RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 PTMSP20962 102 aa21.3■■□□□ 1
SGCB-201ENST00000381431 NECTIN2Q92692 538 aa21.3■■□□□ 1
SGCB-201ENST00000381431 PRG4Q92954 1404 aaPredicted RBP21.29■■□□□ 1
SGCB-201ENST00000381431 GOLGA6L6A8MZA4 724 aa21.29■■□□□ 1
SGCB-201ENST00000381431 PRDM2Q13029 1718 aa21.28■■□□□ 1
SGCB-201ENST00000381431 C11orf95C9JLR9 678 aaPredicted RBP21.28■■□□□ 1
SGCB-201ENST00000381431 DDX49Q9Y6V7 483 aaKnown RBP21.28■■□□□ 1
SGCB-201ENST00000381431 TOP2BQ02880 1626 aa21.28■■□□□ 1
SGCB-201ENST00000381431 CHMP4AQ9BY43 222 aa21.27■■□□□ 1
SGCB-201ENST00000381431 KIAA2012Q0VF49 1180 aa21.26■□□□□ 0.99
SGCB-201ENST00000381431 SYAP1Q96A49 352 aaPredicted RBP21.26■□□□□ 0.99
SGCB-201ENST00000381431 TIAM1Q13009 1591 aa21.25■□□□□ 0.99
SGCB-201ENST00000381431 SLC12A5Q9H2X9 1139 aa21.25■□□□□ 0.99
SGCB-201ENST00000381431 GORABQ5T7V8 394 aa21.25■□□□□ 0.99
SGCB-201ENST00000381431 GNL2Q13823 731 aaKnown RBP21.24■□□□□ 0.99
SGCB-201ENST00000381431 NAIPQ13075 1403 aa21.24■□□□□ 0.99
SGCB-201ENST00000381431 STAC3Q96MF2 364 aa21.24■□□□□ 0.99
SGCB-201ENST00000381431 POLA1P09884 1462 aaPredicted RBP21.24■□□□□ 0.99
SGCB-201ENST00000381431 GRIN2BQ13224 1484 aa21.24■□□□□ 0.99
SGCB-201ENST00000381431 KIAA1107Q9UPP5 1409 aa21.23■□□□□ 0.99
SGCB-201ENST00000381431 DDX11L8A8MPP1 907 aa21.23■□□□□ 0.99
SGCB-201ENST00000381431 BCAR3O75815 825 aa21.23■□□□□ 0.99
SGCB-201ENST00000381431 EIF2S2P20042 333 aaKnown RBP21.23■□□□□ 0.99
SGCB-201ENST00000381431 NFKBIBQ15653 356 aa21.23■□□□□ 0.99
SGCB-201ENST00000381431 GPATCH3Q96I76 525 aa21.22■□□□□ 0.99
SGCB-201ENST00000381431 CCDC9Q9Y3X0 531 aaKnown RBP21.22■□□□□ 0.99
SGCB-201ENST00000381431 HDAC5Q9UQL6 1122 aa21.21■□□□□ 0.99
SGCB-201ENST00000381431 API5Q9BZZ5 524 aaKnown RBP21.2■□□□□ 0.98
SGCB-201ENST00000381431 TOPBP1Q92547 1522 aa21.19■□□□□ 0.98
SGCB-201ENST00000381431 HSP90B1P14625 803 aaKnown RBP21.19■□□□□ 0.98
SGCB-201ENST00000381431 TEFQ10587 303 aa21.19■□□□□ 0.98
SGCB-201ENST00000381431 OSCARQ8IYS5 282 aa21.18■□□□□ 0.98
SGCB-201ENST00000381431 C22orf23Q9BZE7 217 aa21.18■□□□□ 0.98
SGCB-201ENST00000381431 C9orf84Q5VXU9 1444 aa21.17■□□□□ 0.98
SGCB-201ENST00000381431 TAF7LQ5H9L4 462 aa21.17■□□□□ 0.98
SGCB-201ENST00000381431 CHMP5Q9NZZ3 219 aa21.17■□□□□ 0.98
SGCB-201ENST00000381431 FKBP5Q13451 457 aaPredicted RBP21.16■□□□□ 0.98
SGCB-201ENST00000381431 KIF16BQ96L93 1317 aa21.16■□□□□ 0.98
SGCB-201ENST00000381431 EXOSC9Q06265 439 aaKnown RBP21.15■□□□□ 0.98
SGCB-201ENST00000381431 TSR2Q969E8 191 aaKnown RBP21.15■□□□□ 0.98
SGCB-201ENST00000381431 TROQ12816 1431 aaPredicted RBP21.14■□□□□ 0.98
SGCB-201ENST00000381431 GNAI1P63096 354 aa21.14■□□□□ 0.97
SGCB-201ENST00000381431 EFCAB5A4FU69 1503 aa21.14■□□□□ 0.97
SGCB-201ENST00000381431 ANO2Q9NQ90 1003 aa21.12■□□□□ 0.97
SGCB-201ENST00000381431 HTATSF1O43719 755 aaKnown RBP21.12■□□□□ 0.97
SGCB-201ENST00000381431 REC8O95072 547 aa21.12■□□□□ 0.97
SGCB-201ENST00000381431 ISY1Q9ULR0 285 aaKnown RBP21.12■□□□□ 0.97
SGCB-201ENST00000381431 ARHGAP5Q13017 1502 aa21.12■□□□□ 0.97
SGCB-201ENST00000381431 BACH2Q9BYV9 841 aa21.12■□□□□ 0.97
SGCB-201ENST00000381431 DAPK1P53355 1430 aa21.11■□□□□ 0.97
SGCB-201ENST00000381431 DNAJC5BQ9UF47 199 aa21.11■□□□□ 0.97
SGCB-201ENST00000381431 PDZRN3Q9UPQ7 1066 aa21.11■□□□□ 0.97
SGCB-201ENST00000381431 EHBP1L1Q8N3D4 1523 aa21.11■□□□□ 0.97
SGCB-201ENST00000381431 PRKAR2BP31323 418 aa21.1■□□□□ 0.97
SGCB-201ENST00000381431 C9orf78Q9NZ63 289 aaPredicted RBP21.1■□□□□ 0.97
SGCB-201ENST00000381431 FAM69CQ0P6D2 419 aa21.1■□□□□ 0.97
SGCB-201ENST00000381431 FRAT2O75474 233 aaPredicted RBP21.09■□□□□ 0.97
SGCB-201ENST00000381431 NUTM2GQ5VZR2 741 aa21.09■□□□□ 0.97
SGCB-201ENST00000381431 SKAP1Q86WV1 359 aa21.09■□□□□ 0.97
SGCB-201ENST00000381431 TSPYL4Q9UJ04 414 aa21.09■□□□□ 0.97
SGCB-201ENST00000381431 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.09■□□□□ 0.97
SGCB-201ENST00000381431 CDK13Q14004 1512 aaKnown RBP21.09■□□□□ 0.97
SGCB-201ENST00000381431 SYNJ2O15056 1496 aa21.08■□□□□ 0.97
SGCB-201ENST00000381431 DIAPH3Q9NSV4 1193 aa21.08■□□□□ 0.97
SGCB-201ENST00000381431 C1orf141Q5JVX7 400 aa21.08■□□□□ 0.97
SGCB-201ENST00000381431 SKOR2Q2VWA4 1001 aaPredicted RBP21.07■□□□□ 0.96
SGCB-201ENST00000381431 PDE3AQ14432 1141 aa21.07■□□□□ 0.96
SGCB-201ENST00000381431 PRAM1Q96QH2 718 aa21.07■□□□□ 0.96
SGCB-201ENST00000381431 C1orf115Q9H7X2 142 aa21.07■□□□□ 0.96
SGCB-201ENST00000381431 SMG6Q86US8 1419 aaKnown RBP21.06■□□□□ 0.96
SGCB-201ENST00000381431 TOMM22Q9NS69 142 aa21.05■□□□□ 0.96
SGCB-201ENST00000381431 SCAPERQ9BY12 1400 aa21.05■□□□□ 0.96
SGCB-201ENST00000381431 ANKRD30BQ9BXX2 1392 aa21.04■□□□□ 0.96
SGCB-201ENST00000381431 CSPP1Q1MSJ5 1256 aa21.04■□□□□ 0.96
SGCB-201ENST00000381431 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.04■□□□□ 0.96
SGCB-201ENST00000381431 PHF14O94880 888 aa21.03■□□□□ 0.96
SGCB-201ENST00000381431 EPRSP07814 1512 aaKnown RBP21.03■□□□□ 0.96
SGCB-201ENST00000381431 SF3A1Q15459 793 aaKnown RBP21.03■□□□□ 0.96
SGCB-201ENST00000381431 AMER1Q5JTC6 1135 aaPredicted RBP21.03■□□□□ 0.96
SGCB-201ENST00000381431 AAMPQ13685 434 aa21.02■□□□□ 0.96
SGCB-201ENST00000381431 INTS3Q68E01 1043 aaKnown RBP21.01■□□□□ 0.95
SGCB-201ENST00000381431 NLRP6P59044 892 aa21■□□□□ 0.95
SGCB-201ENST00000381431 CABP1Q9NZU7 370 aa21■□□□□ 0.95
SGCB-201ENST00000381431 NOB1Q9ULX3 412 aaKnown RBP21■□□□□ 0.95
SGCB-201ENST00000381431 HMGXB3Q12766 1538 aa21■□□□□ 0.95
SGCB-201ENST00000381431 ERBINQ96RT1 1412 aa21■□□□□ 0.95
SGCB-201ENST00000381431 NEXNQ0ZGT2 675 aa21■□□□□ 0.95
SGCB-201ENST00000381431 H3BQV1 296 aa20.99■□□□□ 0.95
SGCB-201ENST00000381431 IFIT2P09913 472 aaKnown RBP20.99■□□□□ 0.95
SGCB-201ENST00000381431 PSME1Q06323 249 aa20.99■□□□□ 0.95
SGCB-201ENST00000381431 C20orf194Q5TEA3 1177 aa20.99■□□□□ 0.95
SGCB-201ENST00000381431 IFFO2Q5TF58 517 aa20.99■□□□□ 0.95
SGCB-201ENST00000381431 FAM184AQ8NB25 1140 aa20.99■□□□□ 0.95
SGCB-201ENST00000381431 ZKSCAN1P17029 563 aaPredicted RBP20.98■□□□□ 0.95
SGCB-201ENST00000381431 MCTP1Q6DN14 999 aa20.98■□□□□ 0.95
SGCB-201ENST00000381431 BRPF3Q9ULD4 1205 aa20.98■□□□□ 0.95
SGCB-201ENST00000381431 MSH5O43196 834 aa20.98■□□□□ 0.95
SGCB-201ENST00000381431 ATP6V1DQ9Y5K8 247 aa20.98■□□□□ 0.95
SGCB-201ENST00000381431 TWISTNBQ3B726 338 aaPredicted RBP20.98■□□□□ 0.95
SGCB-201ENST00000381431 PCF11O94913 1555 aaKnown RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms