RNA–Protein interactions for RNA: ENST00000395892.5

CLIC1-209, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLIC1, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-209ENST00000395892 KIF7Q2M1P5 1343 aa18.81■□□□□ 0.6
CLIC1-209ENST00000395892 POLR1AO95602 1720 aaPredicted RBP18.81■□□□□ 0.6
CLIC1-209ENST00000395892 IDI1Q13907 227 aa18.81■□□□□ 0.6
CLIC1-209ENST00000395892 NRXN1Q9ULB1 1477 aa18.81■□□□□ 0.6
CLIC1-209ENST00000395892 PREX1Q8TCU6 1659 aa18.81■□□□□ 0.6
CLIC1-209ENST00000395892 ST20-MTHFSA0A0A6YYL1 179 aa18.8■□□□□ 0.6
CLIC1-209ENST00000395892 FBXO31Q5XUX0 539 aaPredicted RBP18.8■□□□□ 0.6
CLIC1-209ENST00000395892 RPGRIP1LQ68CZ1 1315 aa18.79■□□□□ 0.6
CLIC1-209ENST00000395892 ADGRF5Q8IZF2 1346 aa18.79■□□□□ 0.6
CLIC1-209ENST00000395892 SLC52A1Q9NWF4 448 aa18.79■□□□□ 0.6
CLIC1-209ENST00000395892 CLTCQ00610 1675 aaKnown RBP18.79■□□□□ 0.6
CLIC1-209ENST00000395892 CNKSR2Q8WXI2 1034 aa18.78■□□□□ 0.6
CLIC1-209ENST00000395892 KIAA1210Q9ULL0 1709 aa18.77■□□□□ 0.6
CLIC1-209ENST00000395892 MLECQ14165 292 aa18.77■□□□□ 0.6
CLIC1-209ENST00000395892 PPLO60437 1756 aa18.77■□□□□ 0.6
CLIC1-209ENST00000395892 ERVK-7P63135 1459 aa18.77■□□□□ 0.59
CLIC1-209ENST00000395892 ARID4BQ4LE39 1312 aaPredicted RBP18.76■□□□□ 0.59
CLIC1-209ENST00000395892 CHGAP10645 457 aaKnown RBP18.75■□□□□ 0.59
CLIC1-209ENST00000395892 TESK2Q96S53 571 aa18.74■□□□□ 0.59
CLIC1-209ENST00000395892 CFAP70Q5T0N1 1121 aa18.73■□□□□ 0.59
CLIC1-209ENST00000395892 SPATA31D1Q6ZQQ2 1576 aa18.72■□□□□ 0.59
CLIC1-209ENST00000395892 ZMYM3Q14202 1370 aa18.72■□□□□ 0.59
CLIC1-209ENST00000395892 TMEM131LA2VDJ0 1609 aa18.72■□□□□ 0.59
CLIC1-209ENST00000395892 HOXD11P31277 338 aaPredicted RBP18.72■□□□□ 0.59
CLIC1-209ENST00000395892 IQGAP1P46940 1657 aa18.72■□□□□ 0.59
CLIC1-209ENST00000395892 NEXMIFQ5QGS0 1516 aa18.7■□□□□ 0.58
CLIC1-209ENST00000395892 C14orf93Q9H972 538 aaKnown RBP18.7■□□□□ 0.58
CLIC1-209ENST00000395892 ZFYVE9O95405 1425 aa18.69■□□□□ 0.58
CLIC1-209ENST00000395892 MYO5BQ9ULV0 1848 aa18.69■□□□□ 0.58
CLIC1-209ENST00000395892 PIK3C2GO75747 1445 aa18.68■□□□□ 0.58
CLIC1-209ENST00000395892 SCAF11Q99590 1463 aaKnown RBP18.68■□□□□ 0.58
CLIC1-209ENST00000395892 DCAF8L1A6NGE4 600 aa18.66■□□□□ 0.58
CLIC1-209ENST00000395892 ANP32CO43423 234 aa18.66■□□□□ 0.58
CLIC1-209ENST00000395892 CCER2I3L3R5 266 aa18.65■□□□□ 0.58
CLIC1-209ENST00000395892 VGFO15240 615 aaPredicted RBP18.65■□□□□ 0.58
CLIC1-209ENST00000395892 SETBP1Q9Y6X0 1596 aa18.64■□□□□ 0.58
CLIC1-209ENST00000395892 ESF1Q9H501 851 aaKnown RBP18.62■□□□□ 0.57
CLIC1-209ENST00000395892 DISP3Q9P2K9 1392 aa18.62■□□□□ 0.57
CLIC1-209ENST00000395892 A2ML1A8K2U0 1454 aa18.62■□□□□ 0.57
CLIC1-209ENST00000395892 ADGRB1O14514 1584 aa18.62■□□□□ 0.57
CLIC1-209ENST00000395892 NUTM2DQ5VT03 806 aaPredicted RBP18.61■□□□□ 0.57
CLIC1-209ENST00000395892 RNF216Q9NWF9 866 aaPredicted RBP18.6■□□□□ 0.57
CLIC1-209ENST00000395892 TMF1P82094 1093 aa18.58■□□□□ 0.56
CLIC1-209ENST00000395892 POLR3GLQ9BT43 218 aa18.57■□□□□ 0.56
CLIC1-209ENST00000395892 TNRQ92752 1358 aa18.56■□□□□ 0.56
CLIC1-209ENST00000395892 TMEM132EQ6IEE7 984 aa18.56■□□□□ 0.56
CLIC1-209ENST00000395892 PRKRIP1Q9H875 184 aaPredicted RBP18.56■□□□□ 0.56
CLIC1-209ENST00000395892 MYO3AQ8NEV4 1616 aa18.55■□□□□ 0.56
CLIC1-209ENST00000395892 CEBPAP49715 358 aaPredicted RBP18.54■□□□□ 0.56
CLIC1-209ENST00000395892 EIF3AQ14152 1382 aaKnown RBP18.54■□□□□ 0.56
CLIC1-209ENST00000395892 PER1O15534 1290 aaPredicted RBP18.53■□□□□ 0.56
CLIC1-209ENST00000395892 YTHDC1Q96MU7 727 aaKnown RBP18.53■□□□□ 0.56
CLIC1-209ENST00000395892 STAG3Q9UJ98 1225 aa18.53■□□□□ 0.56
CLIC1-209ENST00000395892 RIMS2Q9UQ26 1411 aa18.53■□□□□ 0.56
CLIC1-209ENST00000395892 C3P01024 1663 aa18.52■□□□□ 0.56
CLIC1-209ENST00000395892 ASXL1Q8IXJ9 1541 aa18.52■□□□□ 0.56
CLIC1-209ENST00000395892 KDM5AP29375 1690 aaKnown RBP18.51■□□□□ 0.55
CLIC1-209ENST00000395892 TRAK1Q9UPV9 953 aa18.51■□□□□ 0.55
CLIC1-209ENST00000395892 SBNO2Q9Y2G9 1366 aa18.51■□□□□ 0.55
CLIC1-209ENST00000395892 SLC24A1O60721 1099 aa18.5■□□□□ 0.55
CLIC1-209ENST00000395892 FER1L4A9Z1Z3 1794 aa18.5■□□□□ 0.55
CLIC1-209ENST00000395892 ALKQ9UM73 1620 aa18.49■□□□□ 0.55
CLIC1-209ENST00000395892 UBR1Q8IWV7 1749 aa18.49■□□□□ 0.55
CLIC1-209ENST00000395892 CCDC184Q52MB2 194 aa18.48■□□□□ 0.55
CLIC1-209ENST00000395892 CENPJQ9HC77 1338 aaPredicted RBP18.48■□□□□ 0.55
CLIC1-209ENST00000395892 NLRP1Q9C000 1473 aa18.47■□□□□ 0.55
CLIC1-209ENST00000395892 CDCA8Q53HL2 280 aa18.47■□□□□ 0.55
CLIC1-209ENST00000395892 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.47■□□□□ 0.55
CLIC1-209ENST00000395892 PTPRMP28827 1452 aa18.46■□□□□ 0.55
CLIC1-209ENST00000395892 NCBP3Q53F19 620 aaKnown RBP18.46■□□□□ 0.55
CLIC1-209ENST00000395892 PANK3Q9H999 370 aa18.46■□□□□ 0.55
CLIC1-209ENST00000395892 SETD1AO15047 1707 aaKnown RBP18.45■□□□□ 0.54
CLIC1-209ENST00000395892 ARHGEF28Q8N1W1 1705 aaKnown RBP18.45■□□□□ 0.54
CLIC1-209ENST00000395892 TMEM2Q9UHN6 1383 aa18.44■□□□□ 0.54
CLIC1-209ENST00000395892 CENPBP07199 599 aaPredicted RBP18.44■□□□□ 0.54
CLIC1-209ENST00000395892 NRXN3Q9Y4C0 1643 aa18.44■□□□□ 0.54
CLIC1-209ENST00000395892 ADAMTSL3P82987 1691 aa18.43■□□□□ 0.54
CLIC1-209ENST00000395892 QRICH2Q9H0J4 1663 aa18.43■□□□□ 0.54
CLIC1-209ENST00000395892 YTHDC2Q9H6S0 1430 aaKnown RBP18.42■□□□□ 0.54
CLIC1-209ENST00000395892 HDGFP51858 240 aaKnown RBP18.42■□□□□ 0.54
CLIC1-209ENST00000395892 MYOM1P52179 1685 aa18.41■□□□□ 0.54
CLIC1-209ENST00000395892 PUS7Q96PZ0 661 aaKnown RBP18.41■□□□□ 0.54
CLIC1-209ENST00000395892 LTKP29376 864 aa18.39■□□□□ 0.53
CLIC1-209ENST00000395892 STK26Q9P289 416 aa18.39■□□□□ 0.53
CLIC1-209ENST00000395892 KTN1Q86UP2 1357 aaKnown RBP18.39■□□□□ 0.53
CLIC1-209ENST00000395892 ARHGAP23Q9P227 1491 aa18.39■□□□□ 0.53
CLIC1-209ENST00000395892 RALBP1Q15311 655 aa18.38■□□□□ 0.53
CLIC1-209ENST00000395892 LRPPRCP42704 1394 aaKnown RBP18.38■□□□□ 0.53
CLIC1-209ENST00000395892 ABCC11Q96J66 1382 aa18.37■□□□□ 0.53
CLIC1-209ENST00000395892 RIMS1Q86UR5 1692 aaKnown RBP18.37■□□□□ 0.53
CLIC1-209ENST00000395892 SLIT1O75093 1534 aa18.36■□□□□ 0.53
CLIC1-209ENST00000395892 METP08581 1390 aa18.36■□□□□ 0.53
CLIC1-209ENST00000395892 PARD3Q8TEW0 1356 aa18.36■□□□□ 0.53
CLIC1-209ENST00000395892 DLC1Q96QB1 1528 aa18.36■□□□□ 0.53
CLIC1-209ENST00000395892 TULP4Q9NRJ4 1543 aa18.35■□□□□ 0.53
CLIC1-209ENST00000395892 ADAMTS13Q76LX8 1427 aa18.35■□□□□ 0.53
CLIC1-209ENST00000395892 MED14O60244 1454 aa18.34■□□□□ 0.53
CLIC1-209ENST00000395892 PLEKHG1Q9ULL1 1385 aa18.34■□□□□ 0.53
CLIC1-209ENST00000395892 AMER1Q5JTC6 1135 aaPredicted RBP18.34■□□□□ 0.53
CLIC1-209ENST00000395892 SIRT1Q96EB6 747 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms