RNA–Protein interactions for RNA: ENST00000383831.7

CPNE9-202, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-202ENST00000383831 NRXN1Q9ULB1 1477 aa28.37■■■□□ 2.13
CPNE9-202ENST00000383831 ARID4BQ4LE39 1312 aaPredicted RBP28.37■■■□□ 2.13
CPNE9-202ENST00000383831 ADGRF5Q8IZF2 1346 aa28.37■■■□□ 2.13
CPNE9-202ENST00000383831 IDI1Q13907 227 aa28.37■■■□□ 2.13
CPNE9-202ENST00000383831 RPGRIP1LQ68CZ1 1315 aa28.34■■■□□ 2.13
CPNE9-202ENST00000383831 SPATA31D1Q6ZQQ2 1576 aa28.34■■■□□ 2.13
CPNE9-202ENST00000383831 IQGAP1P46940 1657 aa28.32■■■□□ 2.12
CPNE9-202ENST00000383831 TMEM131LA2VDJ0 1609 aa28.31■■■□□ 2.12
CPNE9-202ENST00000383831 NEXMIFQ5QGS0 1516 aa28.3■■■□□ 2.12
CPNE9-202ENST00000383831 ESF1Q9H501 851 aaKnown RBP28.3■■■□□ 2.12
CPNE9-202ENST00000383831 MYO5BQ9ULV0 1848 aa28.29■■■□□ 2.12
CPNE9-202ENST00000383831 ZMYM3Q14202 1370 aa28.28■■■□□ 2.12
CPNE9-202ENST00000383831 CFAP70Q5T0N1 1121 aa28.27■■■□□ 2.12
CPNE9-202ENST00000383831 PIK3C2GO75747 1445 aa28.26■■■□□ 2.11
CPNE9-202ENST00000383831 SCAF11Q99590 1463 aaKnown RBP28.25■■■□□ 2.11
CPNE9-202ENST00000383831 ANP32CO43423 234 aa28.23■■■□□ 2.11
CPNE9-202ENST00000383831 TESK2Q96S53 571 aa28.21■■■□□ 2.11
CPNE9-202ENST00000383831 POLR3GLQ9BT43 218 aa28.2■■■□□ 2.11
CPNE9-202ENST00000383831 SETBP1Q9Y6X0 1596 aa28.19■■■□□ 2.1
CPNE9-202ENST00000383831 VGFO15240 615 aaPredicted RBP28.19■■■□□ 2.1
CPNE9-202ENST00000383831 NUTM2DQ5VT03 806 aaPredicted RBP28.18■■■□□ 2.1
CPNE9-202ENST00000383831 ZFYVE9O95405 1425 aa28.18■■■□□ 2.1
CPNE9-202ENST00000383831 C14orf93Q9H972 538 aaKnown RBP28.16■■■□□ 2.1
CPNE9-202ENST00000383831 DISP3Q9P2K9 1392 aa28.14■■■□□ 2.1
CPNE9-202ENST00000383831 A2ML1A8K2U0 1454 aa28.14■■■□□ 2.1
CPNE9-202ENST00000383831 STAG3Q9UJ98 1225 aa28.14■■■□□ 2.09
CPNE9-202ENST00000383831 EIF3AQ14152 1382 aaKnown RBP28.13■■■□□ 2.09
CPNE9-202ENST00000383831 ADGRB1O14514 1584 aa28.13■■■□□ 2.09
CPNE9-202ENST00000383831 FER1L4A9Z1Z3 1794 aa28.12■■■□□ 2.09
CPNE9-202ENST00000383831 TNRQ92752 1358 aa28.11■■■□□ 2.09
CPNE9-202ENST00000383831 YTHDC1Q96MU7 727 aaKnown RBP28.11■■■□□ 2.09
CPNE9-202ENST00000383831 TMF1P82094 1093 aa28.09■■■□□ 2.09
CPNE9-202ENST00000383831 CCER2I3L3R5 266 aa28.08■■■□□ 2.09
CPNE9-202ENST00000383831 C3P01024 1663 aa28.07■■■□□ 2.08
CPNE9-202ENST00000383831 MYO3AQ8NEV4 1616 aa28.06■■■□□ 2.08
CPNE9-202ENST00000383831 TMEM132EQ6IEE7 984 aa28.04■■■□□ 2.08
CPNE9-202ENST00000383831 RIMS2Q9UQ26 1411 aa28.03■■■□□ 2.08
CPNE9-202ENST00000383831 CEBPAP49715 358 aaPredicted RBP28.03■■■□□ 2.08
CPNE9-202ENST00000383831 KDM5AP29375 1690 aaKnown RBP28.01■■■□□ 2.07
CPNE9-202ENST00000383831 ASXL1Q8IXJ9 1541 aa28■■■□□ 2.07
CPNE9-202ENST00000383831 UBR1Q8IWV7 1749 aa28■■■□□ 2.07
CPNE9-202ENST00000383831 PRKRIP1Q9H875 184 aaPredicted RBP27.99■■■□□ 2.07
CPNE9-202ENST00000383831 TRAK1Q9UPV9 953 aa27.99■■■□□ 2.07
CPNE9-202ENST00000383831 SENP3Q9H4L4 574 aaPredicted RBP27.98■■■□□ 2.07
CPNE9-202ENST00000383831 NLRP1Q9C000 1473 aa27.97■■■□□ 2.07
CPNE9-202ENST00000383831 ALKQ9UM73 1620 aa27.96■■■□□ 2.07
CPNE9-202ENST00000383831 CENPJQ9HC77 1338 aaPredicted RBP27.96■■■□□ 2.07
CPNE9-202ENST00000383831 SBNO2Q9Y2G9 1366 aa27.95■■■□□ 2.06
CPNE9-202ENST00000383831 ARHGEF28Q8N1W1 1705 aaKnown RBP27.95■■■□□ 2.06
CPNE9-202ENST00000383831 QRICH2Q9H0J4 1663 aa27.95■■■□□ 2.06
CPNE9-202ENST00000383831 CENPBP07199 599 aaPredicted RBP27.94■■■□□ 2.06
CPNE9-202ENST00000383831 CDCA8Q53HL2 280 aa27.93■■■□□ 2.06
CPNE9-202ENST00000383831 SLC24A1O60721 1099 aa27.91■■■□□ 2.06
CPNE9-202ENST00000383831 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.91■■■□□ 2.06
CPNE9-202ENST00000383831 RIMS1Q86UR5 1692 aaKnown RBP27.91■■■□□ 2.06
CPNE9-202ENST00000383831 PLPPR3Q6T4P5 718 aa27.91■■■□□ 2.06
CPNE9-202ENST00000383831 SETD1AO15047 1707 aaKnown RBP27.89■■■□□ 2.06
CPNE9-202ENST00000383831 TMEM2Q9UHN6 1383 aa27.89■■■□□ 2.06
CPNE9-202ENST00000383831 NRXN3Q9Y4C0 1643 aa27.89■■■□□ 2.05
CPNE9-202ENST00000383831 MYOM1P52179 1685 aa27.88■■■□□ 2.05
CPNE9-202ENST00000383831 PTPRMP28827 1452 aa27.88■■■□□ 2.05
CPNE9-202ENST00000383831 ADAMTSL3P82987 1691 aa27.87■■■□□ 2.05
CPNE9-202ENST00000383831 YTHDC2Q9H6S0 1430 aaKnown RBP27.87■■■□□ 2.05
CPNE9-202ENST00000383831 PANK3Q9H999 370 aa27.85■■■□□ 2.05
CPNE9-202ENST00000383831 PER1O15534 1290 aaPredicted RBP27.84■■■□□ 2.05
CPNE9-202ENST00000383831 HDGFP51858 240 aaKnown RBP27.84■■■□□ 2.05
CPNE9-202ENST00000383831 STK26Q9P289 416 aa27.84■■■□□ 2.05
CPNE9-202ENST00000383831 CNGB1Q14028 1251 aaPredicted RBP27.83■■■□□ 2.05
CPNE9-202ENST00000383831 CCDC184Q52MB2 194 aa27.81■■■□□ 2.04
CPNE9-202ENST00000383831 SLIT1O75093 1534 aa27.76■■■□□ 2.04
CPNE9-202ENST00000383831 TULP4Q9NRJ4 1543 aa27.76■■■□□ 2.04
CPNE9-202ENST00000383831 ARHGAP23Q9P227 1491 aa27.76■■■□□ 2.03
CPNE9-202ENST00000383831 LRPPRCP42704 1394 aaKnown RBP27.76■■■□□ 2.03
CPNE9-202ENST00000383831 KTN1Q86UP2 1357 aaKnown RBP27.76■■■□□ 2.03
CPNE9-202ENST00000383831 LTKP29376 864 aa27.75■■■□□ 2.03
CPNE9-202ENST00000383831 DLC1Q96QB1 1528 aa27.75■■■□□ 2.03
CPNE9-202ENST00000383831 METP08581 1390 aa27.74■■■□□ 2.03
CPNE9-202ENST00000383831 SAFB2Q14151 953 aaKnown RBP eCLIP27.73■■■□□ 2.03
CPNE9-202ENST00000383831 PRAM1Q96QH2 718 aa27.73■■■□□ 2.03
CPNE9-202ENST00000383831 PLEKHG1Q9ULL1 1385 aa27.73■■■□□ 2.03
CPNE9-202ENST00000383831 RALBP1Q15311 655 aa27.73■■■□□ 2.03
CPNE9-202ENST00000383831 MRS2Q9HD23 443 aa27.73■■■□□ 2.03
CPNE9-202ENST00000383831 CEP170BQ9Y4F5 1589 aaPredicted RBP27.72■■■□□ 2.03
CPNE9-202ENST00000383831 EVC2Q86UK5 1308 aa27.72■■■□□ 2.03
CPNE9-202ENST00000383831 TXNDC2Q86VQ3 553 aa27.71■■■□□ 2.03
CPNE9-202ENST00000383831 PARD3Q8TEW0 1356 aa27.71■■■□□ 2.03
CPNE9-202ENST00000383831 ADAMTS13Q76LX8 1427 aa27.71■■■□□ 2.03
CPNE9-202ENST00000383831 BCANQ96GW7 911 aa27.71■■■□□ 2.03
CPNE9-202ENST00000383831 POGKQ9P215 609 aa27.71■■■□□ 2.03
CPNE9-202ENST00000383831 THEMISQ8N1K5 641 aaPredicted RBP27.7■■■□□ 2.02
CPNE9-202ENST00000383831 ABCC11Q96J66 1382 aa27.7■■■□□ 2.02
CPNE9-202ENST00000383831 EID1Q9Y6B2 187 aa27.69■■■□□ 2.02
CPNE9-202ENST00000383831 PUS7Q96PZ0 661 aaKnown RBP27.68■■■□□ 2.02
CPNE9-202ENST00000383831 MYBBP1AQ9BQG0 1328 aaKnown RBP27.68■■■□□ 2.02
CPNE9-202ENST00000383831 KNSTRNQ9Y448 316 aa27.67■■■□□ 2.02
CPNE9-202ENST00000383831 KNDC1Q76NI1 1749 aa27.67■■■□□ 2.02
CPNE9-202ENST00000383831 CC2D1BQ5T0F9 858 aaKnown RBP27.66■■■□□ 2.02
CPNE9-202ENST00000383831 MINK1Q8N4C8 1332 aaPredicted RBP27.66■■■□□ 2.02
CPNE9-202ENST00000383831 ZNF142P52746 1687 aaPredicted RBP27.65■■■□□ 2.02
CPNE9-202ENST00000383831 MED14O60244 1454 aa27.64■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms