RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 ZFYVE9O95405 1425 aa28.99■■■□□ 2.23
TSSC4-203ENST00000380996 ADGRF5Q8IZF2 1346 aa28.99■■■□□ 2.23
TSSC4-203ENST00000380996 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.99■■■□□ 2.23
TSSC4-203ENST00000380996 IFT172Q9UG01 1749 aa28.98■■■□□ 2.23
TSSC4-203ENST00000380996 RALGAPBQ86X10 1494 aa28.98■■■□□ 2.23
TSSC4-203ENST00000380996 PPLO60437 1756 aa28.97■■■□□ 2.23
TSSC4-203ENST00000380996 THEMISQ8N1K5 641 aaPredicted RBP28.97■■■□□ 2.23
TSSC4-203ENST00000380996 NRXN1Q9ULB1 1477 aa28.97■■■□□ 2.23
TSSC4-203ENST00000380996 RIMS2Q9UQ26 1411 aa28.96■■■□□ 2.23
TSSC4-203ENST00000380996 MYO3AQ8NEV4 1616 aa28.96■■■□□ 2.23
TSSC4-203ENST00000380996 MYO5BQ9ULV0 1848 aa28.95■■■□□ 2.22
TSSC4-203ENST00000380996 SETD1BQ9UPS6 1966 aaKnown RBP28.94■■■□□ 2.22
TSSC4-203ENST00000380996 ROCK2O75116 1388 aaKnown RBP28.94■■■□□ 2.22
TSSC4-203ENST00000380996 TMEM2Q9UHN6 1383 aa28.94■■■□□ 2.22
TSSC4-203ENST00000380996 UBR1Q8IWV7 1749 aa28.94■■■□□ 2.22
TSSC4-203ENST00000380996 NUTM2DQ5VT03 806 aaPredicted RBP28.94■■■□□ 2.22
TSSC4-203ENST00000380996 CARD11Q9BXL7 1154 aa28.91■■■□□ 2.22
TSSC4-203ENST00000380996 CEP170BQ9Y4F5 1589 aaPredicted RBP28.91■■■□□ 2.22
TSSC4-203ENST00000380996 PIK3C2GO75747 1445 aa28.91■■■□□ 2.22
TSSC4-203ENST00000380996 TRPM1Q7Z4N2 1603 aa28.89■■■□□ 2.22
TSSC4-203ENST00000380996 EIF4G2P78344 907 aaKnown RBP eCLIP28.89■■■□□ 2.21
TSSC4-203ENST00000380996 GPRASP1Q5JY77 1395 aa28.88■■■□□ 2.21
TSSC4-203ENST00000380996 EID1Q9Y6B2 187 aa28.88■■■□□ 2.21
TSSC4-203ENST00000380996 NBPF1Q3BBV0 1214 aa28.87■■■□□ 2.21
TSSC4-203ENST00000380996 C14orf93Q9H972 538 aaKnown RBP28.87■■■□□ 2.21
TSSC4-203ENST00000380996 ZNF316A6NFI3 1004 aaPredicted RBP28.86■■■□□ 2.21
TSSC4-203ENST00000380996 CFAP70Q5T0N1 1121 aa28.86■■■□□ 2.21
TSSC4-203ENST00000380996 SLIT1O75093 1534 aa28.84■■■□□ 2.21
TSSC4-203ENST00000380996 ARHGAP23Q9P227 1491 aa28.84■■■□□ 2.21
TSSC4-203ENST00000380996 ZNF142P52746 1687 aaPredicted RBP28.84■■■□□ 2.21
TSSC4-203ENST00000380996 KIAA1210Q9ULL0 1709 aa28.83■■■□□ 2.21
TSSC4-203ENST00000380996 TXNDC2Q86VQ3 553 aa28.83■■■□□ 2.21
TSSC4-203ENST00000380996 HSPA5P11021 654 aaKnown RBP28.79■■■□□ 2.2
TSSC4-203ENST00000380996 USP47Q96K76 1375 aa28.79■■■□□ 2.2
TSSC4-203ENST00000380996 LTKP29376 864 aa28.79■■■□□ 2.2
TSSC4-203ENST00000380996 LAMC1P11047 1609 aa28.77■■■□□ 2.2
TSSC4-203ENST00000380996 PLEKHG1Q9ULL1 1385 aa28.75■■■□□ 2.19
TSSC4-203ENST00000380996 ANKLE2Q86XL3 938 aa28.75■■■□□ 2.19
TSSC4-203ENST00000380996 BCANQ96GW7 911 aa28.75■■■□□ 2.19
TSSC4-203ENST00000380996 SETBP1Q9Y6X0 1596 aa28.75■■■□□ 2.19
TSSC4-203ENST00000380996 SCAF11Q99590 1463 aaKnown RBP28.73■■■□□ 2.19
TSSC4-203ENST00000380996 HIRIP3Q9BW71 556 aaPredicted RBP28.71■■■□□ 2.19
TSSC4-203ENST00000380996 SENP3Q9H4L4 574 aaPredicted RBP28.71■■■□□ 2.19
TSSC4-203ENST00000380996 ALKQ9UM73 1620 aa28.71■■■□□ 2.19
TSSC4-203ENST00000380996 TMEM132EQ6IEE7 984 aa28.69■■■□□ 2.18
TSSC4-203ENST00000380996 EIF3AQ14152 1382 aaKnown RBP28.68■■■□□ 2.18
TSSC4-203ENST00000380996 ADGRB1O14514 1584 aa28.68■■■□□ 2.18
TSSC4-203ENST00000380996 ST20-MTHFSA0A0A6YYL1 179 aa28.67■■■□□ 2.18
TSSC4-203ENST00000380996 NRXN3Q9Y4C0 1643 aa28.63■■■□□ 2.17
TSSC4-203ENST00000380996 ADAMTS13Q76LX8 1427 aa28.62■■■□□ 2.17
TSSC4-203ENST00000380996 TBX22Q9Y458 520 aa28.62■■■□□ 2.17
TSSC4-203ENST00000380996 TRAK1Q9UPV9 953 aa28.61■■■□□ 2.17
TSSC4-203ENST00000380996 IQGAP1P46940 1657 aa28.61■■■□□ 2.17
TSSC4-203ENST00000380996 YTHDC2Q9H6S0 1430 aaKnown RBP28.59■■■□□ 2.17
TSSC4-203ENST00000380996 ASXL1Q8IXJ9 1541 aa28.59■■■□□ 2.17
TSSC4-203ENST00000380996 SLC26A8Q96RN1 970 aa28.59■■■□□ 2.17
TSSC4-203ENST00000380996 MED14O60244 1454 aa28.58■■■□□ 2.17
TSSC4-203ENST00000380996 SLC24A1O60721 1099 aa28.58■■■□□ 2.17
TSSC4-203ENST00000380996 METP08581 1390 aa28.58■■■□□ 2.17
TSSC4-203ENST00000380996 LRPPRCP42704 1394 aaKnown RBP28.57■■■□□ 2.16
TSSC4-203ENST00000380996 STK26Q9P289 416 aa28.57■■■□□ 2.16
TSSC4-203ENST00000380996 DIP2AQ14689 1571 aa28.56■■■□□ 2.16
TSSC4-203ENST00000380996 LMTK3Q96Q04 1460 aa28.55■■■□□ 2.16
TSSC4-203ENST00000380996 NCKAP5LQ9HCH0 1330 aa28.54■■■□□ 2.16
TSSC4-203ENST00000380996 SETD1AO15047 1707 aaKnown RBP28.54■■■□□ 2.16
TSSC4-203ENST00000380996 NPHP4O75161 1426 aaPredicted RBP28.54■■■□□ 2.16
TSSC4-203ENST00000380996 ABCC11Q96J66 1382 aa28.54■■■□□ 2.16
TSSC4-203ENST00000380996 CENPJQ9HC77 1338 aaPredicted RBP28.54■■■□□ 2.16
TSSC4-203ENST00000380996 TESK2Q96S53 571 aa28.53■■■□□ 2.16
TSSC4-203ENST00000380996 HSPA2P54652 639 aa28.52■■■□□ 2.16
TSSC4-203ENST00000380996 TMF1P82094 1093 aa28.5■■■□□ 2.15
TSSC4-203ENST00000380996 PIK3R4Q99570 1358 aa28.5■■■□□ 2.15
TSSC4-203ENST00000380996 POLR1AO95602 1720 aaPredicted RBP28.48■■■□□ 2.15
TSSC4-203ENST00000380996 SIRT1Q96EB6 747 aa28.48■■■□□ 2.15
TSSC4-203ENST00000380996 POGKQ9P215 609 aa28.48■■■□□ 2.15
TSSC4-203ENST00000380996 SBNO2Q9Y2G9 1366 aa28.48■■■□□ 2.15
TSSC4-203ENST00000380996 DLC1Q96QB1 1528 aa28.47■■■□□ 2.15
TSSC4-203ENST00000380996 C11orf95C9JLR9 678 aaPredicted RBP28.47■■■□□ 2.15
TSSC4-203ENST00000380996 WASHC2AQ641Q2 1341 aa28.46■■■□□ 2.15
TSSC4-203ENST00000380996 TECPR2O15040 1411 aa28.46■■■□□ 2.15
TSSC4-203ENST00000380996 CCDC7Q96M83 1385 aa28.45■■■□□ 2.15
TSSC4-203ENST00000380996 PRAM1Q96QH2 718 aa28.45■■■□□ 2.15
TSSC4-203ENST00000380996 KIF7Q2M1P5 1343 aa28.45■■■□□ 2.14
TSSC4-203ENST00000380996 CDCA8Q53HL2 280 aa28.44■■■□□ 2.14
TSSC4-203ENST00000380996 ARHGEF28Q8N1W1 1705 aaKnown RBP28.43■■■□□ 2.14
TSSC4-203ENST00000380996 AMOTL2Q9Y2J4 779 aa28.43■■■□□ 2.14
TSSC4-203ENST00000380996 FAM135BQ49AJ0 1406 aa28.42■■■□□ 2.14
TSSC4-203ENST00000380996 PTPRUQ92729 1446 aa28.4■■■□□ 2.14
TSSC4-203ENST00000380996 SAFB2Q14151 953 aaKnown RBP eCLIP28.38■■■□□ 2.13
TSSC4-203ENST00000380996 KNDC1Q76NI1 1749 aa28.38■■■□□ 2.13
TSSC4-203ENST00000380996 DISP3Q9P2K9 1392 aa28.38■■■□□ 2.13
TSSC4-203ENST00000380996 POLR3GLQ9BT43 218 aa28.38■■■□□ 2.13
TSSC4-203ENST00000380996 CPS1P31327 1500 aa28.37■■■□□ 2.13
TSSC4-203ENST00000380996 DDX10Q13206 875 aaKnown RBP28.37■■■□□ 2.13
TSSC4-203ENST00000380996 DIEXFQ68CQ4 756 aaKnown RBP28.37■■■□□ 2.13
TSSC4-203ENST00000380996 WAPLQ7Z5K2 1190 aa28.37■■■□□ 2.13
TSSC4-203ENST00000380996 QRICH2Q9H0J4 1663 aa28.35■■■□□ 2.13
TSSC4-203ENST00000380996 PTCH1Q13635 1447 aa28.35■■■□□ 2.13
TSSC4-203ENST00000380996 ROBO2Q9HCK4 1378 aa28.35■■■□□ 2.13
TSSC4-203ENST00000380996 EVC2Q86UK5 1308 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms