RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 CFAP70Q5T0N1 1121 aa21.81■■□□□ 1.08
SNX6-202ENST00000396526 ADGRF5Q8IZF2 1346 aa21.8■■□□□ 1.08
SNX6-202ENST00000396526 KNSTRNQ9Y448 316 aa21.79■■□□□ 1.08
SNX6-202ENST00000396526 ABCC3O15438 1527 aa21.79■■□□□ 1.08
SNX6-202ENST00000396526 SLC52A1Q9NWF4 448 aa21.78■■□□□ 1.08
SNX6-202ENST00000396526 PER1O15534 1290 aaPredicted RBP21.78■■□□□ 1.08
SNX6-202ENST00000396526 PNISRQ8TF01 805 aaKnown RBP21.78■■□□□ 1.08
SNX6-202ENST00000396526 UGGT1Q9NYU2 1555 aa21.77■■□□□ 1.08
SNX6-202ENST00000396526 DIP2CQ9Y2E4 1556 aa21.77■■□□□ 1.08
SNX6-202ENST00000396526 VGFO15240 615 aaPredicted RBP21.77■■□□□ 1.08
SNX6-202ENST00000396526 KIAA1210Q9ULL0 1709 aa21.76■■□□□ 1.07
SNX6-202ENST00000396526 ARHGAP31Q2M1Z3 1444 aa21.75■■□□□ 1.07
SNX6-202ENST00000396526 NOS1P29475 1434 aa21.74■■□□□ 1.07
SNX6-202ENST00000396526 YEATS2Q9ULM3 1422 aa21.74■■□□□ 1.07
SNX6-202ENST00000396526 CC2D1BQ5T0F9 858 aaKnown RBP21.74■■□□□ 1.07
SNX6-202ENST00000396526 PPP6R1Q9UPN7 881 aa21.74■■□□□ 1.07
SNX6-202ENST00000396526 RICTORQ6R327 1708 aa21.74■■□□□ 1.07
SNX6-202ENST00000396526 PARD3Q8TEW0 1356 aa21.73■■□□□ 1.07
SNX6-202ENST00000396526 ADGRB3O60242 1522 aa21.72■■□□□ 1.07
SNX6-202ENST00000396526 IQGAP1P46940 1657 aa21.71■■□□□ 1.07
SNX6-202ENST00000396526 BCANQ96GW7 911 aa21.71■■□□□ 1.07
SNX6-202ENST00000396526 C14orf93Q9H972 538 aaKnown RBP21.71■■□□□ 1.07
SNX6-202ENST00000396526 DIP2BQ9P265 1576 aa21.7■■□□□ 1.07
SNX6-202ENST00000396526 CFAP65Q6ZU64 1925 aaKnown RBP21.69■■□□□ 1.06
SNX6-202ENST00000396526 CENPJQ9HC77 1338 aaPredicted RBP21.68■■□□□ 1.06
SNX6-202ENST00000396526 CAMSAP1Q5T5Y3 1602 aa21.68■■□□□ 1.06
SNX6-202ENST00000396526 ERICH6BQ5W0A0 696 aa21.68■■□□□ 1.06
SNX6-202ENST00000396526 NRXN1Q9ULB1 1477 aa21.67■■□□□ 1.06
SNX6-202ENST00000396526 ZMYM4Q5VZL5 1548 aa21.67■■□□□ 1.06
SNX6-202ENST00000396526 STAG3Q9UJ98 1225 aa21.67■■□□□ 1.06
SNX6-202ENST00000396526 ZC3H13Q5T200 1668 aaKnown RBP21.66■■□□□ 1.06
SNX6-202ENST00000396526 IDI1Q13907 227 aa21.66■■□□□ 1.06
SNX6-202ENST00000396526 ESF1Q9H501 851 aaKnown RBP21.65■■□□□ 1.06
SNX6-202ENST00000396526 TRAK1Q9UPV9 953 aa21.65■■□□□ 1.06
SNX6-202ENST00000396526 SBNO2Q9Y2G9 1366 aa21.64■■□□□ 1.06
SNX6-202ENST00000396526 LRPPRCP42704 1394 aaKnown RBP21.63■■□□□ 1.05
SNX6-202ENST00000396526 PIK3C2GO75747 1445 aa21.63■■□□□ 1.05
SNX6-202ENST00000396526 SETBP1Q9Y6X0 1596 aa21.62■■□□□ 1.05
SNX6-202ENST00000396526 MROH2AA6NES4 1674 aa21.61■■□□□ 1.05
SNX6-202ENST00000396526 NUDCQ9Y266 331 aa21.61■■□□□ 1.05
SNX6-202ENST00000396526 IFT172Q9UG01 1749 aa21.6■■□□□ 1.05
SNX6-202ENST00000396526 SYNMO15061 1565 aa21.6■■□□□ 1.05
SNX6-202ENST00000396526 TSPOAP1O95153 1857 aa21.6■■□□□ 1.05
SNX6-202ENST00000396526 TMEM132EQ6IEE7 984 aa21.58■■□□□ 1.05
SNX6-202ENST00000396526 NPC1L1Q9UHC9 1359 aa21.58■■□□□ 1.05
SNX6-202ENST00000396526 SMG6Q86US8 1419 aaKnown RBP21.58■■□□□ 1.04
SNX6-202ENST00000396526 AMER1Q5JTC6 1135 aaPredicted RBP21.57■■□□□ 1.04
SNX6-202ENST00000396526 AGLP35573 1532 aa21.57■■□□□ 1.04
SNX6-202ENST00000396526 WDR43Q15061 677 aaKnown RBP eCLIP21.56■■□□□ 1.04
SNX6-202ENST00000396526 NUTM2DQ5VT03 806 aaPredicted RBP21.56■■□□□ 1.04
SNX6-202ENST00000396526 PDE3BQ13370 1112 aa21.56■■□□□ 1.04
SNX6-202ENST00000396526 KDM5AP29375 1690 aaKnown RBP21.56■■□□□ 1.04
SNX6-202ENST00000396526 PPLO60437 1756 aa21.56■■□□□ 1.04
SNX6-202ENST00000396526 ZFYVE9O95405 1425 aa21.56■■□□□ 1.04
SNX6-202ENST00000396526 INSRP06213 1382 aa21.55■■□□□ 1.04
SNX6-202ENST00000396526 ASXL1Q8IXJ9 1541 aa21.55■■□□□ 1.04
SNX6-202ENST00000396526 REREQ9P2R6 1566 aa21.54■■□□□ 1.04
SNX6-202ENST00000396526 MLECQ14165 292 aa21.54■■□□□ 1.04
SNX6-202ENST00000396526 ERVK-7P63135 1459 aa21.54■■□□□ 1.04
SNX6-202ENST00000396526 PIK3C2BO00750 1634 aa21.54■■□□□ 1.04
SNX6-202ENST00000396526 EVC2Q86UK5 1308 aa21.54■■□□□ 1.04
SNX6-202ENST00000396526 PPP2R1AP30153 589 aa21.53■■□□□ 1.04
SNX6-202ENST00000396526 PUS7Q96PZ0 661 aaKnown RBP21.53■■□□□ 1.04
SNX6-202ENST00000396526 FBXO31Q5XUX0 539 aaPredicted RBP21.52■■□□□ 1.04
SNX6-202ENST00000396526 IRX6P78412 446 aaPredicted RBP21.51■■□□□ 1.03
SNX6-202ENST00000396526 PPP4R2Q9NY27 417 aa21.5■■□□□ 1.03
SNX6-202ENST00000396526 SIGLEC1Q9BZZ2 1709 aa21.49■■□□□ 1.03
SNX6-202ENST00000396526 NEXMIFQ5QGS0 1516 aa21.49■■□□□ 1.03
SNX6-202ENST00000396526 MYO3AQ8NEV4 1616 aa21.48■■□□□ 1.03
SNX6-202ENST00000396526 SALL2Q9Y467 1007 aaPredicted RBP21.47■■□□□ 1.03
SNX6-202ENST00000396526 ADGRB1O14514 1584 aa21.47■■□□□ 1.03
SNX6-202ENST00000396526 PREX1Q8TCU6 1659 aa21.47■■□□□ 1.03
SNX6-202ENST00000396526 HDGFP51858 240 aaKnown RBP21.47■■□□□ 1.03
SNX6-202ENST00000396526 POGKQ9P215 609 aa21.46■■□□□ 1.03
SNX6-202ENST00000396526 STK26Q9P289 416 aa21.46■■□□□ 1.03
SNX6-202ENST00000396526 SENP3-EIF4A1A0A087X0R7 540 aa21.44■■□□□ 1.02
SNX6-202ENST00000396526 MORC1Q86VD1 984 aa21.42■■□□□ 1.02
SNX6-202ENST00000396526 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.42■■□□□ 1.02
SNX6-202ENST00000396526 SLC12A5Q9H2X9 1139 aa21.42■■□□□ 1.02
SNX6-202ENST00000396526 ADAMTS8Q9UP79 889 aa21.42■■□□□ 1.02
SNX6-202ENST00000396526 CARD14Q9BXL6 1004 aa21.41■■□□□ 1.02
SNX6-202ENST00000396526 CGNL1Q0VF96 1302 aa21.4■■□□□ 1.02
SNX6-202ENST00000396526 SRPK2P78362 688 aaKnown RBP21.4■■□□□ 1.02
SNX6-202ENST00000396526 TMEM131LA2VDJ0 1609 aa21.4■■□□□ 1.02
SNX6-202ENST00000396526 ARHGEF40Q8TER5 1519 aa21.4■■□□□ 1.02
SNX6-202ENST00000396526 SAFB2Q14151 953 aaKnown RBP eCLIP21.39■■□□□ 1.02
SNX6-202ENST00000396526 BLMP54132 1417 aaPredicted RBP21.39■■□□□ 1.01
SNX6-202ENST00000396526 SENP3Q9H4L4 574 aaPredicted RBP21.38■■□□□ 1.01
SNX6-202ENST00000396526 MYOM1P52179 1685 aa21.38■■□□□ 1.01
SNX6-202ENST00000396526 QRICH2Q9H0J4 1663 aa21.38■■□□□ 1.01
SNX6-202ENST00000396526 NSD3Q9BZ95 1437 aa21.37■■□□□ 1.01
SNX6-202ENST00000396526 NINLQ9Y2I6 1382 aa21.37■■□□□ 1.01
SNX6-202ENST00000396526 ZMYM3Q14202 1370 aa21.37■■□□□ 1.01
SNX6-202ENST00000396526 RCAN3Q9UKA8 241 aa21.36■■□□□ 1.01
SNX6-202ENST00000396526 NGEFQ8N5V2 710 aa21.35■■□□□ 1.01
SNX6-202ENST00000396526 PRAM1Q96QH2 718 aa21.35■■□□□ 1.01
SNX6-202ENST00000396526 CLTCQ00610 1675 aaKnown RBP21.35■■□□□ 1.01
SNX6-202ENST00000396526 ATAD2Q6PL18 1390 aa21.35■■□□□ 1.01
SNX6-202ENST00000396526 YTHDC2Q9H6S0 1430 aaKnown RBP21.35■■□□□ 1.01
SNX6-202ENST00000396526 CFAP53Q96M91 514 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms