RNA–Protein interactions for RNA: ENST00000380875.7

FREM1-201, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 1 (best)

Gene FREM1, Length 6,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-201ENST00000380875 GBP4Q96PP9 640 aa11.39□□□□□ -0.59
FREM1-201ENST00000380875 CADPSQ9ULU8 1353 aa11.39□□□□□ -0.59
FREM1-201ENST00000380875 SYAP1Q96A49 352 aaPredicted RBP11.39□□□□□ -0.59
FREM1-201ENST00000380875 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.39□□□□□ -0.59
FREM1-201ENST00000380875 PAXIP1Q6ZW49 1069 aaPredicted RBP11.38□□□□□ -0.59
FREM1-201ENST00000380875 RCAN3Q9UKA8 241 aa11.38□□□□□ -0.59
FREM1-201ENST00000380875 R3HCC1Q9Y3T6 440 aaKnown RBP11.38□□□□□ -0.59
FREM1-201ENST00000380875 GPRASP1Q5JY77 1395 aa11.38□□□□□ -0.59
FREM1-201ENST00000380875 KANK4Q5T7N3 995 aaPredicted RBP11.38□□□□□ -0.59
FREM1-201ENST00000380875 WWC2Q6AWC2 1192 aa11.38□□□□□ -0.59
FREM1-201ENST00000380875 KIF6Q6ZMV9 814 aa11.38□□□□□ -0.59
FREM1-201ENST00000380875 RIC3Q7Z5B4 369 aa11.38□□□□□ -0.59
FREM1-201ENST00000380875 PCMTD1Q96MG8 357 aaPredicted RBP11.38□□□□□ -0.59
FREM1-201ENST00000380875 IFIT2P09913 472 aaKnown RBP11.37□□□□□ -0.59
FREM1-201ENST00000380875 MCTP1Q6DN14 999 aa11.37□□□□□ -0.59
FREM1-201ENST00000380875 DIAPH3Q9NSV4 1193 aa11.37□□□□□ -0.59
FREM1-201ENST00000380875 PRDM2Q13029 1718 aa11.37□□□□□ -0.59
FREM1-201ENST00000380875 RAPGEF2Q9Y4G8 1499 aa11.36□□□□□ -0.59
FREM1-201ENST00000380875 TSR1Q2NL82 804 aaKnown RBP11.36□□□□□ -0.59
FREM1-201ENST00000380875 NOP58Q9Y2X3 529 aaKnown RBP11.36□□□□□ -0.59
FREM1-201ENST00000380875 G3BP1Q13283 466 aaKnown RBP eCLIP11.35□□□□□ -0.59
FREM1-201ENST00000380875 TRDNQ13061 729 aa11.35□□□□□ -0.59
FREM1-201ENST00000380875 CCDC47Q96A33 483 aaKnown RBP11.35□□□□□ -0.59
FREM1-201ENST00000380875 FANCD2Q9BXW9 1451 aa11.35□□□□□ -0.59
FREM1-201ENST00000380875 PTMSP20962 102 aa11.35□□□□□ -0.59
FREM1-201ENST00000380875 RBM5P52756 815 aaKnown RBP eCLIP11.35□□□□□ -0.59
FREM1-201ENST00000380875 NEUROD6Q96NK8 337 aa11.34□□□□□ -0.59
FREM1-201ENST00000380875 PDE3BQ13370 1112 aa11.34□□□□□ -0.59
FREM1-201ENST00000380875 TXNDC2Q86VQ3 553 aa11.34□□□□□ -0.59
FREM1-201ENST00000380875 ABTB2Q8N961 1025 aa11.34□□□□□ -0.59
FREM1-201ENST00000380875 GZF1Q9H116 711 aaPredicted RBP11.34□□□□□ -0.59
FREM1-201ENST00000380875 PAF1Q8N7H5 531 aa11.34□□□□□ -0.59
FREM1-201ENST00000380875 DIAPH1O60610 1272 aaKnown RBP11.33□□□□□ -0.59
FREM1-201ENST00000380875 ANO2Q9NQ90 1003 aa11.33□□□□□ -0.59
FREM1-201ENST00000380875 TSPYL4Q9UJ04 414 aa11.33□□□□□ -0.59
FREM1-201ENST00000380875 CPLX2Q6PUV4 134 aaKnown RBP11.33□□□□□ -0.6
FREM1-201ENST00000380875 PANK3Q9H999 370 aa11.33□□□□□ -0.6
FREM1-201ENST00000380875 NLRP6P59044 892 aa11.33□□□□□ -0.6
FREM1-201ENST00000380875 TOM1L2Q6ZVM7 507 aa11.33□□□□□ -0.6
FREM1-201ENST00000380875 BCL2L13Q9BXK5 485 aa11.33□□□□□ -0.6
FREM1-201ENST00000380875 SLKQ9H2G2 1235 aaPredicted RBP11.33□□□□□ -0.6
FREM1-201ENST00000380875 ST18O60284 1047 aa11.32□□□□□ -0.6
FREM1-201ENST00000380875 FKBP5Q13451 457 aaPredicted RBP11.32□□□□□ -0.6
FREM1-201ENST00000380875 RTN4Q9NQC3 1192 aaKnown RBP11.32□□□□□ -0.6
FREM1-201ENST00000380875 CPLX1O14810 134 aa11.32□□□□□ -0.6
FREM1-201ENST00000380875 ANKRD45Q5TZF3 282 aa11.32□□□□□ -0.6
FREM1-201ENST00000380875 DDX54Q8TDD1 881 aaKnown RBP11.32□□□□□ -0.6
FREM1-201ENST00000380875 TCERG1O14776 1098 aaKnown RBP11.32□□□□□ -0.6
FREM1-201ENST00000380875 GOLGA6L1Q8N7Z2 621 aa11.32□□□□□ -0.6
FREM1-201ENST00000380875 CHMP4CQ96CF2 233 aa11.32□□□□□ -0.6
FREM1-201ENST00000380875 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.31□□□□□ -0.6
FREM1-201ENST00000380875 WASHC4Q2M389 1173 aa11.31□□□□□ -0.6
FREM1-201ENST00000380875 RAB3GAP2Q9H2M9 1393 aa11.31□□□□□ -0.6
FREM1-201ENST00000380875 SMG6Q86US8 1419 aaKnown RBP11.31□□□□□ -0.6
FREM1-201ENST00000380875 IBSPP21815 317 aaPredicted RBP11.31□□□□□ -0.6
FREM1-201ENST00000380875 FOSBP53539 338 aa11.31□□□□□ -0.6
FREM1-201ENST00000380875 DHX57Q6P158 1386 aaKnown RBP11.3□□□□□ -0.6
FREM1-201ENST00000380875 KDM4AO75164 1064 aa11.3□□□□□ -0.6
FREM1-201ENST00000380875 ATP2B2Q01814 1243 aa11.3□□□□□ -0.6
FREM1-201ENST00000380875 L3MBTL2Q969R5 705 aa11.3□□□□□ -0.6
FREM1-201ENST00000380875 MYO15BQ96JP2 1530 aa11.3□□□□□ -0.6
FREM1-201ENST00000380875 HMOX1P09601 288 aa11.3□□□□□ -0.6
FREM1-201ENST00000380875 RUFY2Q8WXA3 655 aa11.29□□□□□ -0.6
FREM1-201ENST00000380875 FOXD4L6Q3SYB3 417 aaPredicted RBP11.29□□□□□ -0.6
FREM1-201ENST00000380875 FOXD4L3Q6VB84 417 aaPredicted RBP11.29□□□□□ -0.6
FREM1-201ENST00000380875 TIMELESSQ9UNS1 1208 aa11.29□□□□□ -0.6
FREM1-201ENST00000380875 TPM1P09493 284 aa11.29□□□□□ -0.6
FREM1-201ENST00000380875 VPS8Q8N3P4 1428 aa11.29□□□□□ -0.6
FREM1-201ENST00000380875 ODF2Q5BJF6 829 aa11.28□□□□□ -0.6
FREM1-201ENST00000380875 MROH2BQ7Z745 1585 aa11.28□□□□□ -0.6
FREM1-201ENST00000380875 RIPK4P57078 832 aa11.28□□□□□ -0.6
FREM1-201ENST00000380875 CT47A1Q5JQC4 288 aaPredicted RBP11.28□□□□□ -0.6
FREM1-201ENST00000380875 TATP17735 454 aaPredicted RBP11.27□□□□□ -0.6
FREM1-201ENST00000380875 CABP2Q9NPB3 220 aa11.27□□□□□ -0.6
FREM1-201ENST00000380875 CABP4P57796 275 aa11.27□□□□□ -0.61
FREM1-201ENST00000380875 BICDL1Q6ZP65 573 aa11.27□□□□□ -0.61
FREM1-201ENST00000380875 THEMISQ8N1K5 641 aaPredicted RBP11.27□□□□□ -0.61
FREM1-201ENST00000380875 ARID3AQ99856 593 aa11.26□□□□□ -0.61
FREM1-201ENST00000380875 MIA2Q96PC5 1412 aa11.26□□□□□ -0.61
FREM1-201ENST00000380875 ST20-MTHFSA0A0A6YYL1 179 aa11.26□□□□□ -0.61
FREM1-201ENST00000380875 KIF15Q9NS87 1388 aa11.26□□□□□ -0.61
FREM1-201ENST00000380875 ARHGAP5Q13017 1502 aa11.26□□□□□ -0.61
FREM1-201ENST00000380875 CNNM1Q9NRU3 951 aa11.26□□□□□ -0.61
FREM1-201ENST00000380875 ZKSCAN1P17029 563 aaPredicted RBP11.25□□□□□ -0.61
FREM1-201ENST00000380875 ZFYVE27Q5T4F4 411 aa11.25□□□□□ -0.61
FREM1-201ENST00000380875 NLRP13Q86W25 1043 aa11.25□□□□□ -0.61
FREM1-201ENST00000380875 ANKLE2Q86XL3 938 aa11.25□□□□□ -0.61
FREM1-201ENST00000380875 PLEKHO1Q53GL0 409 aaPredicted RBP11.25□□□□□ -0.61
FREM1-201ENST00000380875 CCER2I3L3R5 266 aa11.25□□□□□ -0.61
FREM1-201ENST00000380875 TTLL12Q14166 644 aaPredicted RBP11.25□□□□□ -0.61
FREM1-201ENST00000380875 BRMS1Q9HCU9 246 aa11.25□□□□□ -0.61
FREM1-201ENST00000380875 TBC1D2BQ9UPU7 963 aa11.25□□□□□ -0.61
FREM1-201ENST00000380875 PHLDB1Q86UU1 1377 aa11.24□□□□□ -0.61
FREM1-201ENST00000380875 MPHOSPH10O00566 681 aaKnown RBP11.24□□□□□ -0.61
FREM1-201ENST00000380875 PHF14O94880 888 aa11.24□□□□□ -0.61
FREM1-201ENST00000380875 ZKSCAN2Q63HK3 967 aa11.24□□□□□ -0.61
FREM1-201ENST00000380875 SLC3A2P08195 630 aaKnown RBP11.24□□□□□ -0.61
FREM1-201ENST00000380875 EPS15P42566 896 aa11.24□□□□□ -0.61
FREM1-201ENST00000380875 RALYLQ86SE5 291 aaKnown RBP11.24□□□□□ -0.61
FREM1-201ENST00000380875 ANKRD20A12PQ8NF67 263 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms