RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 CTTNBP2Q8WZ74 1663 aa20.85■□□□□ 0.93
SCN3B-202ENST00000392770 GGNBP2Q9H3C7 697 aa20.84■□□□□ 0.93
SCN3B-202ENST00000392770 ERBINQ96RT1 1412 aa20.84■□□□□ 0.93
SCN3B-202ENST00000392770 MFAP1P55081 439 aaKnown RBP20.83■□□□□ 0.93
SCN3B-202ENST00000392770 RIPK4P57078 832 aa20.83■□□□□ 0.93
SCN3B-202ENST00000392770 ZKSCAN2Q63HK3 967 aa20.83■□□□□ 0.93
SCN3B-202ENST00000392770 KIAA1211Q6ZU35 1233 aa20.82■□□□□ 0.92
SCN3B-202ENST00000392770 AKNAQ7Z591 1439 aa20.82■□□□□ 0.92
SCN3B-202ENST00000392770 C1orf141Q5JVX7 400 aa20.82■□□□□ 0.92
SCN3B-202ENST00000392770 PSME1Q06323 249 aa20.82■□□□□ 0.92
SCN3B-202ENST00000392770 THOC2Q8NI27 1593 aaKnown RBP20.81■□□□□ 0.92
SCN3B-202ENST00000392770 CENPQQ7L2Z9 268 aaPredicted RBP20.81■□□□□ 0.92
SCN3B-202ENST00000392770 CHMP3Q9Y3E7 222 aa20.8■□□□□ 0.92
SCN3B-202ENST00000392770 PTMAP06454 111 aaKnown RBP20.8■□□□□ 0.92
SCN3B-202ENST00000392770 RAPGEF6Q8TEU7 1601 aa20.79■□□□□ 0.92
SCN3B-202ENST00000392770 PRAM1Q96QH2 718 aa20.78■□□□□ 0.92
SCN3B-202ENST00000392770 COG6Q9Y2V7 657 aa20.78■□□□□ 0.92
SCN3B-202ENST00000392770 NGEFQ8N5V2 710 aa20.78■□□□□ 0.92
SCN3B-202ENST00000392770 TRIM6-TRIM34B2RNG4 842 aa20.77■□□□□ 0.92
SCN3B-202ENST00000392770 PPP2R1AP30153 589 aa20.77■□□□□ 0.92
SCN3B-202ENST00000392770 HDAC5Q9UQL6 1122 aa20.77■□□□□ 0.92
SCN3B-202ENST00000392770 GPATCH3Q96I76 525 aa20.77■□□□□ 0.91
SCN3B-202ENST00000392770 ADAMTS8Q9UP79 889 aa20.76■□□□□ 0.91
SCN3B-202ENST00000392770 HMOX1P09601 288 aa20.76■□□□□ 0.91
SCN3B-202ENST00000392770 CD109Q6YHK3 1445 aa20.76■□□□□ 0.91
SCN3B-202ENST00000392770 ADGRL1O94910 1474 aa20.76■□□□□ 0.91
SCN3B-202ENST00000392770 KIF21AQ7Z4S6 1674 aa20.74■□□□□ 0.91
SCN3B-202ENST00000392770 TXNDC2Q86VQ3 553 aa20.74■□□□□ 0.91
SCN3B-202ENST00000392770 ANKRD30BQ9BXX2 1392 aa20.73■□□□□ 0.91
SCN3B-202ENST00000392770 MTHFSP49914 203 aa20.73■□□□□ 0.91
SCN3B-202ENST00000392770 SLC52A1Q9NWF4 448 aa20.73■□□□□ 0.91
SCN3B-202ENST00000392770 TEFQ10587 303 aa20.72■□□□□ 0.91
SCN3B-202ENST00000392770 EVA1CP58658 441 aa20.72■□□□□ 0.91
SCN3B-202ENST00000392770 IPO9Q96P70 1041 aaKnown RBP20.72■□□□□ 0.91
SCN3B-202ENST00000392770 SLKQ9H2G2 1235 aaPredicted RBP20.72■□□□□ 0.91
SCN3B-202ENST00000392770 TAF7LQ5H9L4 462 aa20.71■□□□□ 0.91
SCN3B-202ENST00000392770 NUTM2GQ5VZR2 741 aa20.71■□□□□ 0.91
SCN3B-202ENST00000392770 RPGRIP1LQ68CZ1 1315 aa20.7■□□□□ 0.91
SCN3B-202ENST00000392770 ADAMTS12P58397 1594 aa20.7■□□□□ 0.9
SCN3B-202ENST00000392770 GORABQ5T7V8 394 aa20.7■□□□□ 0.9
SCN3B-202ENST00000392770 ANKRD45Q5TZF3 282 aa20.69■□□□□ 0.9
SCN3B-202ENST00000392770 CDK19Q9BWU1 502 aa20.69■□□□□ 0.9
SCN3B-202ENST00000392770 PLCB2Q00722 1185 aa20.69■□□□□ 0.9
SCN3B-202ENST00000392770 NCOA1Q15788 1441 aa20.69■□□□□ 0.9
SCN3B-202ENST00000392770 GOLGA6L4A6NEF3 574 aa20.69■□□□□ 0.9
SCN3B-202ENST00000392770 UGGT2Q9NYU1 1516 aa20.68■□□□□ 0.9
SCN3B-202ENST00000392770 EIF2S2P20042 333 aaKnown RBP20.68■□□□□ 0.9
SCN3B-202ENST00000392770 DZIP1LQ8IYY4 767 aaKnown RBP20.68■□□□□ 0.9
SCN3B-202ENST00000392770 SLC12A5Q9H2X9 1139 aa20.68■□□□□ 0.9
SCN3B-202ENST00000392770 DDX19BQ9UMR2 479 aa20.68■□□□□ 0.9
SCN3B-202ENST00000392770 NECTIN2Q92692 538 aa20.67■□□□□ 0.9
SCN3B-202ENST00000392770 ATF3P18847 181 aa20.67■□□□□ 0.9
SCN3B-202ENST00000392770 GNAI1P63096 354 aa20.66■□□□□ 0.9
SCN3B-202ENST00000392770 PDE4AP27815 886 aa20.66■□□□□ 0.9
SCN3B-202ENST00000392770 FAM161AQ3B820 660 aa20.66■□□□□ 0.9
SCN3B-202ENST00000392770 GPATCH8Q9UKJ3 1502 aaKnown RBP20.65■□□□□ 0.9
SCN3B-202ENST00000392770 CDK11BP21127 795 aaKnown RBP20.65■□□□□ 0.9
SCN3B-202ENST00000392770 TTC5Q8N0Z6 440 aa20.65■□□□□ 0.9
SCN3B-202ENST00000392770 ITSN2Q9NZM3 1697 aa20.64■□□□□ 0.9
SCN3B-202ENST00000392770 FAM135AQ9P2D6 1515 aa20.64■□□□□ 0.89
SCN3B-202ENST00000392770 GBP4Q96PP9 640 aa20.64■□□□□ 0.89
SCN3B-202ENST00000392770 FANCAO15360 1455 aa20.63■□□□□ 0.89
SCN3B-202ENST00000392770 NLRP6P59044 892 aa20.63■□□□□ 0.89
SCN3B-202ENST00000392770 KIAA0556O60303 1618 aa20.63■□□□□ 0.89
SCN3B-202ENST00000392770 CDCA7LQ96GN5 454 aa20.63■□□□□ 0.89
SCN3B-202ENST00000392770 TSPYL4Q9UJ04 414 aa20.63■□□□□ 0.89
SCN3B-202ENST00000392770 API5Q9BZZ5 524 aaKnown RBP20.63■□□□□ 0.89
SCN3B-202ENST00000392770 CABP1Q9NZU7 370 aa20.62■□□□□ 0.89
SCN3B-202ENST00000392770 TCP11L2Q8N4U5 519 aa20.62■□□□□ 0.89
SCN3B-202ENST00000392770 CFAP43Q8NDM7 1665 aa20.62■□□□□ 0.89
SCN3B-202ENST00000392770 NUP153P49790 1475 aaKnown RBP20.61■□□□□ 0.89
SCN3B-202ENST00000392770 THEMISQ8N1K5 641 aaPredicted RBP20.61■□□□□ 0.89
SCN3B-202ENST00000392770 RTEL1-TNFRSF6BF6WH68 1400 aa20.6■□□□□ 0.89
SCN3B-202ENST00000392770 KIF16BQ96L93 1317 aa20.6■□□□□ 0.89
SCN3B-202ENST00000392770 ESCO1Q5FWF5 840 aa20.59■□□□□ 0.89
SCN3B-202ENST00000392770 ATP10BO94823 1461 aa20.59■□□□□ 0.89
SCN3B-202ENST00000392770 DNTTIP2Q5QJE6 756 aaKnown RBP20.59■□□□□ 0.89
SCN3B-202ENST00000392770 FOXD4L1Q9NU39 408 aa20.59■□□□□ 0.89
SCN3B-202ENST00000392770 POGZQ7Z3K3 1410 aa20.59■□□□□ 0.89
SCN3B-202ENST00000392770 ABTB2Q8N961 1025 aa20.59■□□□□ 0.89
SCN3B-202ENST00000392770 GPRASP1Q5JY77 1395 aa20.58■□□□□ 0.89
SCN3B-202ENST00000392770 GNL2Q13823 731 aaKnown RBP20.58■□□□□ 0.89
SCN3B-202ENST00000392770 PANK1Q8TE04 598 aa20.58■□□□□ 0.89
SCN3B-202ENST00000392770 RILPL2Q969X0 211 aa20.58■□□□□ 0.89
SCN3B-202ENST00000392770 L1TD1Q5T7N2 865 aaKnown RBP20.58■□□□□ 0.88
SCN3B-202ENST00000392770 NOL8Q76FK4 1167 aaKnown RBP20.58■□□□□ 0.88
SCN3B-202ENST00000392770 PTMSP20962 102 aa20.58■□□□□ 0.88
SCN3B-202ENST00000392770 DEKP35659 375 aaKnown RBP20.58■□□□□ 0.88
SCN3B-202ENST00000392770 EIF4G3O43432 1585 aaKnown RBP20.57■□□□□ 0.88
SCN3B-202ENST00000392770 PBRM1Q86U86 1689 aa20.57■□□□□ 0.88
SCN3B-202ENST00000392770 PRKAR2BP31323 418 aa20.57■□□□□ 0.88
SCN3B-202ENST00000392770 CCDC184Q52MB2 194 aa20.56■□□□□ 0.88
SCN3B-202ENST00000392770 HSP90B1P14625 803 aaKnown RBP20.56■□□□□ 0.88
SCN3B-202ENST00000392770 FKBP5Q13451 457 aaPredicted RBP20.56■□□□□ 0.88
SCN3B-202ENST00000392770 RPRD2Q5VT52 1461 aaKnown RBP20.56■□□□□ 0.88
SCN3B-202ENST00000392770 PNISRQ8TF01 805 aaKnown RBP20.56■□□□□ 0.88
SCN3B-202ENST00000392770 PTPRKQ15262 1439 aa20.55■□□□□ 0.88
SCN3B-202ENST00000392770 NEXNQ0ZGT2 675 aa20.55■□□□□ 0.88
SCN3B-202ENST00000392770 C9orf78Q9NZ63 289 aaPredicted RBP20.55■□□□□ 0.88
SCN3B-202ENST00000392770 WDR62O43379 1518 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms