RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 ANKLE2Q86XL3 938 aa16.67■□□□□ 0.26
PTPRN2-202ENST00000389416 DENND4BO75064 1496 aaPredicted RBP16.67■□□□□ 0.26
PTPRN2-202ENST00000389416 ESCO1Q5FWF5 840 aa16.67■□□□□ 0.26
PTPRN2-202ENST00000389416 CABP1Q9NZU7 370 aa16.66■□□□□ 0.26
PTPRN2-202ENST00000389416 RAPGEF6Q8TEU7 1601 aa16.66■□□□□ 0.26
PTPRN2-202ENST00000389416 CDK19Q9BWU1 502 aa16.66■□□□□ 0.26
PTPRN2-202ENST00000389416 WDR62O43379 1518 aa16.65■□□□□ 0.26
PTPRN2-202ENST00000389416 RPGRIP1LQ68CZ1 1315 aa16.65■□□□□ 0.26
PTPRN2-202ENST00000389416 PLIN1O60240 522 aa16.65■□□□□ 0.26
PTPRN2-202ENST00000389416 TEFQ10587 303 aa16.65■□□□□ 0.26
PTPRN2-202ENST00000389416 RIPK4P57078 832 aa16.64■□□□□ 0.26
PTPRN2-202ENST00000389416 DDRGK1Q96HY6 314 aa16.64■□□□□ 0.25
PTPRN2-202ENST00000389416 CHMP4AQ9BY43 222 aa16.64■□□□□ 0.25
PTPRN2-202ENST00000389416 C1orf141Q5JVX7 400 aa16.64■□□□□ 0.25
PTPRN2-202ENST00000389416 UGGT2Q9NYU1 1516 aa16.63■□□□□ 0.25
PTPRN2-202ENST00000389416 ABTB2Q8N961 1025 aa16.63■□□□□ 0.25
PTPRN2-202ENST00000389416 ZBED9Q6R2W3 1325 aa16.63■□□□□ 0.25
PTPRN2-202ENST00000389416 E9PSI1 815 aa16.62■□□□□ 0.25
PTPRN2-202ENST00000389416 TCERG1O14776 1098 aaKnown RBP16.62■□□□□ 0.25
PTPRN2-202ENST00000389416 PTPRKQ15262 1439 aa16.62■□□□□ 0.25
PTPRN2-202ENST00000389416 RWDD1Q9H446 243 aaPredicted RBP16.62■□□□□ 0.25
PTPRN2-202ENST00000389416 PLCH2O75038 1416 aa16.62■□□□□ 0.25
PTPRN2-202ENST00000389416 KCNJ4P48050 445 aa16.61■□□□□ 0.25
PTPRN2-202ENST00000389416 ADAMTS8Q9UP79 889 aa16.61■□□□□ 0.25
PTPRN2-202ENST00000389416 WDR97A6NE52 1622 aa16.61■□□□□ 0.25
PTPRN2-202ENST00000389416 DHX29Q7Z478 1369 aaKnown RBP16.6■□□□□ 0.25
PTPRN2-202ENST00000389416 WAPLQ7Z5K2 1190 aa16.6■□□□□ 0.25
PTPRN2-202ENST00000389416 ADGRF5Q8IZF2 1346 aa16.59■□□□□ 0.25
PTPRN2-202ENST00000389416 NUP160Q12769 1436 aa16.59■□□□□ 0.25
PTPRN2-202ENST00000389416 RUNDC1Q96C34 613 aa16.59■□□□□ 0.25
PTPRN2-202ENST00000389416 KIAA0556O60303 1618 aa16.59■□□□□ 0.25
PTPRN2-202ENST00000389416 PPP2R1AP30153 589 aa16.59■□□□□ 0.25
PTPRN2-202ENST00000389416 NLRP2Q9NX02 1062 aa16.59■□□□□ 0.25
PTPRN2-202ENST00000389416 ERICH6BQ5W0A0 696 aa16.58■□□□□ 0.25
PTPRN2-202ENST00000389416 ANP32BQ92688 251 aaKnown RBP16.58■□□□□ 0.25
PTPRN2-202ENST00000389416 CHMP3Q9Y3E7 222 aa16.58■□□□□ 0.25
PTPRN2-202ENST00000389416 NECTIN2Q92692 538 aa16.57■□□□□ 0.24
PTPRN2-202ENST00000389416 GPRASP1Q5JY77 1395 aa16.57■□□□□ 0.24
PTPRN2-202ENST00000389416 EIF2S2P20042 333 aaKnown RBP16.57■□□□□ 0.24
PTPRN2-202ENST00000389416 TAOK2Q9UL54 1235 aa16.57■□□□□ 0.24
PTPRN2-202ENST00000389416 CTTNBP2Q8WZ74 1663 aa16.56■□□□□ 0.24
PTPRN2-202ENST00000389416 RTEL1-TNFRSF6BF6WH68 1400 aa16.56■□□□□ 0.24
PTPRN2-202ENST00000389416 WDR7Q9Y4E6 1490 aa16.55■□□□□ 0.24
PTPRN2-202ENST00000389416 FGD1P98174 961 aa16.55■□□□□ 0.24
PTPRN2-202ENST00000389416 NGEFQ8N5V2 710 aa16.55■□□□□ 0.24
PTPRN2-202ENST00000389416 RAPGEF4Q8WZA2 1011 aa16.55■□□□□ 0.24
PTPRN2-202ENST00000389416 EIF5BO60841 1220 aaKnown RBP16.54■□□□□ 0.24
PTPRN2-202ENST00000389416 SYTL4Q96C24 671 aaPredicted RBP16.54■□□□□ 0.24
PTPRN2-202ENST00000389416 RBM33Q96EV2 1170 aaKnown RBP16.54■□□□□ 0.24
PTPRN2-202ENST00000389416 USP35Q9P2H5 1018 aa16.54■□□□□ 0.24
PTPRN2-202ENST00000389416 COG6Q9Y2V7 657 aa16.54■□□□□ 0.24
PTPRN2-202ENST00000389416 TRAPPC8Q9Y2L5 1435 aa16.54■□□□□ 0.24
PTPRN2-202ENST00000389416 DISP1Q96F81 1524 aa16.54■□□□□ 0.24
PTPRN2-202ENST00000389416 C11orf95C9JLR9 678 aaPredicted RBP16.54■□□□□ 0.24
PTPRN2-202ENST00000389416 TCP11L2Q8N4U5 519 aa16.53■□□□□ 0.24
PTPRN2-202ENST00000389416 TPRNQ4KMQ1 711 aa16.53■□□□□ 0.24
PTPRN2-202ENST00000389416 BRD4O60885 1362 aaPredicted RBP16.53■□□□□ 0.24
PTPRN2-202ENST00000389416 XPCQ01831 940 aaPredicted RBP16.52■□□□□ 0.24
PTPRN2-202ENST00000389416 ZKSCAN2Q63HK3 967 aa16.52■□□□□ 0.24
PTPRN2-202ENST00000389416 TTC5Q8N0Z6 440 aa16.52■□□□□ 0.23
PTPRN2-202ENST00000389416 EXOC6Q8TAG9 804 aa16.52■□□□□ 0.23
PTPRN2-202ENST00000389416 ZNF692Q9BU19 519 aaPredicted RBP16.52■□□□□ 0.23
PTPRN2-202ENST00000389416 CCDC61Q9Y6R9 512 aa16.52■□□□□ 0.23
PTPRN2-202ENST00000389416 HMMRO75330 724 aa16.51■□□□□ 0.23
PTPRN2-202ENST00000389416 SYCP2Q9BX26 1530 aa16.51■□□□□ 0.23
PTPRN2-202ENST00000389416 RRP1P56182 461 aaKnown RBP16.51■□□□□ 0.23
PTPRN2-202ENST00000389416 PRKAR2BP31323 418 aa16.51■□□□□ 0.23
PTPRN2-202ENST00000389416 NUDT16Q96DE0 195 aaKnown RBP16.5■□□□□ 0.23
PTPRN2-202ENST00000389416 NAP1L2Q9ULW6 460 aaPredicted RBP16.5■□□□□ 0.23
PTPRN2-202ENST00000389416 CCDC184Q52MB2 194 aa16.5■□□□□ 0.23
PTPRN2-202ENST00000389416 TAF7LQ5H9L4 462 aa16.5■□□□□ 0.23
PTPRN2-202ENST00000389416 CDCA7LQ96GN5 454 aa16.49■□□□□ 0.23
PTPRN2-202ENST00000389416 CRBNQ96SW2 442 aa16.49■□□□□ 0.23
PTPRN2-202ENST00000389416 ABCA5Q8WWZ7 1642 aa16.49■□□□□ 0.23
PTPRN2-202ENST00000389416 GTF2E1P29083 439 aaPredicted RBP16.49■□□□□ 0.23
PTPRN2-202ENST00000389416 KDM5BQ9UGL1 1544 aa16.49■□□□□ 0.23
PTPRN2-202ENST00000389416 TSPYL4Q9UJ04 414 aa16.48■□□□□ 0.23
PTPRN2-202ENST00000389416 HDAC5Q9UQL6 1122 aa16.48■□□□□ 0.23
PTPRN2-202ENST00000389416 HSP90AB1P08238 724 aaKnown RBP16.47■□□□□ 0.23
PTPRN2-202ENST00000389416 AMOTL2Q9Y2J4 779 aa16.47■□□□□ 0.23
PTPRN2-202ENST00000389416 ATAD2Q6PL18 1390 aa16.47■□□□□ 0.23
PTPRN2-202ENST00000389416 RRS1Q15050 365 aaKnown RBP16.47■□□□□ 0.23
PTPRN2-202ENST00000389416 RPRD2Q5VT52 1461 aaKnown RBP16.47■□□□□ 0.23
PTPRN2-202ENST00000389416 NOS1P29475 1434 aa16.47■□□□□ 0.23
PTPRN2-202ENST00000389416 NCLP19338 710 aaKnown RBP16.46■□□□□ 0.23
PTPRN2-202ENST00000389416 GNAI1P63096 354 aa16.46■□□□□ 0.23
PTPRN2-202ENST00000389416 GORABQ5T7V8 394 aa16.46■□□□□ 0.23
PTPRN2-202ENST00000389416 GOLGA6L22H0YM25 854 aa16.46■□□□□ 0.23
PTPRN2-202ENST00000389416 PPP6R1Q9UPN7 881 aa16.46■□□□□ 0.23
PTPRN2-202ENST00000389416 ABCC2Q92887 1545 aa16.46■□□□□ 0.23
PTPRN2-202ENST00000389416 MEX3CQ5U5Q3 659 aaKnown RBP16.46■□□□□ 0.22
PTPRN2-202ENST00000389416 SULT6B1Q6IMI4 303 aa16.46■□□□□ 0.22
PTPRN2-202ENST00000389416 A2MP01023 1474 aa16.45■□□□□ 0.22
PTPRN2-202ENST00000389416 STRN4Q9NRL3 753 aa16.45■□□□□ 0.22
PTPRN2-202ENST00000389416 PBRM1Q86U86 1689 aa16.44■□□□□ 0.22
PTPRN2-202ENST00000389416 SPRYD3Q8NCJ5 442 aa16.44■□□□□ 0.22
PTPRN2-202ENST00000389416 FKBP5Q13451 457 aaPredicted RBP16.44■□□□□ 0.22
PTPRN2-202ENST00000389416 PNISRQ8TF01 805 aaKnown RBP16.44■□□□□ 0.22
PTPRN2-202ENST00000389416 ZNF518AQ6AHZ1 1483 aa16.44■□□□□ 0.22
PTPRN2-202ENST00000389416 TRIM6-TRIM34B2RNG4 842 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms