RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 GPRASP1Q5JY77 1395 aa27.66■■■□□ 2.02
PDLIM2-205ENST00000397761 UBR1Q8IWV7 1749 aa27.65■■■□□ 2.02
PDLIM2-205ENST00000397761 ZFYVE9O95405 1425 aa27.64■■■□□ 2.02
PDLIM2-205ENST00000397761 A2ML1A8K2U0 1454 aa27.64■■■□□ 2.02
PDLIM2-205ENST00000397761 PTPRMP28827 1452 aa27.63■■■□□ 2.01
PDLIM2-205ENST00000397761 NLRP1Q9C000 1473 aa27.63■■■□□ 2.01
PDLIM2-205ENST00000397761 CHGAP10645 457 aaKnown RBP27.63■■■□□ 2.01
PDLIM2-205ENST00000397761 POLR1AO95602 1720 aaPredicted RBP27.59■■■□□ 2.01
PDLIM2-205ENST00000397761 PIK3C2GO75747 1445 aa27.59■■■□□ 2.01
PDLIM2-205ENST00000397761 SETD1BQ9UPS6 1966 aaKnown RBP27.58■■■□□ 2.01
PDLIM2-205ENST00000397761 MYO3AQ8NEV4 1616 aa27.58■■■□□ 2.01
PDLIM2-205ENST00000397761 EIF4G2P78344 907 aaKnown RBP eCLIP27.58■■■□□ 2.01
PDLIM2-205ENST00000397761 IQGAP1P46940 1657 aa27.58■■■□□ 2.01
PDLIM2-205ENST00000397761 ADGRF5Q8IZF2 1346 aa27.57■■■□□ 2
PDLIM2-205ENST00000397761 ROCK2O75116 1388 aaKnown RBP27.57■■■□□ 2
PDLIM2-205ENST00000397761 CEBPAP49715 358 aaPredicted RBP27.57■■■□□ 2
PDLIM2-205ENST00000397761 SETBP1Q9Y6X0 1596 aa27.55■■■□□ 2
PDLIM2-205ENST00000397761 HSPA5P11021 654 aaKnown RBP27.55■■■□□ 2
PDLIM2-205ENST00000397761 USP47Q96K76 1375 aa27.54■■■□□ 2
PDLIM2-205ENST00000397761 VGFO15240 615 aaPredicted RBP27.52■■■□□ 2
PDLIM2-205ENST00000397761 NBPF1Q3BBV0 1214 aa27.52■■■□□ 2
PDLIM2-205ENST00000397761 CARD11Q9BXL7 1154 aa27.52■■■□□ 2
PDLIM2-205ENST00000397761 ZNF142P52746 1687 aaPredicted RBP27.51■■□□□ 1.99
PDLIM2-205ENST00000397761 STAG3Q9UJ98 1225 aa27.49■■□□□ 1.99
PDLIM2-205ENST00000397761 RIMS2Q9UQ26 1411 aa27.48■■□□□ 1.99
PDLIM2-205ENST00000397761 ADGRB1O14514 1584 aa27.47■■□□□ 1.99
PDLIM2-205ENST00000397761 HIRIP3Q9BW71 556 aaPredicted RBP27.46■■□□□ 1.99
PDLIM2-205ENST00000397761 C14orf93Q9H972 538 aaKnown RBP27.45■■□□□ 1.99
PDLIM2-205ENST00000397761 CEP170BQ9Y4F5 1589 aaPredicted RBP27.45■■□□□ 1.99
PDLIM2-205ENST00000397761 SETD1AO15047 1707 aaKnown RBP27.44■■□□□ 1.98
PDLIM2-205ENST00000397761 SLIT1O75093 1534 aa27.44■■□□□ 1.98
PDLIM2-205ENST00000397761 TMEM2Q9UHN6 1383 aa27.43■■□□□ 1.98
PDLIM2-205ENST00000397761 CFAP70Q5T0N1 1121 aa27.43■■□□□ 1.98
PDLIM2-205ENST00000397761 SCAF11Q99590 1463 aaKnown RBP27.42■■□□□ 1.98
PDLIM2-205ENST00000397761 ARHGAP23Q9P227 1491 aa27.42■■□□□ 1.98
PDLIM2-205ENST00000397761 NRXN3Q9Y4C0 1643 aa27.41■■□□□ 1.98
PDLIM2-205ENST00000397761 ALKQ9UM73 1620 aa27.39■■□□□ 1.97
PDLIM2-205ENST00000397761 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.38■■□□□ 1.97
PDLIM2-205ENST00000397761 ASXL1Q8IXJ9 1541 aa27.38■■□□□ 1.97
PDLIM2-205ENST00000397761 NUTM2DQ5VT03 806 aaPredicted RBP27.38■■□□□ 1.97
PDLIM2-205ENST00000397761 DIEXFQ68CQ4 756 aaKnown RBP27.35■■□□□ 1.97
PDLIM2-205ENST00000397761 ST20-MTHFSA0A0A6YYL1 179 aa27.34■■□□□ 1.97
PDLIM2-205ENST00000397761 HDGFP51858 240 aaKnown RBP27.34■■□□□ 1.97
PDLIM2-205ENST00000397761 PLPPR3Q6T4P5 718 aa27.33■■□□□ 1.97
PDLIM2-205ENST00000397761 ARHGEF28Q8N1W1 1705 aaKnown RBP27.33■■□□□ 1.97
PDLIM2-205ENST00000397761 LMTK3Q96Q04 1460 aa27.33■■□□□ 1.97
PDLIM2-205ENST00000397761 EIF3AQ14152 1382 aaKnown RBP27.31■■□□□ 1.96
PDLIM2-205ENST00000397761 WASHC2AQ641Q2 1341 aa27.31■■□□□ 1.96
PDLIM2-205ENST00000397761 CCDC7Q96M83 1385 aa27.3■■□□□ 1.96
PDLIM2-205ENST00000397761 C11orf95C9JLR9 678 aaPredicted RBP27.3■■□□□ 1.96
PDLIM2-205ENST00000397761 THEMISQ8N1K5 641 aaPredicted RBP27.3■■□□□ 1.96
PDLIM2-205ENST00000397761 TESK2Q96S53 571 aa27.28■■□□□ 1.96
PDLIM2-205ENST00000397761 PLEKHG1Q9ULL1 1385 aa27.27■■□□□ 1.96
PDLIM2-205ENST00000397761 KIF7Q2M1P5 1343 aa27.25■■□□□ 1.95
PDLIM2-205ENST00000397761 QRICH2Q9H0J4 1663 aa27.25■■□□□ 1.95
PDLIM2-205ENST00000397761 LTKP29376 864 aa27.24■■□□□ 1.95
PDLIM2-205ENST00000397761 SBNO2Q9Y2G9 1366 aa27.24■■□□□ 1.95
PDLIM2-205ENST00000397761 KNDC1Q76NI1 1749 aa27.23■■□□□ 1.95
PDLIM2-205ENST00000397761 TMEM132EQ6IEE7 984 aa27.23■■□□□ 1.95
PDLIM2-205ENST00000397761 MED14O60244 1454 aa27.23■■□□□ 1.95
PDLIM2-205ENST00000397761 ADAMTS13Q76LX8 1427 aa27.22■■□□□ 1.95
PDLIM2-205ENST00000397761 YTHDC2Q9H6S0 1430 aaKnown RBP27.21■■□□□ 1.95
PDLIM2-205ENST00000397761 TXNDC2Q86VQ3 553 aa27.2■■□□□ 1.95
PDLIM2-205ENST00000397761 EID1Q9Y6B2 187 aa27.2■■□□□ 1.95
PDLIM2-205ENST00000397761 DIP2AQ14689 1571 aa27.2■■□□□ 1.94
PDLIM2-205ENST00000397761 DLC1Q96QB1 1528 aa27.2■■□□□ 1.94
PDLIM2-205ENST00000397761 DDX10Q13206 875 aaKnown RBP27.19■■□□□ 1.94
PDLIM2-205ENST00000397761 LRPPRCP42704 1394 aaKnown RBP27.16■■□□□ 1.94
PDLIM2-205ENST00000397761 SLC24A1O60721 1099 aa27.15■■□□□ 1.94
PDLIM2-205ENST00000397761 DISP3Q9P2K9 1392 aa27.15■■□□□ 1.94
PDLIM2-205ENST00000397761 TRAK1Q9UPV9 953 aa27.14■■□□□ 1.94
PDLIM2-205ENST00000397761 CENPJQ9HC77 1338 aaPredicted RBP27.14■■□□□ 1.94
PDLIM2-205ENST00000397761 METP08581 1390 aa27.13■■□□□ 1.93
PDLIM2-205ENST00000397761 TECPR2O15040 1411 aa27.13■■□□□ 1.93
PDLIM2-205ENST00000397761 ABCC11Q96J66 1382 aa27.12■■□□□ 1.93
PDLIM2-205ENST00000397761 TMF1P82094 1093 aa27.12■■□□□ 1.93
PDLIM2-205ENST00000397761 CPS1P31327 1500 aa27.11■■□□□ 1.93
PDLIM2-205ENST00000397761 SENP3Q9H4L4 574 aaPredicted RBP27.09■■□□□ 1.93
PDLIM2-205ENST00000397761 HSPA2P54652 639 aa27.08■■□□□ 1.93
PDLIM2-205ENST00000397761 MYOM1P52179 1685 aa27.08■■□□□ 1.92
PDLIM2-205ENST00000397761 TBX22Q9Y458 520 aa27.07■■□□□ 1.92
PDLIM2-205ENST00000397761 ANKLE2Q86XL3 938 aa27.06■■□□□ 1.92
PDLIM2-205ENST00000397761 XRN1Q8IZH2 1706 aaKnown RBP27.05■■□□□ 1.92
PDLIM2-205ENST00000397761 FAM135BQ49AJ0 1406 aa27.04■■□□□ 1.92
PDLIM2-205ENST00000397761 CDCA8Q53HL2 280 aa27.04■■□□□ 1.92
PDLIM2-205ENST00000397761 SIRT1Q96EB6 747 aa27.04■■□□□ 1.92
PDLIM2-205ENST00000397761 STK26Q9P289 416 aa27.04■■□□□ 1.92
PDLIM2-205ENST00000397761 CHD2O14647 1828 aaKnown RBP27.04■■□□□ 1.92
PDLIM2-205ENST00000397761 TULP4Q9NRJ4 1543 aa27.02■■□□□ 1.92
PDLIM2-205ENST00000397761 BCANQ96GW7 911 aa27.02■■□□□ 1.92
PDLIM2-205ENST00000397761 PIK3R4Q99570 1358 aa27.01■■□□□ 1.91
PDLIM2-205ENST00000397761 PTPRUQ92729 1446 aa27■■□□□ 1.91
PDLIM2-205ENST00000397761 SLC26A8Q96RN1 970 aa26.99■■□□□ 1.91
PDLIM2-205ENST00000397761 PRAM1Q96QH2 718 aa26.98■■□□□ 1.91
PDLIM2-205ENST00000397761 NPHP4O75161 1426 aaPredicted RBP26.98■■□□□ 1.91
PDLIM2-205ENST00000397761 MIER1Q8N108 512 aa26.97■■□□□ 1.91
PDLIM2-205ENST00000397761 PUS7Q96PZ0 661 aaKnown RBP26.97■■□□□ 1.91
PDLIM2-205ENST00000397761 STRCQ7RTU9 1775 aa26.95■■□□□ 1.91
PDLIM2-205ENST00000397761 PTCH1Q13635 1447 aa26.95■■□□□ 1.91
PDLIM2-205ENST00000397761 POLR3GLQ9BT43 218 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms