aaPredicted RBP32.1■■■□□ 2.73
CDH23-206ENST00000398842 C14orf93Q9H972 538 aaKnown RBP32.1■■■□□ 2.73
CDH23-206ENST00000398842 DISP3Q9P2K9 1392 aa32.09■■■□□ 2.73
CDH23-206ENST00000398842 CENPBP07199 599 aaPredicted RBP32.09■■■□□ 2.73
CDH23-206ENST00000398842 EIF3AQ14152 1382 aaKnown RBP32.08■■■□□ 2.73
CDH23-206ENST00000398842 ADGRB1O14514 1584 aa32.07■■■□□ 2.72
CDH23-206ENST00000398842 TMF1P82094 1093 aa32.05■■■□□ 2.72
CDH23-206ENST00000398842 MYO3AQ8NEV4 1616 aa32.03■■■□□ 2.72
CDH23-206ENST00000398842 PRKRIP1Q9H875 184 aaPredicted RBP32.02■■■□□ 2.72
CDH23-206ENST00000398842 A2ML1A8K2U0 1454 aa32.01■■■□□ 2.72
CDH23-206ENST00000398842 NUTM2DQ5VT03 806 aaPredicted RBP32.01■■■□□ 2.71
CDH23-206ENST00000398842 STAG3Q9UJ98 1225 aa31.96■■■□□ 2.71
CDH23-206ENST00000398842 TNRQ92752 1358 aa31.94■■■□□ 2.7
CDH23-206ENST00000398842 FER1L4A9Z1Z3 1794 aa31.94■■■□□ 2.7
CDH23-206ENST00000398842 KDM5AP29375 1690 aaKnown RBP31.92■■■□□ 2.7
CDH23-206ENST00000398842 SBNO2Q9Y2G9 1366 aa31.91■■■□□ 2.7
CDH23-206ENST00000398842 TMEM132EQ6IEE7 984 aa31.91■■■□□ 2.7
CDH23-206ENST00000398842 SLC24A1O60721 1099 aa31.9■■■□□ 2.7
CDH23-206ENST00000398842 PLPPR3Q6T4P5 718 aa31.9■■■□□ 2.7
CDH23-206ENST00000398842 C3P01024 1663 aa31.89■■■□□ 2.7
CDH23-206ENST00000398842 ASXL1Q8IXJ9 1541 aa31.89■■■□□ 2.7
CDH23-206ENST00000398842 CDCA8Q53HL2 280 aa31.89■■■□□ 2.69
CDH23-206ENST00000398842 RIMS2Q9UQ26 1411 aa31.88■■■□□ 2.69
CDH23-206ENST00000398842 CEBPAP49715 358 aaPredicted RBP31.88■■■□□ 2.69
CDH23-206ENST00000398842 ARHGEF28Q8N1W1 1705 aaKnown RBP31.87■■■□□ 2.69
CDH23-206ENST00000398842 TRAK1Q9UPV9 953 aa31.86■■■□□ 2.69
CDH23-206ENST00000398842 QRICH2Q9H0J4 1663 aa31.86■■■□□ 2.69
CDH23-206ENST00000398842 CENPJQ9HC77 1338 aaPredicted RBP31.86■■■□□ 2.69
CDH23-206ENST00000398842 UBR1Q8IWV7 1749 aa31.85■■■□□ 2.69
CDH23-206ENST00000398842 ALKQ9UM73 1620 aa31.84■■■□□ 2.69
CDH23-206ENST00000398842 ADAMTSL3P82987 1691 aa31.84■■■□□ 2.69
CDH23-206ENST00000398842 MYOM1P52179 1685 aa31.82■■■□□ 2.68
CDH23-206ENST00000398842 RIMS1Q86UR5 1692 aaKnown RBP31.82■■■□□ 2.68
CDH23-206ENST00000398842 PER1O15534 1290 aaPredicted RBP31.81■■■□□ 2.68
CDH23-206ENST00000398842 NLRP1Q9C000 1473 aa31.8■■■□□ 2.68
CDH23-206ENST00000398842 CCDC184Q52MB2 194 aa31.78■■■□□ 2.68
CDH23-206ENST00000398842 PANK3Q9H999 370 aa31.78■■■□□ 2.68
CDH23-206ENST00000398842 SETD1AO15047 1707 aaKnown RBP31.78■■■□□ 2.68
CDH23-206ENST00000398842 KTN1Q86UP2 1357 aaKnown RBP31.76■■■□□ 2.68
CDH23-206ENST00000398842 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.76■■■□□ 2.68
CDH23-206ENST00000398842 NRXN3Q9Y4C0 1643 aa31.74■■■□□ 2.67
CDH23-206ENST00000398842 YTHDC2Q9H6S0 1430 aaKnown RBP31.73■■■□□ 2.67
CDH23-206ENST00000398842 PTPRMP28827 1452 aa31.73■■■□□ 2.67
CDH23-206ENST00000398842 SENP3Q9H4L4 574 aaPredicted RBP31.72■■■□□ 2.67
CDH23-206ENST00000398842 TMEM2Q9UHN6 1383 aa31.71■■■□□ 2.67
CDH23-206ENST00000398842 RALBP1Q15311 655 aa31.7■■■□□ 2.67
CDH23-206ENST00000398842 MRS2Q9HD23 443 aa31.69■■■□□ 2.66
CDH23-206ENST00000398842 HDGFP51858 240 aaKnown RBP31.68■■■□□ 2.66
CDH23-206ENST00000398842 CNGB1Q14028 1251 aaPredicted RBP31.68■■■□□ 2.66
CDH23-206ENST00000398842 PARD3Q8TEW0 1356 aa31.68■■■□□ 2.66
CDH23-206ENST00000398842 STK26Q9P289 416 aa31.66■■■□□ 2.66
CDH23-206ENST00000398842 TULP4Q9NRJ4 1543 aa31.64■■■□□ 2.66
CDH23-206ENST00000398842 DLC1Q96QB1 1528 aa31.63■■■□□ 2.65
CDH23-206ENST00000398842 MYBBP1AQ9BQG0 1328 aaKnown RBP31.62■■■□□ 2.65
CDH23-206ENST00000398842 PUS7Q96PZ0 661 aaKnown RBP31.61■■■□□ 2.65
CDH23-206ENST00000398842 LRPPRCP42704 1394 aaKnown RBP31.61■■■□□ 2.65
CDH23-206ENST00000398842 SLIT1O75093 1534 aa31.59■■■□□ 2.65
CDH23-206ENST00000398842 EVC2Q86UK5 1308 aa31.59■■■□□ 2.65
CDH23-206ENST00000398842 ARHGAP23Q9P227 1491 aa31.58■■■□□ 2.65
CDH23-206ENST00000398842 KDM4FA0A1W2PPD8 638 aa31.58■■■□□ 2.65
CDH23-206ENST00000398842 KNSTRNQ9Y448 316 aa31.57■■■□□ 2.64
CDH23-206ENST00000398842 PRAM1Q96QH2 718 aa31.56■■■□□ 2.64
CDH23-206ENST00000398842 BRD4O60885 1362 aaPredicted RBP31.56■■■□□ 2.64
CDH23-206ENST00000398842 ABCC11Q96J66 1382 aa31.55■■■□□ 2.64
CDH23-206ENST00000398842 CC2D1BQ5T0F9 858 aaKnown RBP31.55■■■□□ 2.64
CDH23-206ENST00000398842 METP08581 1390 aa31.55■■■□□ 2.64
CDH23-206ENST00000398842 AMER1Q5JTC6 1135 aaPredicted RBP31.54■■■□□ 2.64
CDH23-206ENST00000398842 PLEKHG1Q9ULL1 1385 aa31.54■■■□□ 2.64
CDH23-206ENST00000398842 KNDC1Q76NI1 1749 aa31.54■■■□□ 2.64
CDH23-206ENST00000398842 NPC1L1Q9UHC9 1359 aa31.53■■■□□ 2.64
CDH23-206ENST00000398842 LTKP29376 864 aa31.53■■■□□ 2.64
CDH23-206ENST00000398842 SAFB2Q14151 953 aaKnown RBP eCLIP31.53■■■□□ 2.64
CDH23-206ENST00000398842 FAM9BQ8IZU0 186 aa31.52■■■□□ 2.64
CDH23-206ENST00000398842 POGKQ9P215 609 aa31.52■■■□□ 2.64
CDH23-206ENST00000398842 ADAMTS13Q76LX8 1427 aa31.52■■■□□ 2.64
CDH23-206ENST00000398842 SCAF1Q9H7N4 1312 aaKnown RBP31.51■■■□□ 2.63
CDH23-206ENST00000398842 NLRP13Q86W25 1043 aa31.49■■■□□ 2.63
CDH23-206ENST00000398842 TMC1Q8TDI8 760 aa31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms