RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 VSIG10Q8N0Z9 540 aa6.18□□□□□ -1.42
LTN1-202ENST00000389194 AIMP1Q12904 312 aaKnown RBP6.18□□□□□ -1.42
LTN1-202ENST00000389194 MCTP1Q6DN14 999 aa6.18□□□□□ -1.42
LTN1-202ENST00000389194 GOLGA6L6A8MZA4 724 aa6.18□□□□□ -1.42
LTN1-202ENST00000389194 COG3Q96JB2 828 aa6.18□□□□□ -1.42
LTN1-202ENST00000389194 ANO2Q9NQ90 1003 aa6.18□□□□□ -1.42
LTN1-202ENST00000389194 ZNF592Q92610 1267 aa6.18□□□□□ -1.42
LTN1-202ENST00000389194 HMMRO75330 724 aa6.17□□□□□ -1.42
LTN1-202ENST00000389194 HDGFP51858 240 aaKnown RBP6.17□□□□□ -1.42
LTN1-202ENST00000389194 ST18O60284 1047 aa6.17□□□□□ -1.42
LTN1-202ENST00000389194 FKBP5Q13451 457 aaPredicted RBP6.17□□□□□ -1.42
LTN1-202ENST00000389194 DIAPH1O60610 1272 aaKnown RBP6.17□□□□□ -1.42
LTN1-202ENST00000389194 C20orf194Q5TEA3 1177 aa6.17□□□□□ -1.42
LTN1-202ENST00000389194 TCP11L2Q8N4U5 519 aa6.17□□□□□ -1.42
LTN1-202ENST00000389194 LRRC9Q6ZRR7 1453 aa6.17□□□□□ -1.42
LTN1-202ENST00000389194 CNTLNQ9NXG0 1405 aa6.17□□□□□ -1.42
LTN1-202ENST00000389194 FAM13BQ9NYF5 915 aa6.17□□□□□ -1.42
LTN1-202ENST00000389194 SYTL4Q96C24 671 aaPredicted RBP6.17□□□□□ -1.42
LTN1-202ENST00000389194 PTPRGP23470 1445 aa6.16□□□□□ -1.42
LTN1-202ENST00000389194 PES1O00541 588 aaKnown RBP6.16□□□□□ -1.42
LTN1-202ENST00000389194 HSP90AA2PQ14568 343 aaPredicted RBP6.16□□□□□ -1.42
LTN1-202ENST00000389194 C22orf23Q9BZE7 217 aa6.16□□□□□ -1.42
LTN1-202ENST00000389194 EVC2Q86UK5 1308 aa6.16□□□□□ -1.42
LTN1-202ENST00000389194 CCDC27Q2M243 656 aa6.16□□□□□ -1.42
LTN1-202ENST00000389194 CCAR2Q8N163 923 aaKnown RBP6.16□□□□□ -1.42
LTN1-202ENST00000389194 MAP4K4O95819 1239 aaPredicted RBP6.16□□□□□ -1.42
LTN1-202ENST00000389194 EXOSC9Q06265 439 aaKnown RBP6.16□□□□□ -1.42
LTN1-202ENST00000389194 KIF16BQ96L93 1317 aa6.16□□□□□ -1.42
LTN1-202ENST00000389194 SYNJ1O43426 1573 aa6.16□□□□□ -1.42
LTN1-202ENST00000389194 STK11IPQ8N1F8 1099 aa6.16□□□□□ -1.42
LTN1-202ENST00000389194 VPS37CA5D8V6 355 aaPredicted RBP6.15□□□□□ -1.42
LTN1-202ENST00000389194 NRDCO43847 1150 aa6.15□□□□□ -1.42
LTN1-202ENST00000389194 C9orf78Q9NZ63 289 aaPredicted RBP6.15□□□□□ -1.42
LTN1-202ENST00000389194 USP35Q9P2H5 1018 aa6.15□□□□□ -1.42
LTN1-202ENST00000389194 PPP2R1AP30153 589 aa6.15□□□□□ -1.42
LTN1-202ENST00000389194 SF3A1Q15459 793 aaKnown RBP6.15□□□□□ -1.42
LTN1-202ENST00000389194 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.15□□□□□ -1.42
LTN1-202ENST00000389194 RASSF8Q8NHQ8 419 aa6.15□□□□□ -1.42
LTN1-202ENST00000389194 NCOA2Q15596 1464 aa6.15□□□□□ -1.43
LTN1-202ENST00000389194 H3BQV1 296 aa6.15□□□□□ -1.43
LTN1-202ENST00000389194 IFFO2Q5TF58 517 aa6.15□□□□□ -1.43
LTN1-202ENST00000389194 WWC1Q8IX03 1113 aa6.15□□□□□ -1.43
LTN1-202ENST00000389194 THUMPD2Q9BTF0 503 aaKnown RBP6.15□□□□□ -1.43
LTN1-202ENST00000389194 PDZRN3Q9UPQ7 1066 aa6.15□□□□□ -1.43
LTN1-202ENST00000389194 TEFQ10587 303 aa6.15□□□□□ -1.43
LTN1-202ENST00000389194 RUNDC1Q96C34 613 aa6.15□□□□□ -1.43
LTN1-202ENST00000389194 MYOM3Q5VTT5 1437 aa6.15□□□□□ -1.43
LTN1-202ENST00000389194 NESP48681 1621 aa6.14□□□□□ -1.43
LTN1-202ENST00000389194 UACAQ9BZF9 1416 aa6.14□□□□□ -1.43
LTN1-202ENST00000389194 DNAJC5BQ9UF47 199 aa6.14□□□□□ -1.43
LTN1-202ENST00000389194 GAPVD1Q14C86 1478 aa6.14□□□□□ -1.43
LTN1-202ENST00000389194 FAM177BA6PVY3 158 aa6.14□□□□□ -1.43
LTN1-202ENST00000389194 EID1Q9Y6B2 187 aa6.14□□□□□ -1.43
LTN1-202ENST00000389194 RAD21O60216 631 aa6.14□□□□□ -1.43
LTN1-202ENST00000389194 SYAP1Q96A49 352 aaPredicted RBP6.14□□□□□ -1.43
LTN1-202ENST00000389194 TSPYL4Q9UJ04 414 aa6.14□□□□□ -1.43
LTN1-202ENST00000389194 PNISRQ8TF01 805 aaKnown RBP6.14□□□□□ -1.43
LTN1-202ENST00000389194 CHMP4CQ96CF2 233 aa6.14□□□□□ -1.43
LTN1-202ENST00000389194 GPATCH3Q96I76 525 aa6.14□□□□□ -1.43
LTN1-202ENST00000389194 DIAPH3Q9NSV4 1193 aa6.14□□□□□ -1.43
LTN1-202ENST00000389194 DDX19BQ9UMR2 479 aa6.14□□□□□ -1.43
LTN1-202ENST00000389194 MTMR7Q9Y216 660 aa6.14□□□□□ -1.43
LTN1-202ENST00000389194 VGFO15240 615 aaPredicted RBP6.13□□□□□ -1.43
LTN1-202ENST00000389194 GTF2E1P29083 439 aaPredicted RBP6.13□□□□□ -1.43
LTN1-202ENST00000389194 MIS18AQ9NYP9 233 aa6.13□□□□□ -1.43
LTN1-202ENST00000389194 NOB1Q9ULX3 412 aaKnown RBP6.13□□□□□ -1.43
LTN1-202ENST00000389194 PRKAR2BP31323 418 aa6.13□□□□□ -1.43
LTN1-202ENST00000389194 ANKRD50Q9ULJ7 1429 aa6.13□□□□□ -1.43
LTN1-202ENST00000389194 DDX11L8A8MPP1 907 aa6.13□□□□□ -1.43
LTN1-202ENST00000389194 APPP05067 770 aa6.13□□□□□ -1.43
LTN1-202ENST00000389194 FAM184AQ8NB25 1140 aa6.13□□□□□ -1.43
LTN1-202ENST00000389194 CAVIN1Q6NZI2 390 aaKnown RBP6.12□□□□□ -1.43
LTN1-202ENST00000389194 FBLN1P23142 703 aa6.12□□□□□ -1.43
LTN1-202ENST00000389194 CEBPZQ03701 1054 aaKnown RBP6.12□□□□□ -1.43
LTN1-202ENST00000389194 RBM33Q96EV2 1170 aaKnown RBP6.12□□□□□ -1.43
LTN1-202ENST00000389194 RRS1Q15050 365 aaKnown RBP6.12□□□□□ -1.43
LTN1-202ENST00000389194 C1orf141Q5JVX7 400 aa6.12□□□□□ -1.43
LTN1-202ENST00000389194 TXNDC2Q86VQ3 553 aa6.12□□□□□ -1.43
LTN1-202ENST00000389194 RBM10P98175 930 aaKnown RBP6.12□□□□□ -1.43
LTN1-202ENST00000389194 LMOD3Q0VAK6 560 aa6.12□□□□□ -1.43
LTN1-202ENST00000389194 VPS53Q5VIR6 699 aa6.12□□□□□ -1.43
LTN1-202ENST00000389194 NEUROD6Q96NK8 337 aa6.12□□□□□ -1.43
LTN1-202ENST00000389194 CHMP5Q9NZZ3 219 aa6.12□□□□□ -1.43
LTN1-202ENST00000389194 DCTN1Q14203 1278 aa6.12□□□□□ -1.43
LTN1-202ENST00000389194 SAMD1Q6SPF0 538 aaPredicted RBP6.12□□□□□ -1.43
LTN1-202ENST00000389194 DDX54Q8TDD1 881 aaKnown RBP6.12□□□□□ -1.43
LTN1-202ENST00000389194 PRAM1Q96QH2 718 aa6.12□□□□□ -1.43
LTN1-202ENST00000389194 PSME1Q06323 249 aa6.11□□□□□ -1.43
LTN1-202ENST00000389194 PRG4Q92954 1404 aaPredicted RBP6.11□□□□□ -1.43
LTN1-202ENST00000389194 FYB1O15117 783 aa6.11□□□□□ -1.43
LTN1-202ENST00000389194 IFIT2P09913 472 aaKnown RBP6.11□□□□□ -1.43
LTN1-202ENST00000389194 XPCQ01831 940 aaPredicted RBP6.11□□□□□ -1.43
LTN1-202ENST00000389194 RSPH4AQ5TD94 716 aa6.11□□□□□ -1.43
LTN1-202ENST00000389194 TRAK2O60296 914 aa6.11□□□□□ -1.43
LTN1-202ENST00000389194 BICD2Q8TD16 824 aa6.11□□□□□ -1.43
LTN1-202ENST00000389194 R3HCC1Q9Y3T6 440 aaKnown RBP6.11□□□□□ -1.43
LTN1-202ENST00000389194 PRPF40AO75400 957 aaKnown RBP6.11□□□□□ -1.43
LTN1-202ENST00000389194 BACH2Q9BYV9 841 aa6.11□□□□□ -1.43
LTN1-202ENST00000389194 BECN2A8MW95 431 aa6.11□□□□□ -1.43
LTN1-202ENST00000389194 FAM69CQ0P6D2 419 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms