RNA–Protein interactions for RNA: ENST00000392169.6

SDHC-203, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-203ENST00000392169 RIMS2Q9UQ26 1411 aa10.18□□□□□ -0.78
SDHC-203ENST00000392169 NUTM2DQ5VT03 806 aaPredicted RBP10.18□□□□□ -0.78
SDHC-203ENST00000392169 TRIM52Q96A61 297 aa10.18□□□□□ -0.78
SDHC-203ENST00000392169 TMEM131LA2VDJ0 1609 aa10.18□□□□□ -0.78
SDHC-203ENST00000392169 DISP3Q9P2K9 1392 aa10.17□□□□□ -0.78
SDHC-203ENST00000392169 MYO5BQ9ULV0 1848 aa10.17□□□□□ -0.78
SDHC-203ENST00000392169 KCNA6P17658 529 aa10.17□□□□□ -0.78
SDHC-203ENST00000392169 HSPA1LP34931 641 aa10.17□□□□□ -0.78
SDHC-203ENST00000392169 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.17□□□□□ -0.78
SDHC-203ENST00000392169 ZFYVE9O95405 1425 aa10.16□□□□□ -0.78
SDHC-203ENST00000392169 PROSER2Q86WR7 435 aaPredicted RBP10.16□□□□□ -0.78
SDHC-203ENST00000392169 PLEKHG1Q9ULL1 1385 aa10.15□□□□□ -0.78
SDHC-203ENST00000392169 RBM33Q96EV2 1170 aaKnown RBP10.15□□□□□ -0.78
SDHC-203ENST00000392169 HFM1A2PYH4 1435 aa10.15□□□□□ -0.79
SDHC-203ENST00000392169 ZNF326Q5BKZ1 582 aaKnown RBP10.14□□□□□ -0.79
SDHC-203ENST00000392169 TBX22Q9Y458 520 aa10.14□□□□□ -0.79
SDHC-203ENST00000392169 TMEM94Q12767 1356 aa10.14□□□□□ -0.79
SDHC-203ENST00000392169 SLC4A1APQ9BWU0 796 aaKnown RBP10.13□□□□□ -0.79
SDHC-203ENST00000392169 ALKQ9UM73 1620 aa10.13□□□□□ -0.79
SDHC-203ENST00000392169 SPHKAPQ2M3C7 1700 aa10.13□□□□□ -0.79
SDHC-203ENST00000392169 XIRP1Q702N8 1843 aaKnown RBP10.12□□□□□ -0.79
SDHC-203ENST00000392169 ADAMTS13Q76LX8 1427 aa10.1□□□□□ -0.79
SDHC-203ENST00000392169 NKTRP30414 1462 aaKnown RBP10.1□□□□□ -0.79
SDHC-203ENST00000392169 FOXD1Q16676 465 aa10.09□□□□□ -0.79
SDHC-203ENST00000392169 ILDR2Q71H61 639 aa10.09□□□□□ -0.79
SDHC-203ENST00000392169 MSH6P52701 1360 aa10.09□□□□□ -0.79
SDHC-203ENST00000392169 CHD2O14647 1828 aaKnown RBP10.09□□□□□ -0.79
SDHC-203ENST00000392169 NWD1Q149M9 1564 aa10.09□□□□□ -0.79
SDHC-203ENST00000392169 TRPM2O94759 1503 aa10.08□□□□□ -0.8
SDHC-203ENST00000392169 CLTCL1P53675 1640 aa10.08□□□□□ -0.8
SDHC-203ENST00000392169 C14orf37Q86TY3 774 aa10.08□□□□□ -0.8
SDHC-203ENST00000392169 AMOTL2Q9Y2J4 779 aa10.08□□□□□ -0.8
SDHC-203ENST00000392169 DIP2AQ14689 1571 aa10.07□□□□□ -0.8
SDHC-203ENST00000392169 PIK3R4Q99570 1358 aa10.07□□□□□ -0.8
SDHC-203ENST00000392169 FAM135BQ49AJ0 1406 aa10.07□□□□□ -0.8
SDHC-203ENST00000392169 KIF1BO60333 1816 aa10.06□□□□□ -0.8
SDHC-203ENST00000392169 MPHOSPH9Q99550 1183 aa10.06□□□□□ -0.8
SDHC-203ENST00000392169 SLAIN2Q9P270 581 aa10.06□□□□□ -0.8
SDHC-203ENST00000392169 VGFO15240 615 aaPredicted RBP10.05□□□□□ -0.8
SDHC-203ENST00000392169 C19orf44Q9H6X5 657 aa10.05□□□□□ -0.8
SDHC-203ENST00000392169 PTPRUQ92729 1446 aa10.05□□□□□ -0.8
SDHC-203ENST00000392169 METP08581 1390 aa10.04□□□□□ -0.8
SDHC-203ENST00000392169 NEXMIFQ5QGS0 1516 aa10.04□□□□□ -0.8
SDHC-203ENST00000392169 ATF3P18847 181 aa10.04□□□□□ -0.8
SDHC-203ENST00000392169 SETD5Q9C0A6 1442 aa10.04□□□□□ -0.8
SDHC-203ENST00000392169 NCOA3Q9Y6Q9 1424 aa10.04□□□□□ -0.8
SDHC-203ENST00000392169 SETBP1Q9Y6X0 1596 aa10.04□□□□□ -0.8
SDHC-203ENST00000392169 RPGRIP1LQ68CZ1 1315 aa10.04□□□□□ -0.8
SDHC-203ENST00000392169 NRXN3Q9Y4C0 1643 aa10.04□□□□□ -0.8
SDHC-203ENST00000392169 RGL3Q3MIN7 710 aa10.03□□□□□ -0.8
SDHC-203ENST00000392169 CADPS2Q86UW7 1296 aa10.03□□□□□ -0.8
SDHC-203ENST00000392169 ACIN1Q9UKV3 1341 aaKnown RBP10.03□□□□□ -0.8
SDHC-203ENST00000392169 ROBO1Q9Y6N7 1651 aa10.02□□□□□ -0.8
SDHC-203ENST00000392169 MED1Q15648 1581 aaPredicted RBP10.02□□□□□ -0.81
SDHC-203ENST00000392169 CCDC144AA2RUR9 1427 aa10.02□□□□□ -0.81
SDHC-203ENST00000392169 PHF23Q9BUL5 403 aaPredicted RBP10.02□□□□□ -0.81
SDHC-203ENST00000392169 SIPA1L2Q9P2F8 1722 aaPredicted RBP10□□□□□ -0.81
SDHC-203ENST00000392169 SOCS7O14512 581 aa10□□□□□ -0.81
SDHC-203ENST00000392169 RAB3GAP2Q9H2M9 1393 aa10□□□□□ -0.81
SDHC-203ENST00000392169 XRN1Q8IZH2 1706 aaKnown RBP9.99□□□□□ -0.81
SDHC-203ENST00000392169 ADGRF5Q8IZF2 1346 aa9.98□□□□□ -0.81
SDHC-203ENST00000392169 PPLO60437 1756 aa9.97□□□□□ -0.81
SDHC-203ENST00000392169 SPATA31E1Q6ZUB1 1445 aa9.97□□□□□ -0.81
SDHC-203ENST00000392169 PHLPP1O60346 1717 aa9.96□□□□□ -0.81
SDHC-203ENST00000392169 BRINP3Q76B58 766 aa9.96□□□□□ -0.82
SDHC-203ENST00000392169 ANKRD30BQ9BXX2 1392 aa9.96□□□□□ -0.82
SDHC-203ENST00000392169 DCCP43146 1447 aa9.96□□□□□ -0.82
SDHC-203ENST00000392169 ROBO2Q9HCK4 1378 aa9.95□□□□□ -0.82
SDHC-203ENST00000392169 JCADQ9P266 1359 aa9.95□□□□□ -0.82
SDHC-203ENST00000392169 ADGRL3Q9HAR2 1447 aa9.95□□□□□ -0.82
SDHC-203ENST00000392169 SETD1AO15047 1707 aaKnown RBP9.94□□□□□ -0.82
SDHC-203ENST00000392169 PTCH1Q13635 1447 aa9.94□□□□□ -0.82
SDHC-203ENST00000392169 TMEM132EQ6IEE7 984 aa9.94□□□□□ -0.82
SDHC-203ENST00000392169 STK26Q9P289 416 aa9.94□□□□□ -0.82
SDHC-203ENST00000392169 RGS17Q9UGC6 210 aaPredicted RBP9.94□□□□□ -0.82
SDHC-203ENST00000392169 MST1RQ04912 1400 aa9.93□□□□□ -0.82
SDHC-203ENST00000392169 HRCP23327 699 aa9.93□□□□□ -0.82
SDHC-203ENST00000392169 WAPLQ7Z5K2 1190 aa9.92□□□□□ -0.82
SDHC-203ENST00000392169 COL16A1Q07092 1604 aaPredicted RBP9.92□□□□□ -0.82
SDHC-203ENST00000392169 AHDC1Q5TGY3 1603 aaPredicted RBP9.92□□□□□ -0.82
SDHC-203ENST00000392169 NALCNQ8IZF0 1738 aa9.91□□□□□ -0.82
SDHC-203ENST00000392169 IFT172Q9UG01 1749 aa9.91□□□□□ -0.82
SDHC-203ENST00000392169 DDX17Q92841 729 aaKnown RBP9.91□□□□□ -0.82
SDHC-203ENST00000392169 ASXL1Q8IXJ9 1541 aa9.91□□□□□ -0.82
SDHC-203ENST00000392169 PIK3C2GO75747 1445 aa9.9□□□□□ -0.82
SDHC-203ENST00000392169 PRAG1Q86YV5 1406 aa9.9□□□□□ -0.82
SDHC-203ENST00000392169 SPATA31A6Q5VVP1 1343 aa9.9□□□□□ -0.82
SDHC-203ENST00000392169 CFAP70Q5T0N1 1121 aa9.9□□□□□ -0.82
SDHC-203ENST00000392169 MEX3CQ5U5Q3 659 aaKnown RBP9.9□□□□□ -0.82
SDHC-203ENST00000392169 LRRC59Q96AG4 307 aaKnown RBP9.9□□□□□ -0.82
SDHC-203ENST00000392169 ORAI2Q96SN7 254 aa9.9□□□□□ -0.82
SDHC-203ENST00000392169 C14orf93Q9H972 538 aaKnown RBP9.9□□□□□ -0.82
SDHC-203ENST00000392169 KDM2AQ9Y2K7 1162 aa9.9□□□□□ -0.82
SDHC-203ENST00000392169 C1orf167Q5SNV9 1468 aa9.9□□□□□ -0.83
SDHC-203ENST00000392169 LRPPRCP42704 1394 aaKnown RBP9.89□□□□□ -0.83
SDHC-203ENST00000392169 NUTM2BA6NNL0 878 aaPredicted RBP9.89□□□□□ -0.83
SDHC-203ENST00000392169 NUTM2EB1AL46 878 aaPredicted RBP9.89□□□□□ -0.83
SDHC-203ENST00000392169 POTEAQ6S8J7 498 aa9.89□□□□□ -0.83
SDHC-203ENST00000392169 NUTM2AQ8IVF1 878 aaPredicted RBP9.89□□□□□ -0.83
SDHC-203ENST00000392169 ABCC11Q96J66 1382 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms