RNA–Protein interactions for RNA: ENST00000390457.2

TRAV27-201, Transcript of T cell receptor alpha variable 27, humanhuman

APPRIS P1 BASIC

Gene TRAV27, Length 425 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27-201ENST00000390457 TMEM94Q12767 1356 aa11.04□□□□□ -0.64
TRAV27-201ENST00000390457 KANK1Q14678 1352 aa11.03□□□□□ -0.64
TRAV27-201ENST00000390457 ANKRD30AQ9BXX3 1397 aa11.03□□□□□ -0.64
TRAV27-201ENST00000390457 CHIC2Q9UKJ5 165 aa11.03□□□□□ -0.64
TRAV27-201ENST00000390457 ADGRL2O95490 1459 aa11.03□□□□□ -0.64
TRAV27-201ENST00000390457 SLC26A8Q96RN1 970 aa11.01□□□□□ -0.65
TRAV27-201ENST00000390457 SLC52A1Q9NWF4 448 aa11.01□□□□□ -0.65
TRAV27-201ENST00000390457 ADGRB3O60242 1522 aa11□□□□□ -0.65
TRAV27-201ENST00000390457 NWD1Q149M9 1564 aa11□□□□□ -0.65
TRAV27-201ENST00000390457 STAG3Q9UJ98 1225 aa11□□□□□ -0.65
TRAV27-201ENST00000390457 ZFYVE9O95405 1425 aa11□□□□□ -0.65
TRAV27-201ENST00000390457 NKTRP30414 1462 aaKnown RBP11□□□□□ -0.65
TRAV27-201ENST00000390457 PROSER2Q86WR7 435 aaPredicted RBP10.99□□□□□ -0.65
TRAV27-201ENST00000390457 RBM33Q96EV2 1170 aaKnown RBP10.99□□□□□ -0.65
TRAV27-201ENST00000390457 RPRD2Q5VT52 1461 aaKnown RBP10.99□□□□□ -0.65
TRAV27-201ENST00000390457 APLP2Q06481 763 aa10.98□□□□□ -0.65
TRAV27-201ENST00000390457 POTEAQ6S8J7 498 aa10.98□□□□□ -0.65
TRAV27-201ENST00000390457 ROBO1Q9Y6N7 1651 aa10.98□□□□□ -0.65
TRAV27-201ENST00000390457 PLEKHG1Q9ULL1 1385 aa10.97□□□□□ -0.65
TRAV27-201ENST00000390457 ANKRD50Q9ULJ7 1429 aa10.97□□□□□ -0.65
TRAV27-201ENST00000390457 CHD2O14647 1828 aaKnown RBP10.96□□□□□ -0.65
TRAV27-201ENST00000390457 SLAIN2Q9P270 581 aa10.95□□□□□ -0.66
TRAV27-201ENST00000390457 TBX22Q9Y458 520 aa10.95□□□□□ -0.66
TRAV27-201ENST00000390457 MYO5BQ9ULV0 1848 aa10.95□□□□□ -0.66
TRAV27-201ENST00000390457 TMEM131LA2VDJ0 1609 aa10.95□□□□□ -0.66
TRAV27-201ENST00000390457 RIMS2Q9UQ26 1411 aa10.94□□□□□ -0.66
TRAV27-201ENST00000390457 ADAMTS13Q76LX8 1427 aa10.93□□□□□ -0.66
TRAV27-201ENST00000390457 NCOA3Q9Y6Q9 1424 aa10.93□□□□□ -0.66
TRAV27-201ENST00000390457 MSH6P52701 1360 aa10.93□□□□□ -0.66
TRAV27-201ENST00000390457 GCC2Q8IWJ2 1684 aa10.92□□□□□ -0.66
TRAV27-201ENST00000390457 JCADQ9P266 1359 aa10.91□□□□□ -0.66
TRAV27-201ENST00000390457 UNC13BO14795 1591 aa10.91□□□□□ -0.66
TRAV27-201ENST00000390457 HDGFP51858 240 aaKnown RBP10.91□□□□□ -0.66
TRAV27-201ENST00000390457 FAM50AQ14320 339 aaKnown RBP10.91□□□□□ -0.66
TRAV27-201ENST00000390457 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.9□□□□□ -0.66
TRAV27-201ENST00000390457 COL16A1Q07092 1604 aaPredicted RBP10.9□□□□□ -0.66
TRAV27-201ENST00000390457 ROCK1Q13464 1354 aa10.9□□□□□ -0.67
TRAV27-201ENST00000390457 PIK3R4Q99570 1358 aa10.9□□□□□ -0.67
TRAV27-201ENST00000390457 PHLPP1O60346 1717 aa10.89□□□□□ -0.67
TRAV27-201ENST00000390457 E9PCH4 1651 aa10.89□□□□□ -0.67
TRAV27-201ENST00000390457 BCANQ96GW7 911 aa10.89□□□□□ -0.67
TRAV27-201ENST00000390457 PTPRUQ92729 1446 aa10.88□□□□□ -0.67
TRAV27-201ENST00000390457 C19orf44Q9H6X5 657 aa10.88□□□□□ -0.67
TRAV27-201ENST00000390457 LRP6O75581 1613 aa10.87□□□□□ -0.67
TRAV27-201ENST00000390457 IQGAP3Q86VI3 1631 aa10.87□□□□□ -0.67
TRAV27-201ENST00000390457 DIP2AQ14689 1571 aa10.87□□□□□ -0.67
TRAV27-201ENST00000390457 PPP1R15AO75807 674 aaPredicted RBP10.87□□□□□ -0.67
TRAV27-201ENST00000390457 AHDC1Q5TGY3 1603 aaPredicted RBP10.87□□□□□ -0.67
TRAV27-201ENST00000390457 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.87□□□□□ -0.67
TRAV27-201ENST00000390457 SRCAPQ6ZRS2 3230 aa10.86□□□□□ -0.67
TRAV27-201ENST00000390457 NUTM2DQ5VT03 806 aaPredicted RBP10.86□□□□□ -0.67
TRAV27-201ENST00000390457 CADPS2Q86UW7 1296 aa10.86□□□□□ -0.67
TRAV27-201ENST00000390457 SPATA31A6Q5VVP1 1343 aa10.85□□□□□ -0.67
TRAV27-201ENST00000390457 CHGAP10645 457 aaKnown RBP10.85□□□□□ -0.67
TRAV27-201ENST00000390457 AMOTL2Q9Y2J4 779 aa10.85□□□□□ -0.67
TRAV27-201ENST00000390457 BRINP3Q76B58 766 aa10.84□□□□□ -0.67
TRAV27-201ENST00000390457 NUP155O75694 1391 aa10.84□□□□□ -0.67
TRAV27-201ENST00000390457 NRXN3Q9Y4C0 1643 aa10.84□□□□□ -0.67
TRAV27-201ENST00000390457 SHPRHQ149N8 1683 aa10.83□□□□□ -0.68
TRAV27-201ENST00000390457 SETD1AO15047 1707 aaKnown RBP10.83□□□□□ -0.68
TRAV27-201ENST00000390457 TRPM2O94759 1503 aa10.83□□□□□ -0.68
TRAV27-201ENST00000390457 DCCP43146 1447 aa10.83□□□□□ -0.68
TRAV27-201ENST00000390457 XRN1Q8IZH2 1706 aaKnown RBP10.82□□□□□ -0.68
TRAV27-201ENST00000390457 ATF3P18847 181 aa10.82□□□□□ -0.68
TRAV27-201ENST00000390457 SETBP1Q9Y6X0 1596 aa10.82□□□□□ -0.68
TRAV27-201ENST00000390457 ZNF772Q68DY9 489 aaPredicted RBP10.81□□□□□ -0.68
TRAV27-201ENST00000390457 C14orf37Q86TY3 774 aa10.81□□□□□ -0.68
TRAV27-201ENST00000390457 METP08581 1390 aa10.8□□□□□ -0.68
TRAV27-201ENST00000390457 UPF1Q92900 1129 aaKnown RBP eCLIP10.8□□□□□ -0.68
TRAV27-201ENST00000390457 MST1RQ04912 1400 aa10.8□□□□□ -0.68
TRAV27-201ENST00000390457 SETD5Q9C0A6 1442 aa10.8□□□□□ -0.68
TRAV27-201ENST00000390457 ASXL1Q8IXJ9 1541 aa10.79□□□□□ -0.68
TRAV27-201ENST00000390457 SPHKAPQ2M3C7 1700 aa10.78□□□□□ -0.68
TRAV27-201ENST00000390457 NHSL1Q5SYE7 1610 aa10.77□□□□□ -0.68
TRAV27-201ENST00000390457 CDK12Q9NYV4 1490 aaPredicted RBP10.77□□□□□ -0.69
TRAV27-201ENST00000390457 ADGRL3Q9HAR2 1447 aa10.76□□□□□ -0.69
TRAV27-201ENST00000390457 NEXMIFQ5QGS0 1516 aa10.76□□□□□ -0.69
TRAV27-201ENST00000390457 MEX3CQ5U5Q3 659 aaKnown RBP10.76□□□□□ -0.69
TRAV27-201ENST00000390457 RXRBP28702 533 aa10.75□□□□□ -0.69
TRAV27-201ENST00000390457 ITGAEP38570 1179 aa10.75□□□□□ -0.69
TRAV27-201ENST00000390457 TRIM52Q96A61 297 aa10.75□□□□□ -0.69
TRAV27-201ENST00000390457 LRRC59Q96AG4 307 aaKnown RBP10.75□□□□□ -0.69
TRAV27-201ENST00000390457 AFF2P51816 1311 aa10.75□□□□□ -0.69
TRAV27-201ENST00000390457 PNPLA6Q8IY17 1366 aa10.75□□□□□ -0.69
TRAV27-201ENST00000390457 CLTCL1P53675 1640 aa10.74□□□□□ -0.69
TRAV27-201ENST00000390457 NUTM2BA6NNL0 878 aaPredicted RBP10.74□□□□□ -0.69
TRAV27-201ENST00000390457 NUTM2EB1AL46 878 aaPredicted RBP10.74□□□□□ -0.69
TRAV27-201ENST00000390457 NUTM2AQ8IVF1 878 aaPredicted RBP10.74□□□□□ -0.69
TRAV27-201ENST00000390457 DDX17Q92841 729 aaKnown RBP10.74□□□□□ -0.69
TRAV27-201ENST00000390457 PRAG1Q86YV5 1406 aa10.74□□□□□ -0.69
TRAV27-201ENST00000390457 LAMC1P11047 1609 aa10.73□□□□□ -0.69
TRAV27-201ENST00000390457 NALCNQ8IZF0 1738 aa10.73□□□□□ -0.69
TRAV27-201ENST00000390457 ZNF326Q5BKZ1 582 aaKnown RBP10.73□□□□□ -0.69
TRAV27-201ENST00000390457 NAIPQ13075 1403 aa10.73□□□□□ -0.69
TRAV27-201ENST00000390457 EP400Q96L91 3159 aa10.73□□□□□ -0.69
TRAV27-201ENST00000390457 PTCH1Q13635 1447 aa10.72□□□□□ -0.69
TRAV27-201ENST00000390457 C1orf167Q5SNV9 1468 aa10.72□□□□□ -0.69
TRAV27-201ENST00000390457 DSG3P32926 999 aa10.71□□□□□ -0.69
TRAV27-201ENST00000390457 SOS2Q07890 1332 aaPredicted RBP10.71□□□□□ -0.69
TRAV27-201ENST00000390457 NCBP3Q53F19 620 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms