RNA–Protein interactions for RNA: ENST00000390488.1

TRAJ49-201, Transcript of T cell receptor alpha joining 49, humanhuman

APPRIS P1 BASIC

Gene TRAJ49, Length 56 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ49-201ENST00000390488 PMFBP1Q8TBY8 1022 aa2.57□□□□□ -2
TRAJ49-201ENST00000390488 BACH2Q9BYV9 841 aa2.57□□□□□ -2
TRAJ49-201ENST00000390488 CIZ1Q9ULV3 898 aaPredicted RBP2.57□□□□□ -2
TRAJ49-201ENST00000390488 POLR3AO14802 1390 aaPredicted RBP2.57□□□□□ -2
TRAJ49-201ENST00000390488 ABCC11Q96J66 1382 aa2.57□□□□□ -2
TRAJ49-201ENST00000390488 PLA2R1Q13018 1463 aa2.57□□□□□ -2
TRAJ49-201ENST00000390488 ABCC1P33527 1531 aa2.57□□□□□ -2
TRAJ49-201ENST00000390488 KDM5AP29375 1690 aaKnown RBP2.57□□□□□ -2
TRAJ49-201ENST00000390488 IQGAP1P46940 1657 aa2.57□□□□□ -2
TRAJ49-201ENST00000390488 SPHKAPQ2M3C7 1700 aa2.56□□□□□ -2
TRAJ49-201ENST00000390488 VIRMAQ69YN4 1812 aaKnown RBP2.56□□□□□ -2
TRAJ49-201ENST00000390488 TERF1P54274 439 aa2.56□□□□□ -2
TRAJ49-201ENST00000390488 GOLGA2Q08379 1002 aa2.56□□□□□ -2
TRAJ49-201ENST00000390488 WDR43Q15061 677 aaKnown RBP eCLIP2.56□□□□□ -2
TRAJ49-201ENST00000390488 SKOR2Q2VWA4 1001 aaPredicted RBP2.56□□□□□ -2
TRAJ49-201ENST00000390488 ANP32BQ92688 251 aaKnown RBP2.56□□□□□ -2
TRAJ49-201ENST00000390488 MAP7D2Q96T17 732 aa2.56□□□□□ -2
TRAJ49-201ENST00000390488 ATP1B4Q9UN42 357 aaPredicted RBP2.56□□□□□ -2
TRAJ49-201ENST00000390488 RPGRIP1LQ68CZ1 1315 aa2.56□□□□□ -2
TRAJ49-201ENST00000390488 PLCH2O75038 1416 aa2.56□□□□□ -2
TRAJ49-201ENST00000390488 A2MP01023 1474 aa2.56□□□□□ -2
TRAJ49-201ENST00000390488 NRXN1Q9ULB1 1477 aa2.56□□□□□ -2
TRAJ49-201ENST00000390488 FRMPD1Q5SYB0 1578 aa2.56□□□□□ -2
TRAJ49-201ENST00000390488 VWDEQ8N2E2 1590 aa2.56□□□□□ -2
TRAJ49-201ENST00000390488 UGGT1Q9NYU2 1555 aa2.56□□□□□ -2
TRAJ49-201ENST00000390488 MADDQ8WXG6 1647 aa2.56□□□□□ -2
TRAJ49-201ENST00000390488 CEP152O94986 1710 aa2.56□□□□□ -2
TRAJ49-201ENST00000390488 GOLGA6L22H0YM25 854 aa2.55□□□□□ -2
TRAJ49-201ENST00000390488 EPB41L2O43491 1005 aaKnown RBP2.55□□□□□ -2
TRAJ49-201ENST00000390488 ATP10BO94823 1461 aa2.55□□□□□ -2
TRAJ49-201ENST00000390488 ZFYVE9O95405 1425 aa2.55□□□□□ -2
TRAJ49-201ENST00000390488 PDE4AP27815 886 aa2.55□□□□□ -2
TRAJ49-201ENST00000390488 RANGAP1P46060 587 aaPredicted RBP2.55□□□□□ -2
TRAJ49-201ENST00000390488 CALD1Q05682 793 aaKnown RBP2.55□□□□□ -2
TRAJ49-201ENST00000390488 ARHGAP5Q13017 1502 aa2.55□□□□□ -2
TRAJ49-201ENST00000390488 PKD2Q13563 968 aa2.55□□□□□ -2
TRAJ49-201ENST00000390488 HS1BP3Q53T59 392 aa2.55□□□□□ -2
TRAJ49-201ENST00000390488 ZC3H13Q5T200 1668 aaKnown RBP2.55□□□□□ -2
TRAJ49-201ENST00000390488 PLPPR3Q6T4P5 718 aa2.55□□□□□ -2
TRAJ49-201ENST00000390488 ZFYVE16Q7Z3T8 1539 aa2.55□□□□□ -2
TRAJ49-201ENST00000390488 FAM9BQ8IZU0 186 aa2.55□□□□□ -2
TRAJ49-201ENST00000390488 KDM2BQ8NHM5 1336 aa2.55□□□□□ -2
TRAJ49-201ENST00000390488 ARHGEF40Q8TER5 1519 aa2.55□□□□□ -2
TRAJ49-201ENST00000390488 BCANQ96GW7 911 aa2.55□□□□□ -2
TRAJ49-201ENST00000390488 ZNF521Q96K83 1311 aa2.55□□□□□ -2
TRAJ49-201ENST00000390488 RRP7BPQ9NSQ0 103 aa2.55□□□□□ -2
TRAJ49-201ENST00000390488 INO80Q9ULG1 1556 aaPredicted RBP2.55□□□□□ -2
TRAJ49-201ENST00000390488 KNSTRNQ9Y448 316 aa2.55□□□□□ -2
TRAJ49-201ENST00000390488 KDM6BO15054 1643 aa2.54□□□□□ -2
TRAJ49-201ENST00000390488 ABCA9Q8IUA7 1624 aa2.54□□□□□ -2
TRAJ49-201ENST00000390488 EFCAB6Q5THR3 1501 aa2.54□□□□□ -2
TRAJ49-201ENST00000390488 SYCP2Q9BX26 1530 aa2.54□□□□□ -2
TRAJ49-201ENST00000390488 ZNF518AQ6AHZ1 1483 aa2.54□□□□□ -2
TRAJ49-201ENST00000390488 PLB1Q6P1J6 1458 aa2.54□□□□□ -2
TRAJ49-201ENST00000390488 PPIP5K1Q6PFW1 1433 aa2.54□□□□□ -2
TRAJ49-201ENST00000390488 PRG4Q92954 1404 aaPredicted RBP2.54□□□□□ -2
TRAJ49-201ENST00000390488 KIF24Q5T7B8 1368 aa2.54□□□□□ -2
TRAJ49-201ENST00000390488 ANKRD36BQ8N2N9 1353 aa2.54□□□□□ -2
TRAJ49-201ENST00000390488 PLEKHH1Q9ULM0 1364 aa2.54□□□□□ -2
TRAJ49-201ENST00000390488 IL16Q14005 1332 aa2.54□□□□□ -2
TRAJ49-201ENST00000390488 CENPJQ9HC77 1338 aaPredicted RBP2.54□□□□□ -2
TRAJ49-201ENST00000390488 PER1O15534 1290 aaPredicted RBP2.54□□□□□ -2
TRAJ49-201ENST00000390488 MSH5O43196 834 aa2.54□□□□□ -2
TRAJ49-201ENST00000390488 RRP9O43818 475 aaKnown RBP2.54□□□□□ -2
TRAJ49-201ENST00000390488 NCLP19338 710 aaKnown RBP2.54□□□□□ -2
TRAJ49-201ENST00000390488 B4GALNT3Q6L9W6 998 aa2.54□□□□□ -2
TRAJ49-201ENST00000390488 WDR63Q8IWG1 891 aa2.54□□□□□ -2
TRAJ49-201ENST00000390488 UBE2Q2Q8WVN8 375 aa2.54□□□□□ -2
TRAJ49-201ENST00000390488 CFAP53Q96M91 514 aa2.54□□□□□ -2
TRAJ49-201ENST00000390488 GBP4Q96PP9 640 aa2.54□□□□□ -2
TRAJ49-201ENST00000390488 CHMP4AQ9BY43 222 aa2.54□□□□□ -2
TRAJ49-201ENST00000390488 MYH16Q9H6N6 1097 aa2.54□□□□□ -2
TRAJ49-201ENST00000390488 PPRC1Q5VV67 1664 aaKnown RBP2.53□□□□□ -2
TRAJ49-201ENST00000390488 MROH1Q8NDA8 1641 aa2.53□□□□□ -2
TRAJ49-201ENST00000390488 MAP3K4Q9Y6R4 1608 aa2.53□□□□□ -2
TRAJ49-201ENST00000390488 ADGRB2O60241 1585 aa2.53□□□□□ -2
TRAJ49-201ENST00000390488 HECW2Q9P2P5 1572 aa2.53□□□□□ -2
TRAJ49-201ENST00000390488 ADGRB3O60242 1522 aa2.53□□□□□ -2
TRAJ49-201ENST00000390488 ERVK-7P63135 1459 aa2.53□□□□□ -2
TRAJ49-201ENST00000390488 ARHGAP31Q2M1Z3 1444 aa2.53□□□□□ -2
TRAJ49-201ENST00000390488 MCM5P33992 734 aa2.53□□□□□ -2
TRAJ49-201ENST00000390488 MRE11P49959 708 aa2.53□□□□□ -2
TRAJ49-201ENST00000390488 BRPF1P55201 1214 aaPredicted RBP2.53□□□□□ -2
TRAJ49-201ENST00000390488 NBPF8Q3BBV2 869 aa2.53□□□□□ -2
TRAJ49-201ENST00000390488 EFCAB2Q5VUJ9 269 aa2.53□□□□□ -2
TRAJ49-201ENST00000390488 TRMT2AQ8IZ69 625 aaKnown RBP2.53□□□□□ -2
TRAJ49-201ENST00000390488 CHMP7Q8WUX9 453 aaPredicted RBP2.53□□□□□ -2
TRAJ49-201ENST00000390488 CLUAP1Q96AJ1 413 aa2.53□□□□□ -2
TRAJ49-201ENST00000390488 KCNH8Q96L42 1107 aa2.53□□□□□ -2
TRAJ49-201ENST00000390488 TESK2Q96S53 571 aa2.53□□□□□ -2
TRAJ49-201ENST00000390488 CDC42BPBQ9Y5S2 1711 aa2.53□□□□□ -2
TRAJ49-201ENST00000390488 CLTCL1P53675 1640 aa2.53□□□□□ -2
TRAJ49-201ENST00000390488 CDC42BPGQ6DT37 1551 aa2.53□□□□□ -2.01
TRAJ49-201ENST00000390488 ATP7AQ04656 1500 aa2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 NEXMIFQ5QGS0 1516 aa2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 IQSEC2Q5JU85 1478 aa2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 FAM135BQ49AJ0 1406 aa2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 TRAPPC8Q9Y2L5 1435 aa2.52□□□□□ -2.01
TRAJ49-201ENST00000390488 NCOA3Q9Y6Q9 1424 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms