RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 GPRASP1Q5JY77 1395 aa21.25■□□□□ 0.99
CNP-201ENST00000393888 ARXQ96QS3 562 aa21.25■□□□□ 0.99
CNP-201ENST00000393888 PRDM15P57071 1507 aaPredicted RBP21.24■□□□□ 0.99
CNP-201ENST00000393888 MAGI2Q86UL8 1455 aa21.23■□□□□ 0.99
CNP-201ENST00000393888 PLA2R1Q13018 1463 aa21.23■□□□□ 0.99
CNP-201ENST00000393888 ABCA8O94911 1581 aa21.23■□□□□ 0.99
CNP-201ENST00000393888 APAF1O14727 1248 aa21.22■□□□□ 0.99
CNP-201ENST00000393888 ABCC10Q5T3U5 1492 aa21.21■□□□□ 0.99
CNP-201ENST00000393888 DMRT2Q9Y5R5 561 aa21.2■□□□□ 0.98
CNP-201ENST00000393888 AMER1Q5JTC6 1135 aaPredicted RBP21.19■□□□□ 0.98
CNP-201ENST00000393888 CYB5RLQ6IPT4 315 aa21.19■□□□□ 0.98
CNP-201ENST00000393888 RSPH6AQ9H0K4 717 aa21.19■□□□□ 0.98
CNP-201ENST00000393888 RRAGDQ9NQL2 400 aaPredicted RBP21.18■□□□□ 0.98
CNP-201ENST00000393888 MYO5CQ9NQX4 1742 aa21.17■□□□□ 0.98
CNP-201ENST00000393888 PANK1Q8TE04 598 aa21.17■□□□□ 0.98
CNP-201ENST00000393888 COG6Q9Y2V7 657 aa21.17■□□□□ 0.98
CNP-201ENST00000393888 WDR7Q9Y4E6 1490 aa21.16■□□□□ 0.98
CNP-201ENST00000393888 TRMT2AQ8IZ69 625 aaKnown RBP21.16■□□□□ 0.98
CNP-201ENST00000393888 ATP10BO94823 1461 aa21.16■□□□□ 0.98
CNP-201ENST00000393888 EIF3AQ14152 1382 aaKnown RBP21.15■□□□□ 0.98
CNP-201ENST00000393888 SPRYD3Q8NCJ5 442 aa21.15■□□□□ 0.98
CNP-201ENST00000393888 RIMBP3CA6NJZ7 1639 aa21.14■□□□□ 0.98
CNP-201ENST00000393888 RIMBP3BA6NNM3 1639 aa21.14■□□□□ 0.98
CNP-201ENST00000393888 RIMBP3Q9UFD9 1639 aa21.14■□□□□ 0.98
CNP-201ENST00000393888 CANXP27824 592 aaKnown RBP21.14■□□□□ 0.97
CNP-201ENST00000393888 NKTRP30414 1462 aaKnown RBP21.14■□□□□ 0.97
CNP-201ENST00000393888 BECN1Q14457 450 aa21.12■□□□□ 0.97
CNP-201ENST00000393888 ABCC2Q92887 1545 aa21.12■□□□□ 0.97
CNP-201ENST00000393888 LAMC1P11047 1609 aa21.11■□□□□ 0.97
CNP-201ENST00000393888 CLUAP1Q96AJ1 413 aa21.1■□□□□ 0.97
CNP-201ENST00000393888 VIRMAQ69YN4 1812 aaKnown RBP21.1■□□□□ 0.97
CNP-201ENST00000393888 CCDC141Q6ZP82 1450 aa21.1■□□□□ 0.97
CNP-201ENST00000393888 ARHGEF5Q12774 1597 aa21.08■□□□□ 0.97
CNP-201ENST00000393888 E9PSI1 815 aa21.08■□□□□ 0.96
CNP-201ENST00000393888 SAMD9LQ8IVG5 1584 aa21.08■□□□□ 0.96
CNP-201ENST00000393888 GZF1Q9H116 711 aaPredicted RBP21.07■□□□□ 0.96
CNP-201ENST00000393888 ANTXR1Q9H6X2 564 aa21.07■□□□□ 0.96
CNP-201ENST00000393888 EIF2AK4Q9P2K8 1649 aaKnown RBP21.06■□□□□ 0.96
CNP-201ENST00000393888 NEUROD2Q15784 382 aa21.06■□□□□ 0.96
CNP-201ENST00000393888 TNNQ9UQP3 1299 aa21.06■□□□□ 0.96
CNP-201ENST00000393888 CGNL1Q0VF96 1302 aa21.05■□□□□ 0.96
CNP-201ENST00000393888 CENPJQ9HC77 1338 aaPredicted RBP21.05■□□□□ 0.96
CNP-201ENST00000393888 MAPK8IP3Q9UPT6 1336 aa21.05■□□□□ 0.96
CNP-201ENST00000393888 NLRP1Q9C000 1473 aa21.05■□□□□ 0.96
CNP-201ENST00000393888 TBC1D2Q9BYX2 928 aa21.04■□□□□ 0.96
CNP-201ENST00000393888 L1TD1Q5T7N2 865 aaKnown RBP21.04■□□□□ 0.96
CNP-201ENST00000393888 ASXL1Q8IXJ9 1541 aa21.03■□□□□ 0.96
CNP-201ENST00000393888 UHRF1BP1LA0JNW5 1464 aa21.03■□□□□ 0.96
CNP-201ENST00000393888 PIK3C2GO75747 1445 aa21.03■□□□□ 0.96
CNP-201ENST00000393888 PDE3AQ14432 1141 aa21.02■□□□□ 0.96
CNP-201ENST00000393888 BCL2L13Q9BXK5 485 aa21.02■□□□□ 0.96
CNP-201ENST00000393888 PANK2Q9BZ23 570 aa21.02■□□□□ 0.96
CNP-201ENST00000393888 CDC42BPBQ9Y5S2 1711 aa21.02■□□□□ 0.96
CNP-201ENST00000393888 XRCC6P12956 609 aaKnown RBP eCLIP21.02■□□□□ 0.96
CNP-201ENST00000393888 RRP7AQ9Y3A4 280 aaKnown RBP21.02■□□□□ 0.96
CNP-201ENST00000393888 PCDHB15Q9Y5E8 787 aa21.02■□□□□ 0.96
CNP-201ENST00000393888 ZCCHC11Q5TAX3 1644 aaKnown RBP21.01■□□□□ 0.95
CNP-201ENST00000393888 SYCP2Q9BX26 1530 aa21.01■□□□□ 0.95
CNP-201ENST00000393888 UPF2Q9HAU5 1272 aaKnown RBP21■□□□□ 0.95
CNP-201ENST00000393888 UNC13BO14795 1591 aa20.99■□□□□ 0.95
CNP-201ENST00000393888 RLBP1P12271 317 aa20.99■□□□□ 0.95
CNP-201ENST00000393888 WWC1Q8IX03 1113 aa20.99■□□□□ 0.95
CNP-201ENST00000393888 TBC1D32Q96NH3 1257 aa20.99■□□□□ 0.95
CNP-201ENST00000393888 PDZRN3Q9UPQ7 1066 aa20.99■□□□□ 0.95
CNP-201ENST00000393888 RNF17Q9BXT8 1623 aaKnown RBP20.99■□□□□ 0.95
CNP-201ENST00000393888 CDCA8Q53HL2 280 aa20.98■□□□□ 0.95
CNP-201ENST00000393888 GOLGA6L3A6NEY3 463 aa20.97■□□□□ 0.95
CNP-201ENST00000393888 RSPH4AQ5TD94 716 aa20.97■□□□□ 0.95
CNP-201ENST00000393888 NAP1L5Q96NT1 182 aaPredicted RBP20.96■□□□□ 0.95
CNP-201ENST00000393888 SYNMO15061 1565 aa20.96■□□□□ 0.95
CNP-201ENST00000393888 NPM1P06748 294 aaKnown RBP eCLIP20.96■□□□□ 0.95
CNP-201ENST00000393888 TNNT2P45379 298 aaPredicted RBP20.96■□□□□ 0.95
CNP-201ENST00000393888 CARD14Q9BXL6 1004 aa20.94■□□□□ 0.94
CNP-201ENST00000393888 IQGAP3Q86VI3 1631 aa20.94■□□□□ 0.94
CNP-201ENST00000393888 MCM4P33991 863 aa20.93■□□□□ 0.94
CNP-201ENST00000393888 IQGAP1P46940 1657 aa20.93■□□□□ 0.94
CNP-201ENST00000393888 RARSP54136 660 aaKnown RBP20.93■□□□□ 0.94
CNP-201ENST00000393888 PMFBP1Q8TBY8 1022 aa20.93■□□□□ 0.94
CNP-201ENST00000393888 MYOM1P52179 1685 aa20.93■□□□□ 0.94
CNP-201ENST00000393888 PREX2Q70Z35 1606 aa20.92■□□□□ 0.94
CNP-201ENST00000393888 ARHGAP5Q13017 1502 aa20.92■□□□□ 0.94
CNP-201ENST00000393888 MADDQ8WXG6 1647 aa20.91■□□□□ 0.94
CNP-201ENST00000393888 SCAF11Q99590 1463 aaKnown RBP20.91■□□□□ 0.94
CNP-201ENST00000393888 FSD2A1L4K1 749 aa20.9■□□□□ 0.94
CNP-201ENST00000393888 MFAP1P55081 439 aaKnown RBP20.9■□□□□ 0.94
CNP-201ENST00000393888 ASXL2Q76L83 1435 aa20.9■□□□□ 0.94
CNP-201ENST00000393888 PNNQ9H307 717 aaKnown RBP20.9■□□□□ 0.94
CNP-201ENST00000393888 TRAK2O60296 914 aa20.88■□□□□ 0.93
CNP-201ENST00000393888 ATP10AO60312 1499 aa20.87■□□□□ 0.93
CNP-201ENST00000393888 NPC1L1Q9UHC9 1359 aa20.87■□□□□ 0.93
CNP-201ENST00000393888 NINLQ9Y2I6 1382 aa20.87■□□□□ 0.93
CNP-201ENST00000393888 TCP11L2Q8N4U5 519 aa20.86■□□□□ 0.93
CNP-201ENST00000393888 C22orf23Q9BZE7 217 aa20.86■□□□□ 0.93
CNP-201ENST00000393888 RWDD1Q9H446 243 aaPredicted RBP20.86■□□□□ 0.93
CNP-201ENST00000393888 MAST1Q9Y2H9 1570 aa20.85■□□□□ 0.93
CNP-201ENST00000393888 TTC37Q6PGP7 1564 aa20.85■□□□□ 0.93
CNP-201ENST00000393888 CFAP70Q5T0N1 1121 aa20.85■□□□□ 0.93
CNP-201ENST00000393888 CHMP5Q9NZZ3 219 aa20.83■□□□□ 0.93
CNP-201ENST00000393888 KDM5AP29375 1690 aaKnown RBP20.83■□□□□ 0.92
CNP-201ENST00000393888 CLCN1P35523 988 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms