RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 UPF1Q92900 1129 aaKnown RBP eCLIP9.7□□□□□ -0.86
TRAV35-201ENST00000390462 TBC1D2BQ9UPU7 963 aa9.7□□□□□ -0.86
TRAV35-201ENST00000390462 GNEQ9Y223 722 aaKnown RBP9.69□□□□□ -0.86
TRAV35-201ENST00000390462 GABBR2O75899 941 aa9.68□□□□□ -0.86
TRAV35-201ENST00000390462 TBC1D2Q9BYX2 928 aa9.68□□□□□ -0.86
TRAV35-201ENST00000390462 KIAA1522Q9P206 1035 aaPredicted RBP9.68□□□□□ -0.86
TRAV35-201ENST00000390462 SEC24BO95487 1268 aa9.67□□□□□ -0.86
TRAV35-201ENST00000390462 CANXP27824 592 aaKnown RBP9.67□□□□□ -0.86
TRAV35-201ENST00000390462 DIXDC1Q155Q3 683 aa9.67□□□□□ -0.86
TRAV35-201ENST00000390462 MRRFQ96E11 262 aaKnown RBP9.67□□□□□ -0.86
TRAV35-201ENST00000390462 PPP1R12CQ9BZL4 782 aa9.67□□□□□ -0.86
TRAV35-201ENST00000390462 COLQQ9Y215 455 aaPredicted RBP9.67□□□□□ -0.86
TRAV35-201ENST00000390462 TMEM88BA6NKF7 163 aa9.66□□□□□ -0.86
TRAV35-201ENST00000390462 ADAMTS19Q8TE59 1207 aa9.66□□□□□ -0.86
TRAV35-201ENST00000390462 PPM1GO15355 546 aaPredicted RBP9.65□□□□□ -0.86
TRAV35-201ENST00000390462 TXNDC2Q86VQ3 553 aa9.65□□□□□ -0.86
TRAV35-201ENST00000390462 LIMD1Q9UGP4 676 aa9.65□□□□□ -0.86
TRAV35-201ENST00000390462 DCBLD2Q96PD2 775 aa9.64□□□□□ -0.87
TRAV35-201ENST00000390462 ERCC3P19447 782 aa9.63□□□□□ -0.87
TRAV35-201ENST00000390462 SLC39A7Q92504 469 aa9.63□□□□□ -0.87
TRAV35-201ENST00000390462 ATG7O95352 703 aa9.62□□□□□ -0.87
TRAV35-201ENST00000390462 POTEHQ6S545 545 aa9.62□□□□□ -0.87
TRAV35-201ENST00000390462 NPDC1Q9NQX5 325 aaPredicted RBP9.62□□□□□ -0.87
TRAV35-201ENST00000390462 POTEFA5A3E0 1075 aa9.61□□□□□ -0.87
TRAV35-201ENST00000390462 EVI5O60447 810 aa9.61□□□□□ -0.87
TRAV35-201ENST00000390462 LMOD1P29536 600 aaPredicted RBP9.61□□□□□ -0.87
TRAV35-201ENST00000390462 B4GALNT3Q6L9W6 998 aa9.61□□□□□ -0.87
TRAV35-201ENST00000390462 RIC3Q7Z5B4 369 aa9.61□□□□□ -0.87
TRAV35-201ENST00000390462 DRC1Q96MC2 740 aa9.61□□□□□ -0.87
TRAV35-201ENST00000390462 PALM3A6NDB9 673 aaPredicted RBP9.6□□□□□ -0.87
TRAV35-201ENST00000390462 WASHC4Q2M389 1173 aa9.6□□□□□ -0.87
TRAV35-201ENST00000390462 C7P10643 843 aa9.59□□□□□ -0.87
TRAV35-201ENST00000390462 TUSC1Q2TAM9 212 aa9.59□□□□□ -0.87
TRAV35-201ENST00000390462 PTCD2Q8WV60 388 aaKnown RBP9.59□□□□□ -0.87
TRAV35-201ENST00000390462 CDHR5Q9HBB8 845 aa9.59□□□□□ -0.87
TRAV35-201ENST00000390462 DNAJC14Q6Y2X3 702 aaPredicted RBP9.58□□□□□ -0.88
TRAV35-201ENST00000390462 CCER1Q8TC90 406 aaPredicted RBP9.58□□□□□ -0.88
TRAV35-201ENST00000390462 NLRP7Q8WX94 980 aa9.58□□□□□ -0.88
TRAV35-201ENST00000390462 AP1G2O75843 785 aa9.57□□□□□ -0.88
TRAV35-201ENST00000390462 TCF3P15923 654 aa9.57□□□□□ -0.88
TRAV35-201ENST00000390462 ZNF16P17020 682 aaPredicted RBP9.57□□□□□ -0.88
TRAV35-201ENST00000390462 C3orf67Q6ZVT6 689 aa9.57□□□□□ -0.88
TRAV35-201ENST00000390462 METTL3Q86U44 580 aaKnown RBP9.57□□□□□ -0.88
TRAV35-201ENST00000390462 ZNF710Q8N1W2 664 aa9.57□□□□□ -0.88
TRAV35-201ENST00000390462 SIRT1Q96EB6 747 aa9.57□□□□□ -0.88
TRAV35-201ENST00000390462 NDUFB9Q9Y6M9 179 aa9.57□□□□□ -0.88
TRAV35-201ENST00000390462 OATP04181 439 aa9.56□□□□□ -0.88
TRAV35-201ENST00000390462 CDCA8Q53HL2 280 aa9.56□□□□□ -0.88
TRAV35-201ENST00000390462 SREK1Q8WXA9 508 aaKnown RBP9.56□□□□□ -0.88
TRAV35-201ENST00000390462 C8orf37Q96NL8 207 aa9.56□□□□□ -0.88
TRAV35-201ENST00000390462 POLR3GLQ9BT43 218 aa9.56□□□□□ -0.88
TRAV35-201ENST00000390462 METRNQ9UJH8 293 aa9.56□□□□□ -0.88
TRAV35-201ENST00000390462 SLC34A2O95436 690 aa9.55□□□□□ -0.88
TRAV35-201ENST00000390462 SPATA32Q96LK8 384 aa9.55□□□□□ -0.88
TRAV35-201ENST00000390462 TFIP11Q9UBB9 837 aaKnown RBP9.55□□□□□ -0.88
TRAV35-201ENST00000390462 SPTLC1O15269 473 aa9.54□□□□□ -0.88
TRAV35-201ENST00000390462 SMARCA5O60264 1052 aaPredicted RBP9.54□□□□□ -0.88
TRAV35-201ENST00000390462 ALG2Q9H553 416 aa9.54□□□□□ -0.88
TRAV35-201ENST00000390462 ANO8Q9HCE9 1232 aaPredicted RBP9.54□□□□□ -0.88
TRAV35-201ENST00000390462 USP17L8P0C7I0 530 aa9.53□□□□□ -0.88
TRAV35-201ENST00000390462 SPIRE2Q8WWL2 714 aa9.53□□□□□ -0.88
TRAV35-201ENST00000390462 BCL2L13Q9BXK5 485 aa9.53□□□□□ -0.88
TRAV35-201ENST00000390462 FAM161AQ3B820 660 aa9.52□□□□□ -0.89
TRAV35-201ENST00000390462 GJD4Q96KN9 370 aaPredicted RBP9.52□□□□□ -0.89
TRAV35-201ENST00000390462 EN1Q05925 392 aaPredicted RBP9.51□□□□□ -0.89
TRAV35-201ENST00000390462 TSR1Q2NL82 804 aaKnown RBP9.51□□□□□ -0.89
TRAV35-201ENST00000390462 CCDC180Q9P1Z9 1646 aa9.5□□□□□ -0.89
TRAV35-201ENST00000390462 VAC14Q08AM6 782 aa9.5□□□□□ -0.89
TRAV35-201ENST00000390462 CSPP1Q1MSJ5 1256 aa9.5□□□□□ -0.89
TRAV35-201ENST00000390462 RSBN1LQ6PCB5 846 aaPredicted RBP9.5□□□□□ -0.89
TRAV35-201ENST00000390462 PXYLP1Q8TE99 480 aa9.5□□□□□ -0.89
TRAV35-201ENST00000390462 UCN2Q96RP3 112 aa9.5□□□□□ -0.89
TRAV35-201ENST00000390462 LILRB3O75022 631 aa9.49□□□□□ -0.89
TRAV35-201ENST00000390462 PHF14O94880 888 aa9.49□□□□□ -0.89
TRAV35-201ENST00000390462 POTEIP0CG38 1075 aa9.49□□□□□ -0.89
TRAV35-201ENST00000390462 QPCTQ16769 361 aa9.49□□□□□ -0.89
TRAV35-201ENST00000390462 NOM1Q5C9Z4 860 aaKnown RBP9.49□□□□□ -0.89
TRAV35-201ENST00000390462 EPAS1Q99814 870 aa9.49□□□□□ -0.89
TRAV35-201ENST00000390462 CADPSQ9ULU8 1353 aa9.49□□□□□ -0.89
TRAV35-201ENST00000390462 MAP3K7O43318 606 aa9.48□□□□□ -0.89
TRAV35-201ENST00000390462 RTL5Q5HYW3 569 aaPredicted RBP9.48□□□□□ -0.89
TRAV35-201ENST00000390462 GIPC2Q8TF65 315 aa9.48□□□□□ -0.89
TRAV35-201ENST00000390462 MAFBQ9Y5Q3 323 aaPredicted RBP9.48□□□□□ -0.89
TRAV35-201ENST00000390462 NCLP19338 710 aaKnown RBP9.47□□□□□ -0.89
TRAV35-201ENST00000390462 ZC3H6P61129 1189 aaKnown RBP9.46□□□□□ -0.9
TRAV35-201ENST00000390462 CWC22Q9HCG8 908 aaKnown RBP9.46□□□□□ -0.9
TRAV35-201ENST00000390462 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.46□□□□□ -0.9
TRAV35-201ENST00000390462 ADGRG1Q9Y653 693 aa9.46□□□□□ -0.9
TRAV35-201ENST00000390462 GPR37L1O60883 481 aa9.45□□□□□ -0.9
TRAV35-201ENST00000390462 ARID4AP29374 1257 aaPredicted RBP9.45□□□□□ -0.9
TRAV35-201ENST00000390462 ELOAQ14241 798 aaKnown RBP9.45□□□□□ -0.9
TRAV35-201ENST00000390462 PHLDB3Q6NSJ2 640 aa9.45□□□□□ -0.9
TRAV35-201ENST00000390462 UBXN4Q92575 508 aa9.45□□□□□ -0.9
TRAV35-201ENST00000390462 PCDHGA4Q9Y5G9 962 aa9.45□□□□□ -0.9
TRAV35-201ENST00000390462 PCDHGA10Q9Y5H3 936 aa9.45□□□□□ -0.9
TRAV35-201ENST00000390462 VAMP1P23763 118 aa9.44□□□□□ -0.9
TRAV35-201ENST00000390462 SOX11P35716 441 aa9.44□□□□□ -0.9
TRAV35-201ENST00000390462 GJA5P36382 358 aa9.44□□□□□ -0.9
TRAV35-201ENST00000390462 TYW1BQ6NUM6 668 aa9.44□□□□□ -0.9
TRAV35-201ENST00000390462 ANKRD13AQ8IZ07 590 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms